KEGG   Betta splendens (Siamese fighting fish): 114847963
Entry
114847963         CDS       T08231                                 
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
bspl  Betta splendens (Siamese fighting fish)
Pathway
bspl03082  ATP-dependent chromatin remodeling
bspl03083  Polycomb repressive complex
bspl04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:bspl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    114847963 (rbbp4)
   03083 Polycomb repressive complex
    114847963 (rbbp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    114847963 (rbbp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bspl03036]
    114847963 (rbbp4)
Chromosome and associated proteins [BR:bspl03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     114847963 (rbbp4)
  Histone modification proteins
   HAT complexes
    HATB complex
     114847963 (rbbp4)
   HDAC complexes
    Sin3A-HDAC complex
     114847963 (rbbp4)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     114847963 (rbbp4)
    PRC2.2
     114847963 (rbbp4)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     114847963 (rbbp4)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    114847963 (rbbp4)
  Chromatin remodeling factors
   NuRD complex
    114847963 (rbbp4)
   NuRF complex
    114847963 (rbbp4)
   NuRF complex (fruit fly)
    114847963 (rbbp4)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 CAF1C_H4-bd WD40 WD40_CDC20-Fz Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st WD40_Gbeta DSE1_N Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd EIF3I Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd WD40_RFWD3 Beta-prop_DCAF12 WD_LRWD1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_1st Beta-prop_NOL10_N eIF2A WD40_MABP1-WDR62_1st ASA1 MIOS_WD40 CFAP251_N Beta-prop_SPT8 PAC11 Beta-prop_IFT140_1st DNAI3_WD NBCH_WD40 Beta-prop_DCAF4 Beta-prop_VPS8 Beta-prop_WDR41
Other DBs
NCBI-GeneID: 114847963
NCBI-ProteinID: XP_028993817
UniProt: A0A6P7LHY9
LinkDB
Position
22:10109983..10113507
AA seq 426 aa
MADKDAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
YSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLSGSLLSASDDHVRTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLL
HESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTV
ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPED
AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAA
DSEVQA
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggccgataaagacgctgcgtttgatgatgctgttgaggaaagggtaatcaatgaggag
tacaagatctggaagaagaacactccattcctctatgacctggtcatgactcacgccctg
gagtggcccagcctcacagcacagtggcttccagatgtcaccaggccagagggaaaggac
tacagtgtgcacagactggttctgggaacacatacttctgacgaacagaatcaccttgtg
attgccagcgttcagctcccaaatgacgatgcccagttcgatgcatcacactatgacagc
gaaaaaggagagtttggagggtttggatcagtaagtggaaaaatagagattgaaataaag
atcaaccatgaaggagaagtgaacagagcccgttacatgcctcagaatccttgcattatt
gctacaaagactcctaccagtgatgtattggtcttcgattatacaaaacacccctctaaa
cctgatccttctggagaatgcaccccagatctgcgcctgagaggccatcagaaggagggc
tatggcctttcttggaatccaaacctcagcggctctcttcttagtgcttctgatgaccac
gtaagaactatctgcctgtgggacatcagcacagtgcccaaggagggaaagattgtagat
gccaagaccatcttcacaggccacactgctgtggtggaggacgtttcctggcacctgctc
catgagtcactgtttggatctgtggccgacgaccagaagcttatgatatgggacacacgg
tccaacaacacctccaaacccagccatgcagtggatgcccacactgctgaggtcaactgc
ctgtcttttaatccctatagcgagttcatcctggccacgggctccgcagataagactgtt
gctctgtgggaccttaggaacctgaagctgaagctacactcatttgagtctcacaaagac
gagatcttccaggttcagtggtcccctcataatgaaactattctggcatccagcggcaca
gatagacgactcaacgtctgggacctcagtaagattggagaggagcagtctccagaagat
gctgaggatggtcctcctgagctgctgttcatccacggtggacacacagctaagatttca
gacttctcgtggaatcccaatgagccgtgggtcatctgttctgtgtcagaggacaacatc
atgcaagtttggcagatggctgaaaacatctacaatgacgaggacccagaaggtgctgca
gattcagaagtccaggcatga

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