Betta splendens (Siamese fighting fish): 114846576
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Entry
114846576 CDS
T08231
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03013
Nucleocytoplasmic transport
bspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114846576
03015 mRNA surveillance pathway
114846576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114846576
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114846576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
LPD16
Nup35_RRM_2
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
114846576
NCBI-ProteinID:
XP_028991464
UniProt:
A0A6P7LD88
LinkDB
All DBs
Position
19:complement(6114434..6116990)
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AA seq
273 aa
AA seq
DB search
MAPSPTKRKDEDKGKQRGKEKSGATKEGADKDRGREKNRTRRSASSGSSRSSSSSSSSSS
SGSSSGSSSSGSSHSGSSSSRSSSSSSSSSSPSPSRQRHNNRRRSRSKSETGKKDERDRR
RRSPTPKPTKVYLGRLTRNVIKEHIQEIFSTYGKIKMIDMPINRVPPHLSKGYAYIEYET
PEEAEKALKHMDGGQIDGQEITVTAVLAPIVRPPPRRLSPPRRMPPPPPMWRRTPPRMRR
RSRSPRRRSPVRRRSRSPGRRRHRSRSSSNSSR
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggcaccttccccaacaaagaggaaagatgaagacaagggtaaacagcgaggaaaggag
aaatcaggagccacgaaagaaggagctgacaaagatcgaggtcgagagaagaatcgcaca
cgccgcagtgcttctagtgggagtagcaggtccagctccagctccagcagcagctccagc
tccggctcctccagcggctccagctcctctggctctagccactcaggttcctccagctcc
cgctcttcgtcctcttcctcctcctcctcctcaccaagccccagtcggcagcgccacaac
aacagacgacgctcacgttccaaatcagaaacaggaaaaaaggatgagagggacaggcga
cgcagaagccccacgcccaaacccacaaaggtctacctgggccggctgaccagaaatgtt
atcaaggaacacatccaggagatcttctccacttatggcaagatcaaaatgattgacatg
ccaataaaccgcgtcccgcctcacctgtccaagggctatgcctacattgagtatgagaca
cctgaagaggctgagaaagctctgaaacacatggacggaggtcagattgatggtcaggaa
atcactgtaacagctgtgctggctcccattgtgcgtcctccacctcgcaggctgtcccct
ccacgaaggatgccccccccaccaccaatgtggcgacgcactccaccgcgaatgaggaga
agatctcggtctccacgacgacgctcaccagtacgccgcaggtctcgttcccctgggcgt
cgtcgccatcgttctcgctccagttccaactcctcccgctaa
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