Betta splendens (Siamese fighting fish): 114846915
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Entry
114846915 CDS
T08231
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bspl03037
]
114846915 (ift88)
Cilium and associated proteins [BR:
bspl03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
114846915 (ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_19
TPR_7
TPR_6
TPR_16
TPR_14
TPR_11
ANAPC3
TPR_9
TPR_17
ARM_TT21_5th
TPR_CcmH_CycH
SNAP
TPR_10
ARM_TT21_4th
TPR-S
ARM_TT21_C
ARM_TT21_N
DUF2225
MIT
RPN7
ARM_TT21
ARM_TT21_2nd
HAT_PRP39_C
TPR_15
SHPRH_helical-1st
HEAT_Nup120
Consortin_N
NatA_aux_su
RNPP_C
Coatomer_E
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
114846915
NCBI-ProteinID:
XP_028991987
UniProt:
A0A6P7LC31
LinkDB
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Position
21:complement(3574788..3585524)
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AA seq
846 aa
AA seq
DB search
MEHVHLAVEEEDLYSGYNDYNPTFDSEELENDVGFLQAVRTSHGRRPPMTAKFPGTAIGA
RPLASSFGSRIPMVSSMGRPMTGAVQDGAARPMTAVRAAGYTSTLTRGTNFDPLGQSRGP
APPLETRSEDTPEEKIKILEKKVNDLLEESCMAQSMGAIQLALEKAKEAGRKERILVRQR
EHNGNADINVDLTYSVLLNLANQYANNEMYPDALRSYQVIVKNKMFSNAGRLKVNMANIY
FKQKNYPKAIKFYRMALDQISNAHKEMRIKIMQNIGVVFVRIGQYSDAITSFEHIMSESP
NIKTGFNLILCYYAIGDKERMKKAFQKLISVPLGIDDEDKYIPSNDDTESNMVIEAIKND
KLHQMERNLKVLAEKYIMTSAKLIAPAIETSFATGFDWCVDMVKSSQYVELANDLEINKA
ITYLRQKDFNQAVETLKTFEKKDSRVKSAAATNLSFLCFLEKDYDQADRYSDLAMNADRY
NPAALINKGNTVFVKQDYEKAAEFYKEALRNDSSCTEALYNLGLTYKKLSRLEDALDCFL
KLHAILRNSSQVMYQLAHLYELLEDPQQAIEWLIQVISVTPTDPHALAKLGELHDSEGDK
SQAFQYYYESFRYFPSNIDVIEWLGAYYIETQFCEKAIQYFERATLIQPTQVKWQLMVAS
CYRRSGNYQKALDTYKDIHSKFPENVECLRFLVRLCTDMGLKEVQEYATKLKKVEKMKEL
REQRVKSGREGSGRGRREGSAGSAGKGVLTPVVTPPKASSVMGSSETAKADSSHSSSSTK
GERLSAKMRSLPSSAEPYEASSPKEIDASYVDPLGPQMERPKTGARRRVDDDDFADEELG
DDLLPE
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggagcatgttcatctcgctgtagaggaggaggatctttattcgggttacaacgactat
aacccaacatttgattccgaggagttggagaatgacgtaggcttcctgcaagctgtgagg
acaagtcatgggagaagacccccgatgactgctaaatttcctggcactgccattggagcc
aggccattagcatcttcctttggaagtcggatccccatggtgtcctcaatgggcagacct
atgaccggggctgtgcaggatggagcagcccgaccaatgactgctgtcagagcagcaggt
tacacctccactctgactcgaggcacaaactttgatcctctgggccagtctagaggccct
gctcctccacttgaaacaaggagtgaggacacacctgaggagaagattaagatcctggag
aagaaagtgaatgacttgctggaagaaagttgcatggcacagagcatgggagctatacag
ctggctcttgaaaaagctaaagaggctgggaggaaggagagaatattggtgagacagaga
gaacataatggaaatgctgacatcaacgtggatctcacctactctgttttgctcaacctt
gccaaccagtatgccaacaatgaaatgtacccagacgccctgaggagctaccaggttatt
gtaaagaacaagatgttcagtaatgcaggccgtctgaaagtcaacatggccaacatatac
ttcaaacaaaaaaactacccaaaagccatcaagttctatcgaatggctctggatcagatc
tcaaacgctcacaaggaaatgaggatcaagatcatgcaaaatattggcgtggtctttgtt
cgcatcggccagtactcagatgccattacgtcttttgaacacatcatgagtgagagcccc
aacatcaagacaggattcaacctcatcttgtgctactatgccattggtgataaagagagg
atgaagaaggcctttcagaagctcatttcagtcccgttgggcattgatgatgaagacaag
tacatcccatcaaatgatgatacagaatcaaatatggttatcgaggctattaagaatgac
aaacttcaccagatggaaagaaatctaaaagtcctggcagagaagtacatcatgacttct
gccaaactcatcgctccagctattgagacttcttttgctactggatttgactggtgtgtg
gacatggtaaagagctctcagtatgttgaacttgccaatgatctagagataaacaaagcc
atcacctacctccggcagaaagacttcaaccaggcagtggagactttgaaaacatttgag
aagaaagacagcagagtgaagagcgctgcagccaccaacctctccttcctctgcttcctg
gagaaggactatgaccaggctgaccgatattctgacctcgccatgaacgccgatcgctac
aacccagcagctctcatcaacaagggcaacacggtgttcgttaagcaggactatgaaaag
gctgcagagttctacaaagaggcactgaggaacgattcctcctgcaccgaggccctctac
aacctgggactaacctataagaagctcagccgcctggaggacgccctggactgcttcctg
aagctccatgccattctgaggaacagttcccaagtcatgtaccagctggcccacctttat
gagcttctggaggatccacagcaagcaatcgagtggctgatccaggtgatcagtgtaact
cccactgatccacacgcactggccaaactgggagaactccatgatagcgagggggacaag
tctcaggctttccagtactactatgagtcatttaggtacttcccttcaaacatcgatgtt
attgaatggctcggcgcttattacattgagacacagttctgtgagaaagccattcagtac
tttgaaagagccacactcatacaaccaactcaggtgaagtggcagctgatggtggcgagc
tgttacagaaggagtggaaactaccagaaggctctggacacctataaagacatccacagc
aagtttccagaaaacgtggaatgcctgcggttcctggtgaggctgtgcacagacatggga
ctgaaggaagtccaggaatatgccaccaaactaaagaaggtggagaagatgaaggaactc
agagaacagagggtgaagtcgggccgggaaggcagcggccgcggtcggagggagggcagc
gcagggagcgcaggtaaaggggtcctcacacctgttgtcactcctcctaaggcttccagc
gtcatgggctcatcagagaccgccaaagcagatagcagccacagcagcagcagcaccaaa
ggagagcgactgagcgccaagatgaggtcacttccctcctccgctgagccctatgaggcc
agcagcccaaaagaaatagatgcgtcttacgtggacccgctggggcctcagatggagaga
ccgaagacgggggccaggaggcgcgtggacgacgacgacttcgcagatgaggagctcgga
gacgacctgctgccggagtag
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