Betta splendens (Siamese fighting fish): 114848335
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Entry
114848335 CDS
T08231
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114848335 (wdr43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bspl03009
]
114848335 (wdr43)
Ribosome biogenesis [BR:
bspl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
114848335 (wdr43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp12
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_RIG_2nd
Beta-prop_SCAP
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
114848335
NCBI-ProteinID:
XP_028994586
UniProt:
A0A6P7LIP2
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All DBs
Position
22:complement(14265980..14274523)
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AA seq
648 aa
AA seq
DB search
MAADGGSSFLQLPCVFSPKSKQYLALCAQDGRLRVWNTDSKTLHQEYVPSSHLSATCTCI
AWGPCRTVKEGPQRKKRKSEAVQVEVKPDLLAMGTAVGTVLIYSAAKGALQCTLDGGHSG
GVNCVQWHPEDSLLYSGSDDTNIIEWDLQTGKMRSKWKADRAAVTSLCVSPDGKLLLSAG
QIIKMWNLATKEIYRKFTGHTTSVTTLRFATSRTPDSNGLYFLSGAAHDRLLSVWQVRED
GKDKNSVVSFTLTAEPQNIDLITSNSKEEAVRLAVVCKDGQLHFFEHFLNGPCKKPLAPS
CTVQMCDTKDSPAPIPLLAAALGADPRTVLLAYGNHLQPVIEKVEINTAEKRISLTRDVQ
TSLSLSMETSISKVKTPVVNISSKVLVPGVPGHQAPVKGAPQASGKRKKDTDTKEMSIAE
RLGEVSLSEVSTEKGATKGVASLQTDNFAVLLVQGLESSDASILNKVFQTRKEMVIRKTV
ARLPVPAVLPLVEEITKRIQGHPFMAVLMVRWLKAVLINHTSYLVSLPDVVSQLAVLYHM
IESRVKMFHKLSKLHGKLYLLMTQVPTSDSSNNVTDADHTAKLVYEEESSDEDDASGDEA
LPDDDSDNWEEEEAMEEKMAEDHSDDPDGTESQANGQEDMQQEEYEDD
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgacggtggcagttcttttctgcagctaccctgcgttttttcacccaaatca
aaacagtatttagcgttgtgtgctcaggacggcagacttcgcgtgtggaacacagacagc
aaaacacttcatcaagaatatgtgccttcatcccatctgagtgctacatgtacctgcata
gcatggggaccatgccggacagtgaaggaggggcctcagaggaagaagaggaaatcggag
gcagtgcaggtggaggtgaagccagacctgctggcgatgggcacagccgtaggaactgtg
ctgatctatagtgcagcgaagggagcgctgcaatgtaccctggatgggggccatagtgga
ggagtgaattgtgttcagtggcatcctgaagacagtttattatacagcggttcagatgat
acaaacattattgagtgggacctgcagaccggcaagatgcggagtaagtggaaggcggac
cgtgcagcagttaccagcttgtgcgtgagccctgatggcaaactgctgctttcagctgga
cagataatcaagatgtggaacttggccaccaaggagatttacagaaaattcacaggtcac
accacgtctgtgacgaccctgcgctttgccacctcacgtactcctgacagtaacggcctg
tatttcctgtccggggctgctcatgatcgactactcagtgtctggcaagtgcgagaagac
ggtaaggacaagaactcggtggtgtccttcacactgacagctgagccacagaacatcgac
ctcatcacatcaaacagcaaagaagaggcggtacggttagcagtggtgtgtaaggatggg
cagctgcatttcttcgagcactttttgaatgggccctgtaagaaacccttggcaccttca
tgtacagtgcaaatgtgtgacaccaaggactccccagccccgattcccctgctggcagct
gcccttggagcggatcctcggaccgtgctgctggcctacggcaaccacctacagcctgtg
attgagaaagtggagatcaacacagcagagaaacgcatcagtttgactcgagatgttcag
accagcttgtccctttccatggagacctccatttccaaggtgaaaaccccagttgtgaat
atcagtagcaaagtactggtcccaggagttcctggacatcaggccccagtgaagggagct
ccccaggcatcagggaagagaaaaaaagacacggacaccaaagagatgtcgatagcagag
cgactgggagaagtcagtctgtctgaagtctccacagagaagggggctacaaaaggagtg
gcctccctacaaacggataacttcgcagtcctgctggtgcagggccttgagagcagtgac
gccagcatccttaataaagtgtttcagactcgcaaagagatggtcataaggaagacggtt
gcccggttaccggtacctgctgttttaccattggtggaggaaatcacaaagagaatccaa
ggtcaccccttcatggcagtgctaatggtgcggtggctcaaggctgtactaattaatcac
acatcatacctggtgtcgctgccagatgtggtttcccagctggcagtgctttatcacatg
attgaaagcagagtgaagatgttccacaaactatcaaagctgcatgggaaactgtatttg
ctaatgacacaggtgccgacaagtgacagcagtaacaacgtcacagatgctgaccacaca
gccaagctggtgtacgaagaggaatcatctgatgaagatgacgcgtctggtgatgaagcg
cttcctgatgatgactctgataactgggaggaagaggaggcgatggaggagaaaatggcc
gaagatcacagcgacgaccccgatggaacagaatcccaagctaacggccaggaagacatg
cagcaagaggaatatgaggatgattga
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