Betta splendens (Siamese fighting fish): 114847809
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Entry
114847809 CDS
T08231
Symbol
col8a1a
Name
(RefSeq) collagen, type VIII, alpha 1a
KO
K23455
collagen type VIII alpha
Organism
bspl
Betta splendens (Siamese fighting fish)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
114847809
NCBI-ProteinID:
XP_028993699
UniProt:
A0A6P7LIW9
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Position
21:complement(5851752..5860364)
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AA seq
746 aa
AA seq
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MRPLPAPLFLSLLQLAIITYAKGGAYYGHKQHPQQYQPMQHLQHIGMGKEGFPQQQYLGK
EVPYMQYPHYRKELPQIPMLKGNENARKGGGYKGIQDKGQTIPSGAEGIPSGPQGEAGPA
GPPGPQGPPGPPGPAGNGQPGQVGPPGPSGPQGVPGVGKPGVAGLPGKPGEDGEAGPQGE
MGPRGEEGPPGQSGPQGPPGPPGLPGIGRPGINGLPGQPGPKGEPGHKGLPGLPGLPGPK
GDKGIGQPGQPGHKGLPGLPGPAGPRGLPGFGKPGLNGAPGPQGPPGQKGHPGERGPAGS
RGEGGPPGPPGLPGQGKPGQNGLPGQPGMPGAKGHPGPSGLAGKPGLPGFGKPGLPGPKG
DKGMTGPNGPAGQKGDKGHAGLPGMTGPPGPNGPPGLPGPLGPPGGLGAPGPKGDCGDEG
AKGPDGAKGEPGIRGLPGKDGAPGESGEPGPRGPPGPIGAKGDGGHKGLPGNPGPVGPPG
PKGETGLPGEMGPQGPKGIPGIDGAAGPFGPPGLPGPKGDSGPPGLPGVAGEGSSGLPGP
IGPPGKEGPSGPPGQPGQPGPPGPPGPPGVSGLSPEMSGVLSEMGPALDGVKAGGYGKKG
KYGGNGAEVMGASGLEMPAFTAVATTPFPPVGTPVVFDKLLYNGRQSYNPQTGIFTCDMP
GIYYFAYHIHCKGANVWVSLMRNNEPVMYTYDEYKKGFLDQASGSAVLPLQLGDTVHIQL
PSDQASGLYAGQYVHSSFSGYLLYPM
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcctctccctgcccccttattcctgtctctgctacagcttgcaataatcacgtat
gcgaagggtggcgcttactatggacacaagcaacaccctcagcaataccagcccatgcag
cacctccaacacattggcatgggcaaagaaggatttccccagcaacagtacctgggcaaa
gaggtgccctatatgcagtacccacactacaggaaggagctcccacagataccgatgctc
aaaggcaatgaaaatgctcgtaaaggagggggatataaaggaatccaggacaaaggtcag
actattcctagtggtgctgaaggaatacctagtggtcctcaaggagaggcaggaccagct
ggacctcctggaccgcagggacctccagggcctccgggacctgcagggaatggacagcca
ggacaagtagggccacctggaccttctgggccacaaggagtgcctggtgtgggaaaacca
ggagtagcaggacttccaggaaaaccaggagaagatggtgaagctgggccacaaggagaa
atgggacctaggggtgaggaagggcctcctggacaatcagggcctcagggtccccctgga
ccacctgggcttccaggaataggtagaccaggcataaatggattaccaggtcaaccaggt
ccaaaaggagagccaggtcacaaaggtcttccaggattaccaggattaccaggacccaaa
ggcgacaagggtataggtcaaccaggacaacctggccacaaagggctcccagggcttcca
ggaccagctggtccaagaggacttcctggttttggaaaacctgggttgaatggagcacca
ggcccccaaggaccaccaggacagaaaggacatcctggtgagcgaggaccagctgggtca
cgtggtgaaggagggccacctggcccaccaggactacctgggcaaggtaagccaggtcaa
aatggcctgccaggacaaccaggcatgccaggtgctaaaggtcatccaggaccatcaggt
ttggcagggaagccaggactgcctggatttggtaaaccaggacttccagggccaaagggt
gacaaaggtatgactggaccaaatggacctgcgggacaaaaaggagataaaggacatgca
ggactacctggtatgactggacctcctggaccaaacggaccaccaggtctcccaggtcct
ttgggaccaccaggaggtttaggtgcacctggtcctaaaggagactgtggagatgaaggg
gctaaagggccagatggagccaagggtgaacctggtatccgtgggttacctggtaaggat
ggtgcccctggagaatctggagagccaggaccaagaggtccacctggaccaattggtgcc
aaaggagatggtggacataaaggtcttcctggtaatcctggtcccgtaggacctccagga
ccaaaaggagaaactggattacctggtgaaatgggacctcaaggtcccaaaggaattcca
gggatagacggtgctgcaggaccatttgggcctccgggccttcctgggccaaaaggagat
agtggtcctcctggtctaccaggagtagcaggtgagggaagctcaggtcttcctggtccc
ataggaccaccagggaaagagggcccatctgggcctcctggacaaccaggtcaacctggc
cctcctgggccaccaggtccacctggagtatctggtctttctccagagatgtctggggta
ctgtctgaaatgggtcctgcactagatggtgtgaaggctggtggttatggaaaaaagggc
aaatatggaggtaatggagcagaagtgatgggtgccagcgggctggaaatgccggcattc
acagcagtagcaacaactccctttccacctgtgggaactccagttgtctttgacaagctc
ttgtacaatggtcgccaaagttacaatccccagacaggaatctttacttgcgacatgcct
ggcatttattactttgcgtatcacatccactgcaaaggggctaatgtatgggtgtctttg
atgaggaacaatgagccagtgatgtatacatatgatgaatacaaaaagggtttcttagac
caagcatcaggaagcgcagtattacctcttcaacttggggacactgtacatattcagctg
ccctcagatcaggcctcaggactttatgctgggcaatatgtgcactcctccttctctggt
tacttgttatatccaatgtaa
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