Betta splendens (Siamese fighting fish): 114845933
Help
Entry
114845933 CDS
T08231
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X2
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03020
RNA polymerase
bspl04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114845933 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
114845933 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bspl03021
]
114845933 (polr3a)
Enzymes [BR:
bspl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114845933 (polr3a)
Transcription machinery [BR:
bspl03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
114845933 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
114845933
NCBI-ProteinID:
XP_028990370
UniProt:
A0A6P7L8K9
LinkDB
All DBs
Position
19:12013829..12025229
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTKHTPLPYGVLDHRM
GTSEKDRPCLTCGKNLADCLGHYGYLDLELPCFHVGYFKAIIGILQMICKTCSSILLTKE
EKLQFRDVLKRPNLPYLQKRGLKKKISEKCRKRTVCLNCSAFNGPVKKCGLLKIIHEKYK
TTKKVVDVFVSDFLQSFDLAIEHNKVIEPLLNRAQENLNPLVVLNLFKRIPQEDVLLLLM
NPEAGKPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPERVNKANMELMRKLVRNGPEVHPGANF
IQNRYTQIKRFLKYGNREKIAQELRIGDIVERHLIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRSKACQIVASILVGKDDRIRIALPRPAIMKPMALWTGKQI
FSLILKPSKECPVKANLRTKGKQYCGKGEDLCANDSFVSIHNSELMCGSMDKGTLGSGSK
NNIFYILLRDWGQLEAANAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKQDLLDDG
YEKCDEYIEALQTGKLQQQPGCTAEETLEALILRELSVIRDRAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTSDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDSIRAVYACSNEPALSQNELVLAADAVMKRADFLC
CRDSFLEEIKKFIKSTSERIKKTRDKYGINDNGTTEPKVLYQLDRITPTQLEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNI
STPIITAHLDVEDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYCICMSKLRVKPGDIAVHGEAVVCVSPRENNKSSMYYVLQSLKEELPKVV
VQGIPEVARAVIHIDEQSGKNKYKLLVEGDNLRAVMATHGVNGSRTTSNNTYEVEKTLGI
EAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADKDPFPVQRPLFFD
NPDFHTSLVT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagtttagagagacggatgtggctaaaaaaataagccacatctgcttt
gggatgaagtctgcagagcagatgcgtcagcaggcccacatccaggtggtcagtaaaaac
ctgtacagccaggacaccaagcacacgccactgccctacggagtgttggaccaccgtatg
ggcaccagtgaaaaagacagaccatgtttaacatgtgggaagaatctggcggactgttta
ggacattatggctatctggatctggagcttccatgttttcatgttggttattttaaagcc
atcataggcatcctacagatgatttgcaagacatgttcaagcattttgctgacaaaggag
gagaaactgcagttcagagatgtcctgaagaggccgaacctgccttatctccagaaacga
gggctgaagaagaagatctctgaaaaatgccgcaaaaggacagtttgtctgaattgttcg
gctttcaacgggccagtgaaaaagtgtggcctgcttaaaatcatccatgagaagtataaa
acaaccaagaaggtggtagatgtgtttgtgtcagatttcctgcagtcctttgaccttgca
attgagcacaacaaagtgatcgagcctcttctgaacagggcacaggagaacctgaaccca
ttggtggtgctaaacctatttaagaggatccctcaggaagacgtcctgctgctgctgatg
aaccccgaggcagggaaacccgcagacctcatcctcacccgtcttctggttcctccactc
tgcatacggccctctgtggtgagcgacctgaagtcgggcacaaacgaggatgacctcaca
atgaagcttacggaaatcatcttcctcaatgatgtcatcaaaaagcatcgcatgacaggt
gccaaaacacagatgatcatggaggactgggacttcctccaactacagtgcgctctttac
attaacagtgaactgtctggtatcccactgaacatggcacctaaaaaatggaccagaggc
tttgtgcaaagactcaaggggaagcaaggtcgattcaggggaaacctttccgggaaaaga
gtggacttctccgggagaactgtgatttctccagaccctaatctgaggatcgatgaggtg
gccgtccctgtgcacgtggccaaaatcctgacatacccagaaagggtgaacaaagcaaat
atggaactaatgaggaaacttgttcgcaacggcccagaagttcaccccggagctaacttc
atccagaaccgttacacacagataaaaaggtttttaaaatatggaaatcgtgagaaaatt
gctcaggagctaagaattggtgacattgtagaaaggcacctcatcgatggagacatcgtc
ctcttcaatcggcagccgtctctgcacaaacttagcatcatggcccatattgccagggtc
aaacctcacaggaccttccgcttcaacgagtgcgtgtgcaccccgtacaatgctgacttt
gacggcgacgaaatgaaccttcatctacctcaaacggaggaggccaaagctgaagccctg
gtcctgatggggacaaaagctaatctcgtcactccgaggaacggtgaacctctgattgct
gctattcaggactttctgacaggagcttaccttttgacactcaaggacaccttctttgac
agatccaaagcctgccagatcgttgcatcgatcctcgtgggcaaagatgacagaatcagg
atcgccctcccacgtccggctattatgaagcccatggctctgtggacaggaaaacagatc
ttcagtctgattctgaagccaagtaaggaatgtccagtcaaggccaatctgcgaaccaag
ggcaaacagtattgtggcaaaggagaggatctctgtgccaacgactcgtttgtttcgatc
cacaacagcgagctaatgtgcggcagcatggataagggcactttgggatctggctccaag
aacaacatcttctacatcctgttgagagactggggacagctggaggcggccaacgccatg
tcccgcctggcgagactcgctccagtgtatctctccaaccggggcttttccatcggcatt
ggtgatgtgacaccgggtcagggtctgctgaaggccaaacaggacctgctggacgacggc
tacgagaagtgtgatgaatacattgaagctctgcaaacgggaaagctgcagcagcagccg
ggctgcacggcagaggaaaccctggaggcgctcatcttgagagagttgtccgtgatcaga
gaccgagcaggcagcgcttgcctcagggagctcgacaagagcaacagccctctgatcatg
gctctttgtggttctaaaggatccttcattaatatctctcagatgatcgcctgcgtgggc
cagcaggccataagtggttctcgagtacccgatggttttgagaatcgctccttgcctcac
tttgaaaagcactcaaaactgcctgctgctaaaggttttgtggccaacagcttctattct
ggcctgacgcccacggagttcttctttcacaccatggctggcagggagggtctggtggac
accgctgtgaaaactgcagagactggatacatgcagaggcgactggtgaagtctctggag
gacttgtgctcgcagtatgatctgacagtacgcagttccaccagcgacatcatccagttc
atttatggtggcgatggtctggatcctgctgcgatggagggaaaggacgagccactggag
ttcaagagagtcctggacagcatcagggctgtttacgcgtgttcaaacgagccggcgctc
agtcagaatgaactggtgctcgctgcagacgcagtcatgaagagagcggacttcctttgc
tgcagagacagcttcttggaggagataaagaaattcattaaaagcacttcggaaaggatc
aagaagaccagagacaagtatggcatcaatgacaatggaaccactgagcctaaagtcctc
tatcagctggatcgcatcactcccacacagctggagaagttccttgaaacctgcagagac
aagtacatgagagctcagatggagccaggctcggcagtgggagctctgtgtgcccagagc
atcggagagcccggtactcagatgaccctgaaaaccttccacttcgctggtgtggcatcc
atgaatatcactctgggcgtgcctcgtattaaagagatcattaacgcctccaaaaacatc
agcacccctataatcactgctcatttggatgtggaagacgacgccgactttgccaggctg
gtgaagggcaggatcgagaaaacacttctgggagagatttctgagtacattgaagaggtt
tttctacccgatgactgttttatcctggtcaaattgtcgctggagaggatcaggcttctg
cgactggaggtaaatgcggagacggtgcgttactgcatctgcatgtcaaagctgcgagtg
aaacctggggacatcgcggtgcacggcgaggcggtggtgtgcgtgtccccacgagagaac
aacaaaagctccatgtactatgtcctgcaatcattaaaggaagagcttcctaaggtggtg
gtacaaggaatacctgaggtcgctcgtgctgtcatccacatcgacgaacagagcggcaag
aacaagtacaaactcctggtggagggagacaatttaagagctgtcatggcaacgcatggc
gtgaatggaagccggaccacgtcgaacaatacatacgaggttgagaagaccttgggtatt
gaggctgctagatccaccatcatcaatgagattcagtacactatggtgaaccacggcatg
agcattgaccggcgccacgttatgctcctcgctgacctgatgtcctataagggtgagatc
ctggggatcaccaggtttggtttagccaaaatgaaggagagcgtcctcatgttggcttcc
tttgagaaaacagctgatcatctcttcgacgctgcctactttggacagaaggactccgtc
tgcggtgtgtctgagtgcattattatggggattccaatgaatattggaacaggactgttt
aaactcctgcacaaggctgacaaagatccatttccagtccaaagacctctctttttcgac
aacccagacttccatacatctctggtcacgtag
DBGET
integrated database retrieval system
