| Entry |
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| Symbol |
bard1
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| Name |
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
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| KO |
| K10683 | BRCA1-associated RING domain protein 1 |
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| Organism |
bspl Betta splendens (Siamese fighting fish)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:bspl00001]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114846871 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:bspl03019]
114846871 (bard1)
04121 Ubiquitin system [BR:bspl04121]
114846871 (bard1)
03036 Chromosome and associated proteins [BR:bspl03036]
114846871 (bard1)
03400 DNA repair and recombination proteins [BR:bspl03400]
114846871 (bard1)
Messenger RNA biogenesis [BR:bspl03019]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
114846871 (bard1)
Ubiquitin system [BR:bspl04121]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
114846871 (bard1)
Chromosome and associated proteins [BR:bspl03036]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
114846871 (bard1)
DNA repair and recombination proteins [BR:bspl03400]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
114846871 (bard1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
21:10527544..10543844
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| AA seq |
783 aa
MMDHEDWKNTKEAVANFRRLLLCSKCSNLMKDPVCLGTCEHMLCRSCAGPCAGDGCMVCH
SPAWVKDIQINRQLSSIVQLFSDLESILNPPEPDSIADFQTEPKSPVFRQKKTFKIWFSP
RSRKVRCAVEKPSDITVSESRSPGKTDAAQQDAGTAQPKDLSVFNFSSSSQDSGSSSPQR
RNPENKNRKNRAAKRNAASKVQGAAAITRKRIKQDMKKRRLAAINQQWGVTEEIMQKEQT
CVQETKKPSKRVSFVSPAVTPDKPQPDVPKGNEISTGESLPGVSTTQMNHQDLASQSMSV
SVTQKNTPAASDLNPADEPEIQPHVCSPKPLKRSRVEEKVGTLETTPKRPRTSPGRRRRS
LGRMSPGALRPPSVSSPTTPRTEREDSPSPTAGRGRKSPSARAASVGHPSPGSPAVMKRN
HKGETLLHVAAIKGDVAAARELLEQGADPNLKDNAGWTPLHEACNLGHLEVVELLLSRGA
LLNTPGYKNDSPLHDAARNGHAAIVELLLRHGASPSVLNLYGKQPADYAASVEMLEIFQK
ASEGNQYANAPPSPSVSLSVVNDCARMEEMPVFLATKLSGPEQRNLAKLGRLLGGRVVDT
FSSSVSHVVVPEGHLPTTYSALLGLLAGCWIVRYSWVAACLQEGRRMPETEHEAGDGPPR
SRINRCSLLPPLFDGCFFFLLGSFKAPTKDELARLLRGGGGQLLSRQPKPDSDVTQTLSA
AAYHALPGSDQALCTQYVVFDPQGPHRPAVLRRGKVWSAPSTWIVDCIAAFQLLPVPEPQ
ISV |
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| NT seq |
2352 nt +upstreamnt +downstreamnt
atgatggatcatgaagattggaaaaacactaaggaggccgtcgcgaactttcgacgtctg
ctgctttgctccaaatgctcaaacctaatgaaggaccctgtgtgtcttggaacgtgcgag
catatgctgtgcaggtcctgtgctggtccctgtgcgggcgatggctgcatggtgtgtcac
agtcctgcgtgggtgaaggacattcagatcaaccggcagctcagcagcatcgtacagctc
ttttctgacttggagtccatcctgaatcccccagaacctgactctatcgctgattttcaa
acagaacctaagagccctgtttttagacaaaagaagacctttaagatctggttcagcccc
cgcagccgcaaggttcgctgcgcggtggagaagccttcagacatcacagtgtctgagagt
aggtctcctggtaagaccgacgcagcacagcaggatgctggtactgctcagcccaaggac
ctgtcagtttttaatttctcctcatcctcccaagactctggctcctcttctcctcaaaga
cgcaaccctgaaaacaaaaacaggaagaaccgcgcagctaaaagaaatgctgctagcaag
gttcaaggtgcagctgcaatcacacggaagcggatcaagcaggatatgaagaagaggagg
cttgcggctataaatcagcagtggggagtgactgaggagattatgcaaaaggagcagacc
tgtgttcaagagacaaagaagcccagtaaaagggtttcctttgtgagccctgcagtcacc
cctgacaaacctcagcctgatgtgccgaaggggaatgaaatcagcaccggtgagagcctc
ccaggagtcagcaccactcaaatgaaccaccaggacttagccagtcagagcatgtctgta
agtgtcacccaaaaaaacacaccagctgccagtgacctcaaccctgcggacgagcctgag
atccagccccatgtttgttccccaaagccattaaaaagatccagggtagaggagaaggtc
ggaaccttggagaccacaccgaaacggccgaggacctctccaggccggagacgaagatcg
ctgggtcggatgtctccgggtgccctcaggcctccatctgtgagtagccccacaaccccc
aggacagagcgagaagacagtccctcacccacagccggtcgtggtagaaagtcccccagt
gctcgggctgcatcggtcggccatcccagcccaggaagccctgcagttatgaagaggaac
cacaagggagagaccctgctacatgtagctgctataaagggagatgtagcggctgccagg
gaactgctggagcagggggccgaccccaacctcaaggataatgctgggtggacacctctg
catgaagcatgtaacctgggtcacctggaggtcgtggagctgctgctctccagaggagct
ctactcaacacacctggctataaaaacgactccccgctccacgatgccgcgaggaacgga
cacgcagccatagtggagctgctgctgcggcacggagcctcgcccagcgtcctcaatctg
tatggaaagcagcctgcagactacgcggcgagtgtggagatgctggagattttccagaaa
gcctcagaaggaaaccaatatgctaatgcgcctcccagcccgtcagtgagcctgtctgtg
gtgaacgactgtgcgaggatggaagagatgccggtgttcctggcgaccaagttgtctgga
cccgagcaacgcaacctggccaaactgggacggctactgggagggagggtggtggacacc
ttttctagctcagtcagccatgtcgtggtgccagaaggacacctgcccaccacctactcc
gccctcctgggactcctcgccggctgctggatcgtcagatacagctgggtggcggcgtgt
ctgcaggaaggcaggcggatgcctgaaacggagcacgaagcaggggacgggcctccacgc
agccgcatcaacagatgcagcctgctcccgcccctcttcgacggatgcttcttcttcctg
ctgggctccttcaaggcgcccaccaaagacgagctggccaggctgctccgggggggagga
gggcagctcctgagccgccagcccaagccggacagcgacgtgacccaaaccctgagcgcg
gccgcctaccacgcgctgcccggctccgatcaggcgctgtgcacccagtacgtcgtcttc
gaccctcagggcccccacaggcccgcggtgctcaggcggggcaaggtgtggtcggcgccc
tccacctggatcgtcgattgcatcgcggcgttccagcttcttcctgtgcctgagccgcag
atatcggtctga |
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