Betta splendens (Siamese fighting fish): 114847523
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Entry
114847523 CDS
T08231
Symbol
rpgra
Name
(RefSeq) X-linked retinitis pigmentosa GTPase regulator isoform X1
KO
K19607
X-linked retinitis pigmentosa GTPase regulator
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bspl03037
]
114847523 (rpgra)
Cilium and associated proteins [BR:
bspl03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
114847523 (rpgra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
114847523
NCBI-ProteinID:
XP_028993199
UniProt:
A0A6P7LHN9
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All DBs
Position
21:6618941..6627912
Genome browser
AA seq
1609 aa
AA seq
DB search
MTGQADEDVPETGTIFTFGKSGFAANVPSKFWLKNDHPVQISCGGEHTAVITENGRLLMF
GVNTWGQLGLGLKAAASKPVSVKALKSEKVKLAACGKNHTIVCTWRGNIYCVGNNQEGQL
GLGHCKNTPSFQLLHPFCDYAPLKMVSAGYNTSAALTEDGRLFVWGDNSVGQIGLGDEGF
AARPTQLDVGEAVIWVSCGNQHSALVTADGSLYTFGESAFGRLGLQVEQLANHRVPQQVQ
GIEGPVIQVSCGAEHTIALTDENVYTFGRGQYGQLGHGTFLFEVDLPKPLGHFSNSNVRH
VACGENHTAVITDSGLLYTFGDGRHGKLGLAEENFINQFSPTLCTRFIKHDVQLVSCGGD
HMLVLAAPRLLESQEVPERNVTIGDICLDPSYTEISLVGPTSLVPLSALHARARHREKQS
SAELFGKMFENLPHLHSGFLNTSWPTSRSILTTKTPSKNITSRSSSPKPQSDMAPSTPRS
PRSPSKASRSPLFSSVPSSPFSQSSHTTSKSKPKELPSSLLLPNSINKLNIPVSPGKTTK
QVHGAVTAKKNSNDKLSSAQSPVEPCSPNRPPPQVSNKHAREEEHAALPQTAGESIERQM
ITGERRRKKDNSKDLLSMERRKALPTEHLKVSSSLKRELSSLKITEKKQVTSKGKENVTN
QPMKTKTQDKQHQKDFSHLKSSKHGKAEQELGPKPTRSAQKALTEAQAKVKNRNLGDTNA
NRENVKYHTHREKTKAAAGANKATNRQEIRSIPEQSGRSTSVEGAKEEACVQSRTTDVKP
VEGEGQQEMQPVKSTSAQYLQKVKSITNKGQSKTLNVKSAQVKNAAGDETSLSLRSSPVK
VKGKRQHVTSTAVKSQSKHDENTKSRKEGNTVEKDPTPAKISSQKMKGKPADKLTLAGAD
SIKTESQKKSKESKLKGKARPEEIQMKGAANAESTGDKKAKVSKRTEASSLKEAANAVTS
QSCKRPEPVPNKSLQSSDPESTRDDAKPTPAYGEILTNVASLLPAAALAGSAVGLISDAV
TSIQSLQSDNDSATSQKKKQKQIMKQRAIMQHSFSSTLSDLSSASDQPGQSTKEAGSAVQ
EESNNSEAQEEDEEVESVEDDEEEKDSNDDEEEAEKETDNETDQDEGEEKTSSSSEEEDE
SSEKGDATEAEEEEAESEESSEEMNESESDSEVNEAAEDKEESETSSEAESNEEEEAETS
EDEEDEGGDESENTAESKSEETEDGDREGSDTSVADEDEEGETEEQKDDEDSTETEDKEK
SSEEGEETDENEEDNDDEKAEDTSDENEEEEEHSESEEDEDDGESEEKENKSEEEKNEED
EEEEEEEEEDEEEAVEEEEEEEESVEEEEEEEESVEEEEEEEEVAEEVEEGEEDEEAAEE
EEEGEEDEEAAEEEEEGEEESEYEEKQKTRTKKSMEPNKKIMVETEEEDEEEEEGDKEEE
EVEDSDDKKNDSLIKRKPEKRPQNQREERKPQQTKAKKGYDSEESEDESEEEEENEEEEE
REDEDEDEEEESEGKEVVPKGKQGKKLVKEEQETEEEEEGEEEEEEEEEEEEEKKENVKS
TKIKQDQPQKLKEKPKPAPRTRERTPGDKKPGESQQFWDNVLPQYLDLQ
NT seq
4830 nt
NT seq
+upstream
nt +downstream
nt
atgaccggacaggctgatgaggacgtaccggaaacaggaaccatattcacatttggcaag
agcggctttgctgctaatgtgcccagtaaattctggttgaagaatgaccacccagttcag
atttcatgcggcggagagcacactgcagtcatcacagaaaatgggaggctgcttatgttc
ggtgttaatacctggggccagctgggcctgggacttaaggctgctgccagcaaaccggtg
tctgtgaaagccttgaagtcggagaaggtgaaacttgcagcttgtgggaaaaaccacaca
atagtctgcacatggcggggtaacatatattgtgttggaaataaccaggagggacagctt
ggcttgggccactgtaaaaacactccatcctttcaactgcttcatcctttctgtgactat
gcaccactcaaaatggtgtctgcaggatataacacctccgctgccttaacagaggatggg
aggctgtttgtgtggggagacaactctgtgggacagatcgggttaggggacgaggggttc
gcagcacgacccacacagctggatgttggagaagcagtgatatgggtctcctgtgggaac
cagcactcagcgcttgtcacagcggatggaagcctttatacatttggagagagtgcgttt
ggaagactgggtctgcaggtggagcagctggccaatcacagagtcccgcagcaagtgcaa
ggcatcgagggcccggtcatccaggtgtcctgtggagcagagcacacgatagcgcttact
gatgagaacgtctacacgtttggcaggggtcagtacggccagctgggccatggcacgttt
ctgtttgaggtggacttgccaaaaccactggggcacttttccaacagcaacgtcagacac
gtggcctgcggagagaaccacacggctgttatcacagacagtgggcttctctacacattt
ggtgatggtcgtcatggaaaactgggcttagcagaggagaacttcatcaaccagttcagc
ccaacactttgtacacgctttatcaaacacgatgttcagttagtgtcctgcggtggggac
cacatgctggttctggctgcacccagactgctagagagccaagaagtgccagaaaggaac
gttacaattggggacatttgtttggacccaagttacacggaaatctctttggttggtcct
acttcactagtcccactctcggccctacatgctcgtgcccgccacagagaaaaacaaagc
tccgccgagctgtttgggaagatgtttgagaacctcccacatctacattccggcttcctc
aacacctcctggccaacatccagaagcatattaaccacaaaaaccccttcaaagaacatt
accagccgttcttcatcacccaaaccccaatcagacatggcaccgagcacaccacgctcc
cccagatctccttccaaagcatcccgcagtcctttgttttcctctgtaccatcaagtcca
ttttctcagtcatcacacaccacctctaagtctaagcctaaagagttgccttcatcctta
ctgttgcctaattccattaataaactcaacatcccagtctccccagggaagactacaaaa
caagtacatggagcggtgactgctaaaaagaactcaaatgacaaactgtcctcagctcaa
tcccctgtagaaccatgtagccccaacagacctcctcctcaggtttccaataaacatgcg
agagaggaggagcatgctgccttaccacaaacagctggagaatcgattgaaagacaaatg
atcactggagagagaagaaggaaaaaagacaattccaaggatttgttaagcatggagaga
agaaaggccttgcccacagaacacctgaaggtctccagctccttaaagagagaattgtct
tcactgaagatcacagaaaaaaagcaagtcacatctaaaggaaaagagaacgtaaccaat
cagcccatgaaaactaaaacgcaagacaaacaacatcaaaaggatttctcccatttgaaa
tcatcaaaacacggtaaagcggaacaagagctgggcccaaaaccgacacgctctgctcag
aaggcgctgactgaagcacaggctaaagtgaagaatagaaatctgggcgacactaatgca
aacagagagaatgtaaaatatcacacgcacagggagaaaactaaagcagcggcaggggcc
aataaagccacaaacagacaagaaatacgcagcatacctgagcaaagtggacgatcaaca
tctgtagaaggagcaaaagaagaagcatgtgttcagagtagaacaacggatgtaaaacca
gtagaaggtgaaggacaacaggagatgcagccagttaaatcaacttcagcacagtatctg
caaaaggttaaatctataacaaacaaaggtcaaagtaaaactctgaatgttaaatcagct
caagtgaaaaatgctgctggggatgaaacatcactaagtttgagatcttcacctgtgaaa
gtcaaaggaaagcggcaacatgtcacatccacggccgtcaaaagtcaaagtaaacatgac
gaaaatactaaaagtagaaaggaaggaaacactgtggaaaaagacccaacacctgccaag
atttcaagtcagaaaatgaaagggaagcctgcagataagctgacattagctggtgctgac
agcattaaaacagagagccagaagaaatccaaagaatctaagctgaagggaaaagcaagg
ccggaggaaatccaaatgaaaggagcagctaatgcggagagcacaggtgataaaaaggca
aaggtgagtaagcggactgaagcctccagcctgaaggaagccgccaacgctgtcacctca
cagagctgcaagagaccggagccggttcccaacaaatctctgcaaagctctgaccctgaa
agtaccagagatgacgctaagccaacgcctgcatacggagaaatcctcaccaacgtagca
tcgctccttcccgccgctgcgttggcaggctcagctgtggggcttattagtgatgccgtg
acaagtattcagagtttacagtcagacaatgactctgctacatcgcagaaaaaaaagcaa
aagcaaatcatgaagcaaagggcaattatgcagcattctttctcctccacgctatcagat
ttgtcctcagcatcagatcagccaggacaaagcactaaagaggctgggagcgcagttcaa
gaagaaagtaataatagtgaggcccaggaagaagatgaagaggtagaaagcgttgaagat
gatgaggaggaaaaagacagtaatgatgatgaagaagaggctgaaaaagagacagataat
gaaactgatcaggatgaaggtgaggagaaaacaagcagcagcagtgaggaagaggatgaa
agtagtgagaagggtgatgctacagaagctgaggaagaggaggcagagagcgaagaaagc
agtgaggaaatgaacgaatcagagagtgactctgaggtaaatgaagcagcagaagacaaa
gaggaaagtgaaacgtccagtgaagcagaaagtaatgaggaagaggaggctgagacgagt
gaggatgaagaagatgaaggtggtgatgagtcagaaaacacagctgagagcaagagtgaa
gaaactgaagacggcgacagagaaggaagtgacacttcagtagcagatgaagatgaagag
ggtgaaacggaggagcaaaaagatgatgaagattccaccgaaactgaggataaagagaaa
tcctcagaagaaggtgaggaaacagacgagaatgaagaagacaatgatgacgagaaagca
gaggacacgagtgatgaaaatgaggaggaagaggaacacagtgaatctgaggaggatgaa
gatgatggagaaagtgaggaaaaggaaaataagagtgaggaagagaagaacgaggaggat
gaagaggaggaagaagaggaggaagaggacgaggaagaagctgtggaagaggaagaagag
gaggaagaatctgtggaagaggaagaagaggaggaagaatctgtggaagaggaagaagag
gaggaagaagtagcagaggaggtagaagaaggggaagaagatgaagaagctgcagaggag
gaagaagagggggaagaagatgaagaagctgcagaagaggaggaagagggcgaagaagaa
agtgaatatgaggagaagcagaaaacaagaaccaagaaaagtatggaacctaataaaaag
atcatggtagaaactgaggaggaggatgaggaggaagaggagggggacaaggaagaagag
gaggttgaggatagtgatgacaaaaagaatgattccctcattaaacgaaaaccagaaaaa
agaccccaaaatcagagagaagaaagaaagccacaacaaaccaaagcaaagaaaggttat
gattcagaggaaagtgaagatgagagtgaggaagaggaagaaaatgaggaagaagaggaa
agggaagatgaagatgaagatgaagaagaagaaagtgaggggaaagaagtggtcccaaag
ggcaaacaaggtaaaaagcttgttaaagaggaacaggaaactgaggaagaagaagaaggt
gaagaggaggaagaggaggaggaagaagaggaggaagagaaaaaggaaaatgtcaagtca
acaaaaataaagcaagatcagcctcaaaagctgaaggaaaagcccaaaccagcgccgagg
acgagggagagaactccaggggacaagaagcccggcgagtctcagcagttctgggacaac
gtactgcctcagtacctggacctgcagtga
DBGET
integrated database retrieval system
