Betta splendens (Siamese fighting fish): 114847203
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Entry
114847203 CDS
T08231
Symbol
lmo7a
Name
(RefSeq) LIM domain only protein 7 isoform X9
KO
K06084
F-box protein 20
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
114847203 (lmo7a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bspl04121
]
114847203 (lmo7a)
Ubiquitin system [BR:
bspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
114847203 (lmo7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ_6
PDZ
PDZ_2
Motif
Other DBs
NCBI-GeneID:
114847203
NCBI-ProteinID:
XP_028992520
UniProt:
A0A6P7LEA3
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All DBs
Position
21:5573656..5605550
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AA seq
1466 aa
AA seq
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MEWREQSAVSCDDAYAEAQRWIEAVTKQKFGSNDFRSELENGVLLCDLINRIKPGIIKRI
NRLPTPIAGLDNLNVFLKACGKLGLREAQLFHPGDLQDLSTRVTVKHQETNRRLKNVLIT
IFWLGRRAYSDPLYHGAYLNFKAFEGLLGTALYKALQETAGQKGSSIRDSGFGDSWCEER
EELYPLRGRRGGGGGGGEGGGGHRRDDSLDSLDSLGSRPHSVSSDATLKGSSEGCCSDAE
TDSDFRMAENKDQISYRRSVVITPKTTTQFNQFLPTKDKSSGYVPAPLRKKRAERSEDSV
AARRSWANPSYSEEESPLTRQQQEPEALDGSKSTSDILAEPAVARQVRYEELQKFREHVK
QSEDKWQDDLSKWKSRRRSVNSDIVKKKEERETIEQITYGSRRRSKTFKEMQEERENKGV
SHRLGSLSYLDDEDVFAGPVVSPRSRTLPPRSHTIDTSYFSPDSTVSSEPPSRQPEPRAA
SSPPTSRAPNAAADPTPAIAPRSHAPLRSAASPAAPPSQQGPVPARSTNKTTETPSPVSP
VSPSSSLQQVPEPKQPLVTPPSSSLNKQRPQLNSVEPESAAAPLQKTPVPEPSGAAKKEE
AAPAVSSSSPPQKVPALRRPLLVPQANVDAPSSGALYKQQPQPSSMEPKPPGVSRVSASL
PRSYQRSDSARLTSVVAPRPFGSQASRISSLPRASTMDTSNKRVNGDVSKKSTVPSRYHQ
FMTSEDEAQSSSAQSSEEEEEEEEKAAKSVAPTQSVAPAPAPTKSEAPPTSSPAKEAAKE
SFCDMRINLNQKPNSSRDFGFQANWDSTGARVTSIQTGSPAEMCQLQAGDEVLTVNGHQV
AGMSYTDWKACMGEALQEGSLVMDVRRHGQNTWDRDPPSLPFKRHKTINLTSTDHPVLLG
PDSNPPTKTSLDFTSRIPPEPKEPAAADDASSRVNGSVAEEPVTMRNKESEPISLKNLKR
RSEFFEQGGSEAALPDIPVPPITPSSSRWSWDPEEERRRQEKWQKEQERLLQEKYKRDQE
KLQEEWLKAQQEVAKSQPGSLEVNSHSVGPRSPLSPTSEPASRPWEEEERKRREELERQR
QAEERRKREEEERQLRLLQEERKRKEKQEEEERRRREEEELRWQRKKEEEREEERRRQRA
LEQQWAAGSSGFDSVQPPLSSTDRAKSKSSPQLDEEDKPQRKGAHVQPRGMAQWLLEEQL
RSARDKQARGQRATSELEMERRNILNAMRYRDPERATGNQPLSQVELERQQILNEMKKKT
PLLTDASWIRQRSPDAGGSREGDAPPMRRGESLDNLDTSYSSWRSSWTPKGNAYVQSSSR
PHSALSGARRPASSALPSSYSMGSLRGGAGSPSGPSAPWSRQTPSPSLSSPSPVASPEPT
SEASQQRSRSVSGKKICTFCDAPLGKGAAMIIESLGLCYHLTCFKCIDCKSDLGGSEAGA
EVRIRNKQLYCNTCYVRFKSGQPTVM
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgcgagcagtccgctgtcagctgcgacgacgcctacgcggaggcgcagaga
tggattgaggctgtaaccaagcaaaaatttgggagcaacgacttccgatcggagctggag
aatggcgtgctgttgtgcgatctgatcaacagaatcaagcctggaattatcaagaggatt
aacaggctgcccacacccattgctggactggacaacctcaacgtctttctcaaggcctgc
gggaagctgggactgagggaggcgcagctctttcacccgggagatctccaggacttatcc
acacgagtcacagtcaagcaccaagagaccaacaggaggctgaaaaatgtgttgatcacc
attttctggctgggaaggagagcttactctgatcctctttatcatggagcttacctgaat
ttcaaggcatttgagggattactgggcacagcactatacaaggctctgcaggaaacggcc
ggtcagaaaggcagcagcatccgagacagcggcttcggcgatagctggtgcgaggagcgc
gaggagctctatccgctgagaggacgcagaggaggaggaggaggaggaggagaaggagga
ggcggacacaggagagacgactccctggacagtttggactcgctgggctcccgaccacac
agcgtttcatctgacgccacccttaaaggcagcagcgagggttgctgcagtgacgccgag
acagactccgacttcaggatggctgagaacaaggaccaaatcagctaccgccgctcggtg
gtcatcacgcccaagaccaccacccagttcaaccagtttctgcccactaaagacaaatcc
tcgggctacgtgccggcgccgctgaggaagaagcgggcggagcgcagcgaggacagcgtg
gctgcccggcggagctgggccaacccttcgtactcggaggaggagagccccctgaccaga
cagcaacaagagccggaggctttggacgggagtaaatccaccagcgacatcctggcggaa
cccgccgtcgcgcgccaggttcgctacgaggagctgcagaagtttcgtgaacatgtaaag
cagagtgaggacaagtggcaggatgacctgagcaagtggaagagccgccgccgaagcgtc
aactctgacatagtgaaaaagaaggaggagcgcgagaccatcgagcagatcacgtacggc
agcaggcgaaggtccaagaccttcaaggagatgcaggaggaaagggaaaacaaaggcgtc
agccatcgcctcgggtccctctcttacctggacgacgaagacgtattcgccggacctgtc
gtctcccctcggagtcgaaccctccccccgaggagccacacgattgacacttcctacttc
tcccctgattcaacggtctcctccgagcctccgtcgcggcagcctgaaccccgcgctgcc
tcgtctcctcccacttcacgggcgccaaacgccgcggccgaccccactcccgccatcgcc
cccagaagccacgcccccctccgcagcgccgcgtccccggcagcaccgccttcccagcaa
ggtccggtcccagcacgcagcacgaacaagacgaccgagaccccatcccccgtctccccc
gtctccccctccagctccctccaacaggtgccagagcccaagcagccgcttgtgaccccg
ccctcgagttctctgaacaaacagcggccgcagctcaactcggtggagccagagtccgcc
gctgcacctttacagaagaccccggtcccagaacccagcggcgccgccaagaaggaggag
gccgcccccgccgtgtcctcctccagccccccacagaaggtgcccgctctgaggcgcccc
ctgttggtcccacaggccaacgtggacgccccctcctccggagcgctgtacaaacaacag
ccacaacccagctccatggaacccaagcctcccggggtgtctcgggtttccgcctccctc
cccaggagttaccagagatcggatagtgctcgtctaacttcagttgtggctccgaggccc
ttcgggtcccaggcctcacgtatcagctcacttcccagagcctccacaatggacacctcc
aacaagcgggtcaacggcgacgtgtccaaaaagtcaactgtgccgagtcgctatcaccag
ttcatgacctccgaggacgaggcccagtccagttcggcccagagcagcgaagaggaagag
gaggaggaggagaaggcggcgaagagcgtcgcgcccacgcagagcgtcgcgcccgccccc
gcgcccaccaagagcgaggctccacccacttccagtccagccaaagaagccgcgaaggag
agcttctgtgacatgcgcatcaacctgaaccagaaacccaacagcagcagagacttcggc
ttccaggcgaactgggactcaacgggcgctcgcgtcacctccatccagacaggcagcccg
gccgagatgtgtcagctgcaggccggagacgaggtgctgacggtgaacgggcaccaggtg
gcaggaatgagctacacagactggaaggcctgcatgggggaggctctgcaggagggcagc
ctggtcatggatgtgcggcgtcacggccagaacacctgggacagagatccaccttcccta
ccctttaaaagacataagaccatcaatctgaccagtacggatcacccggtgcttctaggt
ccagactccaaccctccgaccaaaaccagcttggatttcacctcgcggatccccccggag
ccgaaagagcccgccgccgcggatgacgcttcaagcagagttaatggaagcgtcgccgag
gagcctgtgaccatgaggaacaaagagtcagaacccatatctttgaaaaacttaaaacgg
aggtcagaattttttgaacaaggaggatcagaggcggcgctgccagacatccccgttcct
cccatcacaccctcctccagtcgctggtcctgggacccagaagaggagcgcaggcgtcag
gaaaaatggcaaaaagaacaagagcgcctcctacaggagaaatacaagcgcgaccaggag
aagctgcaggaggagtggctcaaggctcaacaggaggttgcaaagagccagcccgggagc
ctggaggtgaacagccacagcgtcggcccacgctcgcccctctctcccaccagcgagccc
gcttcccggccgtgggaggaggaggagaggaagaggagggaggagctggagcgccagcgg
caggcggaggagaggaggaagcgggaggaggaggagcggcagctgcggcttctgcaggag
gagaggaagaggaaggagaagcaggaggaggaggagcggaggaggagggaggaggaggag
ctgaggtggcagaggaagaaggaggaggagagggaggaggagaggaggcgccagcgagcc
ttggagcagcagtgggctgccggctcctctggctttgacagcgtccagcctccactgtcc
tccacagacagggctaaatccaagtcctcccctcagctcgatgaagaggacaagcctcaa
aggaaaggcgcgcacgtgcagccgaggggcatggcccagtggctgctggaggagcagctg
aggagcgcgcgcgacaaacaggcccggggtcagagggccacgtccgagctggagatggag
aggaggaacatcctcaacgccatgagataccgagacccggagagagcgacgggaaaccag
cctctgtcgcaggtggagctggagcggcagcagatcctgaacgagatgaagaagaagacg
ccgctgctgacggacgccagctggatccgccagcgctcgcccgacgcgggcgggtcccgg
gagggcgacgccccgcccatgcgcaggggggagtcgctcgacaacctggacacctcctac
agctcctggcgctcgtcgtggacgcccaaaggcaacgcctacgtccagagctccagccgg
ccccactccgccctctcgggggcccggcggcccgcctcctccgccctgccctcctcctac
tccatgggctccctccgggggggggcggggagcccctcgggcccctcggcgccctggtcc
cggcagacgccgtccccgtcgctgtcgtccccgtcacccgtggcttctccggagcccacg
tctgaggcctcccagcagcggagcaggtcagtgagtggcaagaaaatctgtacgttctgc
gacgccccgctgggaaaaggagccgccatgatcatcgagtccctcgggctctgttatcat
ttgacctgttttaagtgcatcgactgcaagtccgacctgggaggctcggaagccggcgcc
gaagtccgaatacggaacaagcagctttactgcaacacctgctacgtgcgattcaaaagt
ggccagccaacagtcatgtga
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