Betta splendens (Siamese fighting fish): 114848079
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Entry
114848079 CDS
T08231
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03013
Nucleocytoplasmic transport
bspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114848079 (srrm1)
03015 mRNA surveillance pathway
114848079 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114848079 (srrm1)
03041 Spliceosome [BR:
bspl03041
]
114848079 (srrm1)
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114848079 (srrm1)
Spliceosome [BR:
bspl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
114848079 (srrm1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
114848079
NCBI-ProteinID:
XP_028994081
UniProt:
A0A6P7LHD6
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Position
22
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AA seq
857 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKHKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFIFNQLEEKHPDAKVMQINLTGFLNGKNAREFMKDLWPLLLSAQENIAGIP
SAFLEQKKEEIKQRQIEQEKLASLKKGDEDKKEKDRERAQSKSPRRRKTRSPSPRRRSPV
KRDRKRSPSRSPRRKPSPVGGSSPPPPLMQLPTKPTEQLADSDPSGRAMQEEVIQEASIC
DTVVEVVKADSVTEVKEPSPEKTHKKEQRPRSREREKDNRRERPHHRSRSHSRSRRRRSR
SRSYSPRRRQSPRRRMSPRRRSPPRRGPAAARHRHRRSPIRRRRSRSASSSGSSSSGSRS
PKKLMKRISSTPPRKPVLHPDTSISPAGRDRRSLSPRARRSRGSPSPPRSSGLKRKQGGR
GPSPSDNAKPRLSDGSESEEDKNEKGATADSVQQRRQYRRQNQQSSSDTGSSSSEEEGPK
RPTAGSSARNGEVRRRRSRTPSPRRRHRDPSPRKRRSPSPGRRRRSPSPLRRRRSLSPPR
RRSPSPPPCRRSPSPRRYSPPIQRRYSPSPLPSQKRKMSSSPTKRPSPLPKRRPSRSPKR
RSSPQRRRASPSSSPPRHRRSPMLPSGRLGRDVRSPVRAVNRLSPSPANRNRNVRGSTSP
QRRFESSISPSNHRRQQSPSHSGKPFRRVSRTPEPRNNQRPSPSPQPMRRASSRSRSVSP
RPAAQKHLVPASGSPSPSRSVSGSPPPAKKASSGGSGSQSPSKQNSDVEGSGKKKKKKKE
KKHKKDKKHKKHKKHKKEKAGATASGETQETQGVEDGDSRKESDSEVEDSLDDLEKHLRE
KALRSMRKAQLSPSQMS
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggcacgagtgcggagcaagacaaccgtttcagcaacaag
cacaagaaactcctgaagcagctgaaatttgcagaatgcctggacaagaaggtggacatg
accaaggtgaacttggaagtcatcaaaccttggattacacagcgtgtaaccgagattctg
ggttttgaggatgacgtcgtcatagagttcatatttaaccagcttgaggaaaagcaccca
gatgccaaggtgatgcaaatcaacctaactggcttcctgaatggaaagaatgcccgagag
ttcatgaaggacctgtggcccctgctactgagtgcccaggagaacattgctggcatacca
tctgcttttctagagcagaagaaagaggaaattaaacagagacagattgaacaggagaag
cttgcgtcactaaaaaagggtgatgaggataagaaagaaaaggatagagagagggctcag
tcaaagagtccacggaggcgaaagacaaggtcaccatcaccacggcgaaggtcacctgtg
aagcgagatagaaaacgtagcccctcgcgctcccctaggcgcaaacccagtccagttggt
ggaagttcacccccgccgcccctcatgcagctgcccacgaaacccacagagcagcttgca
gattcagatccatcaggaagagcgatgcaagaagaagtcattcaagaagcttccatctgt
gatacagttgtggaggtggtaaaagcagactctgtgactgaagtcaaggagccctctcca
gagaaaactcataaaaaagagcaaaggcccaggtcccgggagagggagaaggacaaccgg
agggaaaggcctcaccatcgatctcgttctcattcccgctctcgcaggcgtcgttcccgt
tctcggtcttactctcctcgtagaaggcagagtcccaggagaagaatgtctcctcgtagg
agaagccctcccagacgtggccccgctgccgcaagacacagacataggcgctctcctatt
cgcaggaggcgctctcgctctgcttcatcctctggaagcagctcctcaggctctcgctca
cccaaaaaactgatgaaaagaatatctagcacacctccacgaaaaccggttcttcaccct
gacacctccattagcccagcagggagggatagacggtcgctgtctccacgtgccagaaga
agccggggctccccttccccacccagatcctctggtttaaagagaaaacaaggaggaaga
ggtccttctccatctgataatgcaaaaccaagactgtctgatggctctgagtctgaggag
gataaaaatgaaaaaggggcaacagcagattcagtgcagcagcgacgtcagtatcgcaga
cagaatcaacagtcatcttcagacacaggatcttcctcatctgaagaagagggacccaag
agaccaacagcagggtcaagtgctagaaatggtgaagtcagaagaaggcgcagccgtact
ccttctccacgcagacgacacagggatccgtctccaaggaaaaggagatctccatctcca
ggacgcagacgtcgttccccttctccactgcgacggcgcagatctctttctccgcctaga
cgccggtctccttccccgcctccctgtcgtagatctccttccccaaggcgatattctccc
cctattcagcgtcgctacagcccgtcccctttgccgtctcagaaaagaaagatgtccagc
tctcccacaaaacgcccttccccactgcccaagcggcgtccctcaaggtctcccaagcgc
agaagttctcctcagagaagacgtgcatctccatcttcctctccaccaagacacaggagg
agccccatgttgccttctggtcgcctaggcagagatgtacgatcccctgttagggcagtc
aaccgcctctccccgtcacctgcaaaccgtaaccgcaatgttaggggctctaccagtcca
cagagacgtttcgaatcctccatatctccatctaatcaccggaggcagcagtccccttca
cacagcggcaaaccgtttcgcagagtgtcccgtactccggagccacgcaacaaccagaga
ccctctcctagcccccagcctatgagaagagcatcttccagatcaagatcagtttcccct
cgtccagcggctcagaaacatcttgtccctgcatctggctccccatctccttctcgctct
gtcagtggatccccacctccagccaaaaaggccagcagcggcggttctggcagccagtct
ccaagcaagcagaactccgatgttgagggcagtggaaagaagaagaagaagaagaaggaa
aagaaacacaagaaagacaagaaacacaagaagcacaagaagcataagaaggaaaaagct
ggtgccactgcgagtggagagacacaagaaacccagggtgtggaggatggagattcaaga
aaggaatcagactcagaagttgaggacagcttggatgatctagagaagcaccttagagag
aaggctctgcgctccatgaggaaggctcaactgtctccctcacagatgtcctga
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