Betta splendens (Siamese fighting fish): 114847454
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Entry
114847454 CDS
T08231
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
114847454 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bspl03400
]
114847454 (xrcc5)
DNA repair and recombination proteins [BR:
bspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
114847454 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
114847454
NCBI-ProteinID:
XP_028993054
UniProt:
A0A6P7LHA8
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Position
21:complement(10077773..10083899)
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AA seq
724 aa
AA seq
DB search
MAWAKSASVLCMDVGFSMSNNAPGEEPPFELAKKVIQKFVQRQVFAETKDELALVLFGTD
ATKNPLDRDGQYQNITVHRHLTVPDFELLEEIEHQVQPENQQADWLDALVVCMDILKTET
KGKKYDRLNIAMLTDLNTQASADDLDVIIENLKQAGITLQFFLPFNTEDGVVSGGDVDRR
GPAHPSTGKGLSSEQQSGLDIVKHIMLSLDEEDGLDQVYSFMCALEQLHMFKRIERRPMA
WPCQLTIGSSLPIRIVGFKAVTEEKLKKTWISVDAQTNEKEDIKRETVYCLDDDNETEVP
KDDTIQGFRYGSDIVPFSKVDQDQMKYKHDGKCFAVLGFTKQHMIQRHLFMGNQVIKMFA
PSGDEHAGVALSALIRALDELQMVAIVRYAYDRRSNPQVGAAFPCIKQHYECLMYVQLPF
TEDLRHFTFPSLDNKKFTSSDAQLSAVDSLIDSMMLVEKDENGEQKDMLKVHHIPNPAFQ
RHFQCLHHRALNPDMPLPPMEPWLKAALERPEVINERCKVPLAEIKRKFPLTEVEKKKKL
KTSAQIFGKDSEAADAQKAKRDEEEEDYNLADIAEGTVTSVGSVDPARDFHALIKQKNLS
FGEVCQQLTHRIEQLLSNKNTHYYMKSITCIQAFREQSVKLGNAELFNSYLQSLKRSIPN
RGLEVFWDLLVQDAVTLISKDEVEGSTVSKSEANEFLVGEEKKEEEAAPPAEDTGDVDDL
LDMM
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcttgggctaaatcagcgtcggtgctgtgcatggacgtggggttctccatgtccaac
aatgctccgggtgaagaacctccgtttgaactagccaaaaaggtcattcagaagtttgtc
cagcgccaggtttttgctgagacaaaggatgaactggctttagttctgttcggaacagat
gccaccaaaaaccccctggaccgagacggccagtaccagaacatcactgtccatcgtcac
cttacagtacccgattttgagcttctagaggagattgagcaccaggttcagccagagaac
caacaagctgattggctggatgctcttgttgtctgcatggacatccttaaaacagaaacc
aaagggaaaaagtatgatcgcctcaacattgccatgttgactgatctcaacacccaggcc
agtgcagatgacctggatgttattattgaaaatctgaaacaagctggcatcacactgcag
ttttttttaccttttaacactgaagatggtgtggtgagtggaggagatgtagacagaaga
ggccctgctcacccctccacaggcaaaggtctgtccagtgaacagcagagtggtctggac
atcgtcaaacacatcatgctaagtctggacgaggaggacggccttgaccaggtttattcc
ttcatgtgtgcacttgaacagctgcatatgttcaagcgtattgaaaggagacccatggca
tggccctgtcagctgaccattggcagctcactgcctattcgtattgttgggtttaaagca
gtgacagaagagaagcttaaaaaaacatggatttcagtcgatgctcaaacaaatgagaaa
gaagacattaagagagagactgtctactgtctggatgatgacaatgagacagaagtgccg
aaagatgacacgattcaaggttttcggtatggaagtgacattgttcctttctcaaaagtt
gatcaagatcagatgaaatacaagcatgatgggaagtgctttgctgtactaggctttact
aagcaacacatgatacagcgtcatctgttcatgggaaatcaggttatcaagatgtttgct
cccagtggtgatgagcatgcaggagtagcactgtcagcccttatccgggcactagatgaa
ctccaaatggttgccattgtacggtatgcctatgatcggcgcagcaaccctcaagtagga
gcagcgttcccttgcatcaaacagcactatgagtgtttgatgtacgtccaactgcccttc
acagaagacctcagacattttacgtttccttctctcgacaacaaaaaattcacttcgtca
gatgcacagctgtcggctgtagactctctcattgactctatgatgttggtagagaaagat
gagaatggagaacaaaaggacatgttgaaggtccaccacattccaaaccctgccttccaa
aggcacttccagtgcctgcatcatcgggctttaaaccctgacatgccacttcctcctatg
gagccatggctcaaggctgctcttgagcgtcctgaggtcatcaatgagagatgcaaagtc
ccacttgcagagataaaaaggaagtttcctctcacagaagtggagaagaagaagaaactc
aagaccagcgctcagatttttggcaaagactctgaggcagcagatgcccagaaggcaaaa
agagacgaagaggaggaggactataacctggctgacattgctgaaggcactgttacttcg
gtgggaagcgtggatccagcccgagacttccatgctctgatcaagcagaagaatctttca
tttggagaggtctgccagcaactgactcacaggatagagcagttgcttagcaacaagaac
acacactactacatgaaaagcatcacctgtatccaggcatttagagagcagtccgttaag
ctggggaacgctgaactcttcaatagctacctccaatccctgaaaaggagcatcccaaac
agaggcctagaggtcttctgggacctgcttgttcaagatgctgttactttgatcagcaag
gatgaggttgaaggaagtaccgtatccaaaagtgaagccaatgagtttctggttggcgag
gagaagaaagaagaggaggccgcaccaccagctgaagacacaggagatgttgacgacttg
ctggacatgatgtga
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