Betta splendens (Siamese fighting fish): 114848677
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Entry
114848677 CDS
T08231
Symbol
pcdh7b
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-7b
KO
K16498
protocadherin delta 1
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
114848677 (pcdh7b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bspl01009
]
114848677 (pcdh7b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bspl04515
]
114848677 (pcdh7b)
Protein phosphatases and associated proteins [BR:
bspl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114848677 (pcdh7b)
Cell adhesion molecules [BR:
bspl04515
]
Cadherins
Protocadherins
114848677 (pcdh7b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Mid2
TMEM154
Gp80
Adeno_E3_CR2
DUF1180
Motif
Other DBs
NCBI-GeneID:
114848677
NCBI-ProteinID:
XP_028995248
UniProt:
A0A6P7LN35
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All DBs
Position
2:22394236..22484123
Genome browser
AA seq
1261 aa
AA seq
DB search
MRTTGAVDYLYYCVLILQLVHQPAAKQVLRYRLAEEGPADIRVGNVAGDLGIVAGSGEVT
FTLESGSDFFKIDNITGELTTNERRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWVD
LFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQD
NGENSRRLGSSGDSYSGKRRFEEGASRSSVFELQVADTTDGEKQPQLIIKGALDREQRDS
YELTLRVRDGGDPPRSSQAILRVMITDVNDNSPRFEKSVYEADLPENSSPGAPILQLKAA
DADVGVNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREEVTQLRFTVMARDRGQP
PKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGIANVAEDVVVDTPIALVQVSDRDQG
ENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLHTSAPLDYEATQEYNVVIVAVDSGSP
SLASNNSLIVKVGDTNDNPPIFSQNIVEVSFPENNAPGERVTTVAAIDADSGKNAEIAYS
LDSSVNGIFSIDADSGDIRVNTILDREHTERYEFKVIAKDKGINTLQGSATVVVLVADKN
DNEPKFMQDVFTFYVKENLEPNSPVGMVTVIDADKGQNAQMSLFIEEEEDIFSIENDTGT
IFSTLSFDREQKTTYTFRVKAVDGGEPPRSATATVSLFVMDENDNAPTVTFPINSSYTLL
PPSSNVRTVVRTVLATDSDTGINADITFSIIGGNPFKLFEIDGGTGVISLVGKLEQKHYG
LHRLVVQVNDSGQPSQSTTTLVHVYVNETVSNSTVVETQVAKSLSTSLNTNIAGDPNYDL
SKQRLSIVIGVVSGIMTVILIILVVVMARYCRPKNKNGYEAGKKDHEDFFTPQQHDKSKK
PKKDKKKQKSKQPLYSSIVTVEASKPNGQRYDGVNEKLSDSPGMGRYRSVNGGPGSPDLA
RHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGTGDNISLGSDHCSEYSSQTIN
KYNKQPFRRVTFSVVSQPQDPHQQGSLQSCYDSGLDESETPSSKSSSGPGWAPFPCPRTA
TRGQRRMAVSVRQSTWKMEKKSIKNSRPLPDVAMTGKCTRECDEYGHSDSCWMPVRTSPE
RRPSKSTTTPQQPKLSTFMSGNGSGSSSAEQPGSQETLAMAAMANGDPTASHMMGDRNRN
LLNKKMASSSSSYEAFSSPSYGSPGGGEEVLGHPTEEIPLAPTGEYKPTTCGTLTRREVY
L
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgaggactactggtgcagtggactatttgtactattgcgtgctcatcctgcagctcgtg
catcagcccgcagccaagcaagtgctccggtaccgcttggctgaggagggacccgccgac
atccgagtcggcaacgtagccggcgacctgggcatcgtcgcggggtccggcgaggtgacg
ttcacgctggaatccggctccgattttttcaaaatagacaacatcacaggtgagctcacc
accaacgaaaggcggatagaccgtgagaaactgcagcagtgccaaatgatatttgatgaa
aacgagtgttttatagattttgaagtgtcagtcatcggaccggcccagagctgggtcgac
ctctttgagggaaaagtcattatattagatatcaacgacaacactccctcgttcccttct
cctgtcctgacactttctgtggaggagaacagacccattggaaccctttatctgctgccc
acagccacagaccgagattttggcagaaatggaatagagagatatgagcttatccaggac
aatggggagaactcaagacgtctgggctcctctggggattcgtactcaggcaagaggaga
tttgaggaaggcgcgagcaggagcagcgtctttgaactgcaagttgctgacaccactgac
ggagagaagcagcctcagctcatcattaaaggggcccttgatagggaacagagagactcc
tatgagctcacgctgcgcgttcgggatggaggagaccctccgcgctcctcccaggccata
ctgagggtgatgatcaccgacgtgaatgacaacagcccccgcttcgagaagagcgtgtac
gaagccgacctgccggaaaacagctcccccggcgcccccatactgcagctcaaagcggcc
gacgccgacgtgggggtcaacggccagatcgagtacgtgttcggggccgccaccgagtcg
gtgaggaggctgctgaggctggacgagagcacggggtggctgagcgtgttgcaccggatt
gaccgcgaggaggtgacccagctgaggttcacggtgatggcccgcgaccggggccagcca
ccgaaaatggacaaggccactgtggtgttgaacatcaaggacgagaacgacaacgtcccc
gccattgagatacggaaaatcggccgcatcttcttgaaagacgggatagcgaacgtggcg
gaggacgtggtggtggacacgcccatcgctctagtgcaggtgtcagaccgtgaccagggg
gagaacggtatcgtgacctgcactgtagtcggggatgtgccctttcagctgaaaccggcc
agtgaaatggagggcgagcagaacaaaaagaagtatttcctccacacatctgcgccgctg
gactacgaggccacacaggaatacaacgtggtcatagtggccgtggactcaggaagcccc
agtctggcaagtaataactctcttattgtcaaagtgggcgacactaacgacaaccctccc
atcttcagccagaatatagtagaggtgtcgtttccagaaaacaatgcccccggtgagagg
gtgacaacagtggcagccattgacgcagatagcgggaagaacgctgaaatagcctattcc
cttgactcatcagtaaatgggattttctctatcgatgcagacagtggagacatccgtgta
aacaccattctggatagagagcatacagagcgctacgaattcaaagtgatagccaaagat
aagggcataaacacccttcagggctccgcaacagtggtcgtccttgtggccgataagaac
gacaatgaaccaaagttcatgcaggacgtgttcaccttctatgtcaaagaaaaccttgag
ccaaacagcccagttggcatggttacagtcattgatgcagataaaggccaaaatgcacag
atgagtcttttcatcgaagaagaggaggacatcttctccattgagaatgacactgggact
attttctccaccttgtccttcgaccgggagcagaaaaccacgtacaccttccgcgtcaag
gccgtggatggcggcgaacccccgcgctccgccaccgctacggtgtccctctttgtcatg
gacgagaacgacaacgcgcccacggtcacgttccccatcaacagctcctacacccttctc
cccccctccagcaacgtcagaacggtggtgcgaaccgtcctggccactgacagcgacacc
ggcatcaacgccgacatcaccttcagcatcatcgggggaaaccccttcaagctgttcgag
atcgacggcggcaccggggtcatttcgctggtgggcaaactggagcagaagcactacggc
ctccaccggctggtggtgcaggtgaacgacagcgggcagccgtcgcagagcaccaccacg
ttggtccacgtgtacgtgaacgagacagtctccaactccactgtcgtggagacccaggtg
gccaagagcctgagcacgtccctcaataccaacatcgcaggcgaccccaactatgacctc
agcaagcagcggctgagcatcgtgatcggggtggtttccggcatcatgaccgtcatcctc
attatcctcgtggttgtcatggcccgctactgtcggcccaagaacaagaacggctacgag
gccggcaagaaggaccacgaggacttcttcacgccgcagcagcacgacaagtccaagaag
cccaagaaagataagaagaagcagaagtccaaacagccgctgtacagcagcatcgtcacc
gtggaggcctccaagcccaacgggcagcgctacgacggcgtcaacgagaagctgtcggac
agcccaggcatgggccgctaccgctcggtcaacggagggcccggaagcccagacctggcc
cgccactacaagtccagttcgcctctacccactgtacagcttcacccgcagtccccgacc
gcggggaaaaagcaccaggccgttcaggacctgccccctgccaatacctttgttggcacc
ggagataacatttcccttggatctgaccactgctctgaatacagcagccagaccatcaac
aagtacaacaaacagccgtttcgccgagtgaccttctcggtggtgagccagccccaggac
cctcaccagcagggatcgctgcagagctgctacgacagcggcctggatgagtcggagacg
cccagcagcaagagttcgtcgggccccggctgggcgcccttcccctgcccgaggacagct
acgagaggacaacgccggatggcagtgtcggtgaggcagagcacatggaaaatggagaaa
aagagcattaaaaactctcggcccttgcctgacgtagccatgaccggcaagtgcacccgg
gaatgcgacgagtacggccactcggactcctgctggatgcctgtgcgcacgtcgcccgag
agacggccatcaaagtcaaccaccaccccccaacaaccaaagctttccactttcatgagc
ggcaacggtagcggcagcagcagcgccgagcagcctggaagccaagagaccctcgccatg
gccgcgatggccaatggagaccccaccgcctcgcacatgatgggcgaccgcaatcgcaac
ctgctcaacaaaaagatggcctcctcctcctcctcctacgaggcgttcagctcgccttcc
tacggctcgccaggaggcggggaggaggtgctgggccaccccacagaggagatccccttg
gcacccactggggagtacaagcccacaacttgtggtactctcacgcggcgggaggtgtac
ctgtag
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