Betta splendens (Siamese fighting fish): 114847143
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Entry
114847143 CDS
T08231
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04145
Phagosome
bspl04814
Motor proteins
bspl05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
114847143
09142 Cell motility
04814 Motor proteins
114847143
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
114847143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bspl03036
]
114847143
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bspl04812
]
114847143
Chromosome and associated proteins [BR:
bspl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
114847143
Cytoskeleton proteins [BR:
bspl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
114847143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML
WDR55
Dynein_IC2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_IP5PC_F
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
114847143
NCBI-ProteinID:
XP_028992409
UniProt:
A0A6P7LFM3
LinkDB
All DBs
Position
21:complement(8851995..8866151)
Genome browser
AA seq
637 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKEADQLKDTTFHQDDSDLDKKRREAD
ALLQSMGITPDVPVVPPPTSPTNKLADTPSDAGSQDSDGAVGPRNLHWDSDPSTLQLHSD
SELGYWTLSSLLSWRGTQKLGMAKVTQVDFPPREVVSYTKETQTPVITQQKEEEEEEEEI
PQPQPVVETPTEKPDQKEEEEAPPHELTEEEKLQILHSEEFVNFFEHSTRIIERALSEHV
DVFFDYSGRDLEEKEGEIQAGAKLFLNRQFVDERWSKHRVVTCLDWSPQYPELLVASYNN
NEEAPHEPDGVALVWNMKYKKSTPEYVFHCQSAVMSAAFAKFHPNVVVGGTYSGQIVLWD
NRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSQPQDS
MELVFKQSKAVAVTSMSFPLGDVNNFVVGSEDGSVYMSCRHGSKAGISEMFEGHHGPITG
IHCHTAAGPLDFSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNSDYVYDVMWSPTHPALFA
CVDGVGHLDLWNLNNDTEVPTASVTVEGNTALNRVRWAHSGREIAVGDSDGQVLVYDIGE
QIAVPRNDEWTRFVRTLAEINENRDETEELAAQRLAA
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaaagtgagctgaaggcagagcttgaaaggaagaagcaacgtttggcacaa
atcagagaagagaagaaaagaaaggaggaggagcgcaagaaaaaagaggcagatcagttg
aaagatactacattccatcaggatgattctgacctggataaaaaaaggcgtgaggctgat
gcgctgctgcagagtatgggcataaccccagatgttcctgttgtccctcctccaacgtct
ccaacgaacaaattggcggacacgccaagtgatgcagggagccaggactctgatggagcc
gtgggacccaggaatctgcactgggactctgacccgtccacccttcaacttcactctgat
tctgagctggggtactggacactctcttctctcctttcctggcgaggaactcaaaaactg
ggaatggccaaagtcacacaagtggacttccctccgcgtgaagttgtgtcctacacaaaa
gagacccaaacacctgtcattacccagcaaaaagaagaggaagaagaggaggaagagatt
ccacagcctcaaccagtagttgagacgccgactgagaaaccagatcagaaagaggaggag
gaagctccccctcacgagctcacagaggaggaaaaactccagatcctgcactcggaggaa
tttgtgaatttcttcgagcacagcactcggattattgagcgggctctgtcagagcatgtg
gacgtcttctttgactacagtggtcgtgacctggaggagaaggagggtgagattcaggcg
ggagcaaagctctttctcaacagacagttcgtggacgagcgctggtccaaacatcgtgtt
gtcacctgcctcgactggtctccacagtatcctgaactcctggttgcctcatacaacaac
aacgaggaagctccccacgagccggacggtgtggcattggtgtggaacatgaagtacaag
aagtccacgccggagtatgtcttccactgtcagtctgctgttatgtcggcagccttcgcc
aagttccaccctaatgtggtggtggggggaacatattcagggcagattgtcctgtgggac
aacaggagcaacaagaggacccccgtgcagagaacccccctgtcggcagcagctcatacg
catccggtttactgcgtgaacgtggtcggcacccagaacgcccacaacttaatcagcatc
tccactgatggcaagatatgctcctggagtctggacatgctttcacagcctcaggacagc
atggagctggtgttcaagcagtccaaagctgtagctgtcacctccatgtctttccctctc
ggagacgtcaacaatttcgtggtgggcagcgaggacggctccgtctacatgtcgtgtcgt
catggaagcaaagcgggcatcagtgagatgtttgagggccaccacggccccatcacgggg
atccattgccacacggctgccgggcccttggacttctctcacttgtttgttacctcctct
tttgactggactgtcaagctgtggagcaccaagaacaacaaacctctgtactcatttgaa
gacaactcagattatgtttatgatgtcatgtggtccccaactcaccccgcgctgtttgcc
tgtgtggacggagtcggacacctcgacctgtggaacctcaacaatgacacagaggtgcct
actgccagcgtcacagtagagggtaacacagccctcaacagggtcagatgggctcattct
ggcagagaaatcgctgtgggagattctgatgggcaagtgcttgtgtatgatattggcgag
caaattgcggtcccacggaacgacgagtggacccgttttgtgcgtacgctggcggagatc
aacgagaacagggatgagacggaggagctggctgcccagcgcttggctgcatga
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integrated database retrieval system
