Betta splendens (Siamese fighting fish): 114845965 Help Entry 114845965         CDS       T08231                                  Symbol col1a1b Name (RefSeq) collagen, type I, alpha 1b   KO K06236   collagen type I alpha Organism bspl  Betta splendens (Siamese fighting fish) Pathway bspl04510   Focal adhesion bspl04512   ECM-receptor interaction bspl04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:bspl00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     114845965 (col1a1b)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     114845965 (col1a1b)   09142 Cell motility    04820 Cytoskeleton in muscle cells     114845965 (col1a1b)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:bspl00536]     114845965 (col1a1b) Glycosaminoglycan binding proteins [BR:bspl00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    114845965 (col1a1b) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC TILa VWC2L_2nd Motif Other DBs NCBI-GeneID:  114845965 NCBI-ProteinID:  XP_028990436 UniProt:  A0A6P7L713 LinkDB All DBs Position 19:14350446..14363396 Genome browser AA seq 1450 aa AA seqDB search MFSFVDIRLALLLSAAALLVRGQGEDDRTFGSCTLDGQLYNDKDVWKPEPCQICVCDSGN VMCDDVICEDSSDCADPIIPEGECCPICPDSDDGAVTPDYQEPTKGENGPKGDQGPPGVP GNDGLPGQNGLPGPPGPPGPPGLGGNYSPQMSYSDPSKSSGPPVPGPMGPMGPRGTPGPS GPSGPQGFTGPPGEPGEPGAAGPMGSRGPAGPPGKNGDDGEPGKAGRPGERGAAGPQGAR GFPGTPGLPGIKGHRGFNGLDGAKGDTGPAGPKGEPGASGENGVPGAMGARGLPGERGRP GPPGPSGARGNDGNTGPAGPPGPTGPAGPPGFPGGAGAKGETGAQGGRGAEGPQGARGEP GNPGPAGPAGAAGAPGSDGSPGAKGSTGTVGNAGAPGFPGARGPAGAQGAVGAPGPKGNN GDHGPSGPKGEPGAKGEPGPAGVQGLPGPSGEEGKRGPRGEPGGAGPRGPPGERGAPGPR GLPGSDGGAGGKGAPGERGAPGPMGPQGATGESGTPGGPGAPGSKGVTGSPGSPGPDGKS GPAGAPGQDGRAGPPGPAGSRGQPGVMGFPGPKGPNGESGKPGERGPAGAAGPVGAPGKD GDVGAPGPSGVAGPAGEKGEQGPAGPPGFQGLPGPQGATGETGKPGEQGVPGEAGPNGPS GPRGDRGFPGERGAPGAGGPMGPRGAPGPAGNDGVKGEPGAPGGPGAQGLTGMQGMPGER GPSGLPGTKGERGDGGGKGADGAAGKDGVRGLTGPIGLPGPPGPQGEKGEGGPVGVAGPT GPRGSPGERGETGPAGPAGFAGPPGADGQPGNKGETGDTGPKGDAGPAGPPGPVGSSGPQ GPAGAPGPKGARGGAGAPGAVGYPGSVGRVGPPGPAGVAGPPGPAGPAGKDGARGNRGET GPAGRPGEAGAAGPPGPSGEKGSPGADGSPGPAGILGPPGVSGQRGIVGLPGQRGERGFS GLPGPAGEPGKQGPSGLVGERGPPGPAGPPGLSGATGEAGREGSAGHDGAPGRDGPPGPK GDRGEPGQSGPPGPPGAPGAPGFVGPSGKNGDRGETGPAGPAGPAGPAGVRGPAGPAGAK GDRGETGEAGERGHKGHRGFSGMQGLPGTAGPAGERGPAGASGPAGPRGPAGSNGSPGKD GVNGLPGPIGPPGPRGRNGEMGPAGPPGPPGPAGLPGAPGAAFEFNIQPAQEKAPDPLRG GYRADDPNMMRDRDMEVDTTLKTLTQRVEKIRSPDGTQKNPARMCRDLRMCQPEWKSGTY WVDPNQGSPLDAIKVHCNMETGETCIYPSQSSIPMKNWYLSKNIREKKHIWFSESMTGGF QFQYGSDGADAEDVNIQMTFMRLMSNQASQNVTYHCKNSIAYMDSATGNLKKALLLQGSN DIEIRAEGNSRFTYSVNEDGCTTHTGSWGKTVIDYKTSKTSRLPIIDIAPMDVGAPDQEF GVEVGPVCFL NT seq 4353 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggatattcggttagcgcttttgctcagcgcagcagcgcttttggtc agaggtcaaggcgaggatgataggacattcggcagctgcacattagacggacagttgtac aatgacaaggacgtgtggaaaccagagccctgccagatctgcgtgtgtgacagtggaaac gtcatgtgcgacgacgtgatctgcgaggactcgtccgactgcgccgaccccatcatcccg gagggagagtgctgccccatctgccccgactccgatgatggagccgtgactccagattac caggagccaacaaagggagaaaatggccccaagggagaccagggtcctcctggtgttcct ggcaacgatggactccctggacagaatggccttcctgggccccctggcccccctggcccc cctggccttggcggaaactactctcctcagatgagctattctgacccatccaaatccagc ggcccacctgttcctggcccaatgggtcctatgggtccccgcggtactcctggcccctct ggtccctctggtcctcagggattcactggacctcctggagagcccggtgagcctggagca gctggtcccatgggttcccgtggtcctgctggtcccccaggaaagaacggagatgatggt gagcccggcaaagctggtcgccctggtgagcgtggagctgccggccctcagggagctcgc ggattccctggaactcctggactccccggcatcaagggacacagaggattcaacggtctg gatggagctaagggagacactggacctgctggacctaagggagagcctggtgcctctggt gagaacggtgtccctggtgccatgggtgctcgtggccttcctggtgagagaggccgccct ggacctcccggaccctctggcgctcgtggtaatgacggcaacactggtcctgctggaccc ccaggacctaccggacctgctggtcctcctggattccccggtggtgctggtgcaaaggga gagactggtgctcagggaggccgtggagccgagggacctcagggagcccgtggtgagcct ggcaaccccggacccgccggtcctgctggagctgctggcgcccctggatctgatggctct cctggtgctaagggtagtactggtactgttggtaatgctggtgctcctggtttccctggt gctcgtggtcctgctggagctcagggagctgttggtgctcctggacccaagggtaacaat ggtgaccatggcccctctggtcctaagggagagcctggtgccaagggagagcctggtccc gctggagttcagggacttcctggcccctctggtgaggaaggaaagagaggtcctcgtgga gagcctggtggtgctggaccccgtggaccccctggagagcgtggtgctcctggtcctcgt ggtttgcctggttctgatggtggtgctggtggcaagggagcccctggtgagcgtggtgcc ccaggcccaatgggtcctcagggagccactggtgagtctggaacccctggtggtccaggt gcacctggatccaagggtgtgactggtagtcctggaagccctggccctgatggcaaatct ggacctgctggtgctcctggacaagatggccgtgctggacctcctggcccagcaggatcc agaggacagcctggagttatgggattccctgggcccaagggacctaatggtgagtctggt aagcctggcgagagaggtcctgctggtgccgctggccctgttggtgctcctggcaaagat ggtgacgttggagctcctggaccctctggtgttgctggacctgctggagagaagggtgag cagggacctgctggtcctcctggattccagggtcttcccggacctcaaggtgctactgga gagactggcaagcctggtgagcagggtgttcctggtgaggctggacccaatggcccttct ggaccaagaggtgacagaggtttccctggtgagcgtggtgctccaggtgccggtggccca atgggacctcgtggtgcccctggaccagctggtaacgatggtgttaagggagagcctggt gctcctggtggacctggtgctcagggtttgactggtatgcagggaatgcctggtgagcgt ggaccttctggtctccccggaaccaagggagagagaggagacggcggtggcaagggagct gatggcgccgctggcaaagatggtgtccgtggtctgactggacctattggactacctgga cctcctggtcctcagggtgagaagggtgaggggggccctgttggagttgctggacccact ggtcctcgtggttcccctggtgagcgtggagagactggccctgctggacctgctggattt gctgggcctcctggtgctgatggtcagcctggcaacaagggagagactggtgacactgga cctaagggagatgctggtcccgctggacctcctggacctgttggatcttctggtcctcag ggacctgctggtgctcctggacccaaaggtgctcgtggtggtgctggtgcccctggtgct gttggttaccctggatctgttggaagagttggaccccctggccctgctggagttgctgga cctcctggacctgctggacctgctggcaaagatggagcaagaggaaaccgtggtgagact ggccctgctggtcgccctggtgaggctggtgctgctggacctccaggacccagtggagag aagggatctcctggtgctgatggatccccaggtcccgctggtatccttggacccccaggt gtttctggacagcgtggtattgtaggtctccctggacagcgtggagagcgtggtttctct ggtctgcctggaccggctggtgagcctggaaagcagggaccttctggacttgttggtgag cgtggaccccctggacctgctggtccccctggactgtctggtgctactggagaggctggt cgtgagggatctgctggtcacgatggtgcccctggtcgcgatggacctcctggccctaag ggagaccgtggtgagcctggccagtctggaccccctggacctcctggtgcacccggtgcc cctggatttgttggaccgtctggcaagaatggtgaccgtggagagactggtcccgctggt cctgctggtcctgcaggccctgctggtgtccgtggacctgctggccctgctggtgccaag ggagacagaggtgagactggtgaggctggagagagaggccacaagggacacagaggattc agtggcatgcagggtctgcctggaactgctggacctgctggagagagaggacctgctggt gcctctggacctgccggacctagaggacctgctggatctaatggttcccctggtaaggat ggtgtgaacggcctgcccggacccattggacctcctggacctcgtggtcgcaatggagag atgggacctgctggtcctccaggacctcctggacccgctggactccctggagctcctggc gcagcatttgagttcaacatccagcctgctcaggagaaggcccccgatcccctgcgcgga ggctaccgtgctgatgaccccaacatgatgcgcgaccgcgacatggaggttgacaccacc ctcaagactctgacccagagggttgagaagatccgtagccccgatggcacccagaagaac cctgctcgcatgtgccgtgacctgagaatgtgccagcctgagtggaagagcggcacctac tgggtcgatcccaaccagggctctcctctggatgccatcaaggtccactgcaacatggag actggtgagacctgcatctaccccagccagtccagcatccccatgaagaactggtacctc agcaagaacatcagagagaagaagcacatctggttcagcgagtccatgaccggtggattc cagttccagtatggcagcgatggagctgatgctgaggacgtcaacatccagatgaccttc atgcgcctgatgtccaaccaggcctctcagaacgtcacgtaccactgcaagaacagcatc gcctacatggactccgccactggcaacctgaagaaggccctgctcctccagggatccaac gacatcgagatcagagccgagggcaacagccgcttcacatacagcgtcaacgaggatggc tgcacgacacacactggctcatggggcaagacagtcatcgactacaagacatcaaaaaca agccgcctgcccatcattgacattgctcctatggatgttggtgcacctgatcaggaattt ggcgttgaagtgggccctgtttgcttcttgtaa

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