Betta splendens (Siamese fighting fish): 114849450
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Entry
114849450 CDS
T08231
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114849450 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114849450 (hbs1l)
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
114849450 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
114849450
NCBI-ProteinID:
XP_028996747
UniProt:
A0A6P7LRY5
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Position
24:complement(7534277..7551139)
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AA seq
700 aa
AA seq
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MSRHRNVRGYNYDEDFEDDDMYGQSVEDDYCCISPATANQFIYSRQERQAPKEEPLEEED
YEEEDVPMSPSISHNLDPLDQAKLYSCLDHMRTVLGDAIPESVLNQAAIRCGFDPQKALD
AVLSEDPKTAPVTKNTNVETASMARFSQDKAPLPQRTKQEAVAEKAKGRDASNNTLDPEV
VPKVARMTVSGKKQTMGFNVPSTAENGAVPAPARRGGSPENATVAPATESKRPETPSKGS
NGEESASAPTPGRSGKARQTINIKAELEKRQGGKTLLNLVVIGHVDAGKSTLMGHLLYLL
GNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETSSKVVTLMD
APGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHALLVRSLGVTQLAVA
VNKMDQVNWQQERFQEIISKLGHFLKQAGFKESDVFYIPTSGLSGENLATRSSVAQLTSW
FSGPSLLEQIDSFKAPQRSVDQPFRMCVSDVFKDQGSGFCVTGKIEAGYIQTGDRILAMP
PNETCTVKGITLHDEALDWAAAGDHITLTVTGMDIIKINVGCVFCDPKEPIRACTRFRAR
ILLFNIDVPITQGFPVLLHYQTVSEPATIRKLISVLHKSSGEVLKKKPKCLSKGMNAVVE
IQTQRPVSLELYKDYKELGRFMLRYVGSTIAAGVVTEINK
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcacagaaacgtccgaggttacaactacgacgaagacttcgaagatgatgat
atgtatggacagtctgtggaggatgactactgctgtatatcaccagcaactgcaaatcaa
ttcatatactccagacaggagaggcaagcgccgaaagaagaacctttagaagaggaagac
tatgaagaggaagatgtgcctatgtccccttctatcagccacaaccttgaccctcttgat
caagccaagctgtattcctgtctggaccatatgaggacagtgctgggagatgcaatacca
gagtctgttctgaaccaggctgccataagatgtggatttgacccacagaaagcactggat
gcagtcctgtctgaagaccctaaaacagccccagttactaaaaatactaacgtggagact
gcttcaatggcaagatttagccaggacaaagcaccccttccacagagaactaaacaagag
gccgtggctgagaaagctaaaggtagagacgcctcgaacaacacactggaccctgaggtg
gtgcccaaagtggcgcgcatgacggtctctggcaagaagcagaccatgggcttcaatgtt
cccagcacagcggagaacggtgccgtccctgctccagcacgccgaggcggcagccctgaa
aatgccaccgtcgctcctgccacagagtccaagcgtcccgaaaccccatccaaggggtcc
aacggtgaagaatcagcaagcgctcccaccccaggccgctctggaaaggcccggcagacg
atcaacatcaaggctgagctggagaagaggcaggggggcaaaactctgttaaatttagtg
gttataggtcatgtggatgcaggtaaaagcacactgatgggccacttgctttatctgctg
ggcaatgtcaacaaacgcaccatgcacaagtacgagcaggagtcgaaaaaggccggaaag
gcgtcgttcgcctacgcgtgggttctggatgagacgggagaggagcgagacaggggtgtg
acaatggatgtgggcatgaccaaatttgaaacaagctcaaaagtggtgacgctgatggat
gcgcccggacacaaagacttcatccccaacatgataacgggagccgctcaggccgacgtg
gccgtgctcgtggtggacgccagcaggggagagttcgaggcgggctttgaagcgggtggt
cagaccagagagcacgccctgctggtgcgttcgctgggcgtcacgcagctggccgtggcc
gtcaacaagatggatcaggtaaactggcaacaagaacgtttccaagaaatcatatccaaa
cttggccattttctgaagcaggcgggattcaaggaatcggatgttttttacatccccacc
agcggcctgtcaggggagaacctcgccaccagaagttccgtagcccagctcacctcttgg
ttctctgggcccagcctgctggagcagattgattccttcaaagccccacagaggtctgta
gaccagcctttcagaatgtgtgtctcagatgtcttcaaagaccagggttcaggcttctgt
gttactgggaagattgaggcaggttacatccagaccggtgacaggattctggccatgcct
cccaatgagacctgcaccgtcaaaggaattacgctgcacgacgaggctcttgactgggct
gcagcaggagaccacatcaccctgacggtcactggcatggacattatcaagatcaatgtc
ggctgtgtgttttgtgatccaaaggagcccattcgagcctgtacgcgattcagagcccga
atcctcctcttcaacattgatgttcccattacacagggcttccctgtactgttacattac
cagacagtgagtgagccggccaccattaggaagctgattagtgtgctacacaagagcagc
ggtgaagtcctcaagaagaaaccaaaatgtttaagtaagggtatgaatgccgtagtggag
atccagacccaaaggccggtgtcattagaactgtacaaagactacaaggagctgggccgc
ttcatgctgagatacgttggctccaccattgctgcaggggttgtcaccgagatcaataaa
tga
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