Betta splendens (Siamese fighting fish): 114846834
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Entry
114846834 CDS
T08231
Symbol
cnot9
Name
(RefSeq) CCR4-NOT transcription complex subunit 9 isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114846834 (cnot9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114846834 (cnot9)
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114846834 (cnot9)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
114846834
NCBI-ProteinID:
XP_028991802
UniProt:
A0A6P7LBD9
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Position
21:complement(16410937..16414571)
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AA seq
299 aa
AA seq
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MLATGAAVTNVTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSC
GTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLY
PFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKT
VATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLS
DNLRAREALRQCLPDQLKDSTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDARGIPLAPQ
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgacgggagcagctgtgactaatgtcacagctctggcccaggtggaccgagag
aagatctaccagtggatcaatgagttatccagcccggagaccagagaaaacgccttgctt
gagctaagcaaaaaacgagagtctgtaccggatctggcccccatgctttggcactcctgt
ggcaccattgctgctttgttacaggagattgtgaatatttatccatctataaatccacca
acacttacagctcatcagtctaacagagtttgcaatgccttggcactactgcagtgtgtt
gcctcacatccagagacacgatcagcttttcttgctgctcacattcctcttttcctttac
ccttttctgcacactgtgagcaaaactcgaccttttgagtacctcaggctcaccagcctc
ggagtcataggtgctttggtcaaaaccgatgaacaggaagtaattaatttcctcctcacc
actgaaatcatcccactttgtcttcgaatcatggaatcaggcagcgaactttccaagacc
gttgctactttcatattgcagaagattctgctggatgacacagggctggcctacatatgt
cagacgtatgaacgtttctcccacgtggccatgatccttggtaaaatggtgctgcagctc
tcaaaagaaccttcagcacgtctgctgaagcatgtggttcgctgctacctccgcctctcg
gacaatctcagggctagagaagcactgcgtcagtgtctaccagaccagttgaaagacagc
acctttgcccaggtgctgaaggatgacaccactacaaagcgctggctggcacagttggtg
aagaatctacaagaaggccaagtcacagatgctagaggcatccccctggctccacagtaa
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