Betta splendens (Siamese fighting fish): 114848202
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Entry
114848202 CDS
T08231
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bspl03036
]
114848202 (msh4)
Chromosome and associated proteins [BR:
bspl03036
]
Eukaryotic type
Meiosis-specific proteins
Others
114848202 (msh4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
AAA_23
Motif
Other DBs
NCBI-GeneID:
114848202
NCBI-ProteinID:
XP_028994341
UniProt:
A0A6P7LI42
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Position
22:complement(2870445..2876074)
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AA seq
917 aa
AA seq
DB search
MFHIGTEEVTTGGERSEPLGTPEVTPVDRTGPETTPYGPASASSQSSRPSRDGASASSGY
CAGLCVEGRFQHVVSAGGSHLPVPSSVSYESSICSRGGTPGLRRTPGSCGGRPARTPLPD
HTATSSSSANASSGASVVVAVVEGRGLARGEIGMASLNLKCPELVLSQFADTGTYAKVIT
KIHILVPLEILMPDTSSEKGKGTKLFNLITENFPGVAFTAIQRKYFNERKGLEYIQQLCT
PEFGTVLMEVQAKYYCLATAAALLKYLEFIQNSVYAAKSLKVIFKGSEQTAMIDSASATN
LELVTNNRNHRSEHTLLGVLNYTKTPGGARRLRSNLLEPLLDVDTISIRLDTIQELLENE
ELFFGLKNAIGHFLDIDQLLSVLVQIPKQETVQVAEAKITHVIQLKHTLDLVPRLRMTLK
NCNTALLKAYSASLDDDRFDMILEQIKTVINDEITYMKGSLNMRTQKCYAVRPNINQFLD
IARRAYTEIVDDIAGLVNQMGEKYGLPMRTSFSTARGFFIQVKLEGVALPEGKLPSEFIK
VTKNKNNYGFTTVDLMRMNDRCDEALREIFHISYVVICQLLHTIHEHIHCLYKLSDAVSM
LDMLLSLANACTVSDYVRPEFTDTLAVKQGRHPILERISGQQPISNNSYISMGSNFVIIT
GPNMSGKSTYLKQVALCQIMAQIGSFVPAEYASFRVADQIFTRIGVDDDFETNSSTFMLE
MKEISYIIHNASDRSLIIIDELGRGTSAEEGIGICHSVCEFLLSLQAFTLFATHFLELCQ
LEALYPNVENQHMEVQHTRSRDTGAEHVEYTYLIKRGCSEERHYGLKAAEMTALPSTITQ
EAKTIASKVSQQLLAKHHSDPETQRQRAVYHLATRLLQAARNSRLDPDSLRMYLKGLKKQ
YEAEVQAIGQSMDVEEE
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgtttcatatcggcacagaggaggtaactaccgggggtgagaggtcagagcctttagga
accccggaggtgaccccggtggacagaactgggccagaaaccaccccgtacgggcccgcg
tctgcgtcctcacagtcaagccggccaagccgggacggagctagcgcgagctccggctac
tgcgcagggctttgtgttgaaggccggttccagcacgttgtcagcgcaggcgggtcacat
ctgcccgtgccgtcgtctgtatcgtatgaatcctccatctgcagccgtggaggaacacca
ggactcagaagaacccccgggtcgtgtggcggacgccctgctcggactcctctgcccgat
cacactgcgacaagcagctcctcggccaacgcgtcctccggtgcctcggtggtcgtggca
gtggttgaaggccgtggtttggccagaggcgagatcggcatggctagcctcaacttgaaa
tgtccagagctggtcctgtcacagtttgcagacacaggcacctatgccaaggtcataacc
aaaattcacatcttggtgccattggaaattctgatgccagacacatccagtgaaaagggg
aaggggacaaagctgttcaacctcatcaccgagaacttcccgggtgtagcattcactgca
atccagaggaagtactttaatgagaggaaaggactagagtacattcagcagctgtgtact
ccagaatttggcactgtcctcatggaagtgcaagctaaatattattgcctagcaactgca
gctgctttgctgaaatacctggagttcatccagaactctgtctacgctgccaagtctctt
aaagtgatttttaaagggagcgaacagacggctatgattgactcagcatctgccactaac
ttggagttagtcacgaataatagaaaccacaggagcgaacatacacttttaggggtactt
aactacacgaagacacctggtggtgccagaagattgcgctccaatcttctggagcctcta
cttgatgtggacaccatcagcatacgcttggataccatacaggaactgctagagaatgag
gaactcttctttggtctgaagaatgctatagggcatttccttgacattgaccagctgctc
tctgttcttgtccaaattccaaagcaggaaaccgttcaagtggcagaggcaaagataacg
catgtcattcagctgaaacacacactggatttagtgccaaggttgaggatgacactgaag
aactgcaacacagccctgctgaaggcatacagtgcctcactggacgacgacaggtttgat
atgattctggagcagatcaagacagtgattaatgatgaaattacctacatgaaggggagc
ctgaacatgcgcacccagaagtgttacgccgttcgccccaacatcaatcagttcctggat
attgcccggagagcgtacaccgagatagtagacgacattgcagggctcgtgaaccagatg
ggggagaagtatggtttgccaatgcgtaccagcttcagcacagctagagggttctttatc
caggtgaaacttgaaggagtggctttacctgaaggaaagctgccctcagagttcattaag
gttactaagaataagaacaactatggcttcaccactgtggacctgatgaggatgaatgac
cgttgtgatgaggcactgagggagatctttcacatctcctatgtggtgatatgtcaatta
ctgcacactatccatgagcacatccactgcctctacaagctgtctgatgctgtatccatg
ctggacatgctgctgtcgcttgcaaatgcatgcaccgtctcagactatgtgcgtccagag
ttcacagacacgctggccgtgaagcagggtcgccaccccatcctggagcgcatatctgga
cagcagcctatttcaaacaatagctacatttcaatgggcagcaactttgtcatcatcact
ggacccaatatgagcggcaaatcaacctacctcaaacaggtggcactttgtcagatcatg
gcccagataggctcttttgtccctgctgagtatgcctcttttcgtgttgctgatcagatt
ttcaccagaattggtgtagatgatgattttgaaacgaactcttccacatttatgctggaa
atgaaagagatctcctacataatccacaatgcaagtgacaggtccctaatcatcatagat
gagctgggacgtggcacgagtgctgaggagggcattggcatttgtcactcggtttgtgaa
ttcctccttagcctccaggcgttcaccctctttgcaacacacttccttgagctgtgccag
ctggaggctctttatcccaacgtggagaaccaacacatggaagttcagcatactcgcagc
agggatactggtgctgagcatgtggagtatacgtacttgataaaacggggctgctctgag
gaaagacactatggcctaaaggcagcagaaatgaccgcccttccctcaacaataacccaa
gaagcaaagacaattgcctcaaaagttagccagcaacttctggccaaacatcatagtgat
ccggaaacacagagacagagagctgtgtaccacctggccactcgcctcctgcaggctgcc
aggaactccagactggacccagacagcctgcgtatgtatttgaaaggcctgaagaagcag
tatgaggcagaggtgcaggccataggccagtcaatggacgtagaggaggaataa
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