Betta splendens (Siamese fighting fish): 114851020
Help
Entry
114851020 CDS
T08231
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04140
Autophagy - animal
bspl04148
Efferocytosis
bspl05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114851020 (vps16)
04148 Efferocytosis
114851020 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
114851020 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bspl04131
]
114851020 (vps16)
Membrane trafficking [BR:
bspl04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
114851020 (vps16)
Hops complex
114851020 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
114851020
NCBI-ProteinID:
XP_028998348
UniProt:
A0A6P7LWS3
LinkDB
All DBs
Position
2:complement(1363714..1373297)
Genome browser
AA seq
834 aa
AA seq
DB search
MAFITANWNPLGETFYRKTELYDMTWNVRDGLRESLVAAAPYGGPIALLREPHRRSPSSR
PQLEIYSASGTAIASFPWKSGPVIHLGWTVCDELLCIQEDGTVLVYDLFGSFKRHFSMGQ
EVVQSQVLEAKVFHSPYGTGVAIVTGSSRFTLATNIDDLKLRRLPEVPGLQGKPSCWVIL
TQDRQTKVLLSTGPELYILDNTSCTAVCPPGLSPQTCSIVHMCVSFSYRYLALFTDTGHL
WTGFSNLQEKLSEVDTKKTTAPKHMLWCRRPQSQQPSVVLMWDRLLMVVGQCHDTVQFPV
EDPCVLVGEMDGVRIISSASQEMLQEVPLVCQDIFKIASMAPGALLLEAHREYEKSSQKA
DEYLREIKEQSMLREAVRQCVEAAGHEYDPKTQKSLLRAASFGKCFLTDFSPDSFVQTCR
ELRVLNAVRESSVGLPLTHVQFKQMTLQVLIDRLVYRRFYPLAIEICHYLKIPDYQGVSR
VLKHWASCKVQQKDLSDEAIARAVCVKVADSPGVSYSDIAAKAYECGRTELAIKLLDFEP
RSGEQVPLLLKMKRSQLALSKAVESGDTDLVYTVVSYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKLQEQDTLRDLYNQDDDHQELANYYVSASYREKRLDARLSVLQSAVDEYNKSKNE
FAAKATEDEMRLLRFQRKLDDEKGAGLLGLSLQATMEALLALGLYKQAEQLYRDFRVPDK
RYWWLKLKSLAEKEEWDELEKFSKSKKSPIGYLAFVEVCMKYNNKYEAKKYVLKVTPEQK
VKAHLAISDLEGAADAAIERRNDAEIGAVLAKCPTSDQLLMEKLNRARAAITKK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcatttatcacggccaactggaacccgctgggagaaaccttctatcggaagacagag
ctgtatgacatgacgtggaacgtacgtgacggactccgggaaagcttggtggctgcagct
ccgtacggaggacccatagctcttcttcgagaacctcacagacgttctccaagttcccgt
cctcagttggagatttattctgcatcaggaactgctattgccagtttcccttggaagagt
ggtcccgtcatccatctgggttggacagtctgtgatgagttgttgtgcattcaggaagat
ggaacagttctggtctatgacctttttggctccttcaagcgccacttcagtatgggtcag
gaagtagtacagtctcaggtgctggaagccaaggtgttccactctccttatggaacaggt
gttgccatagtgacaggctcctctcgcttcaccttggcaacaaacattgatgacttgaag
ctgcgccggttacctgaagtaccaggtttacaggggaagccatcatgctgggtcatcctg
actcaggaccgtcagactaaagtcctcctatccacggggcctgagctctacatcctggac
aacacttcatgcactgctgtgtgtcctccaggtcttagtcctcagacatgcagcattgtc
cacatgtgtgtgtctttcagctatcggtacctggctctgttcacagacactggacaccta
tggacagggttctccaacctccaggaaaaactaagtgaagtcgacacaaagaagacaaca
gcacccaagcacatgctctggtgtcgcagaccacagagccagcagccttcagtggtttta
atgtgggacaggctgctcatggtggttggccagtgtcacgacacagtccagtttcctgta
gaggatccatgtgttttggtgggagaaatggacggagttcggatcatcagttcagccagt
caggagatgcttcaggaggttcctttggtttgtcaggacatcttcaagatcgcctccatg
gctcctggagcgctgctgctggaggctcatcgggagtatgagaagtcgagtcaaaaggct
gatgaatatctgagagagataaaggagcaaagcatgctgagggaggccgtgcgacagtgt
gtggaggcagccggtcacgagtatgaccccaaaacccagaaatccctgctcagggcagca
tcctttggaaagtgcttcctcacagacttcagcccggactcgttcgttcagacatgcaga
gaactgcgagtcctgaacgctgtcagggagagcagcgtgggtcttccactcacccacgtc
caattcaagcagatgactctgcaggtgctgattgatcggttggtgtatcggaggttttac
cctttggccatagagatctgtcattatctaaagattcctgattatcagggagtgagccga
gtcctcaaacactgggcttcctgcaaggtgcagcaaaaggacttgtcagatgaggccata
gctcgagcagtgtgtgtaaaggtggcagactcacctggagtatcttactctgacatcgca
gccaaggcctatgaatgtggaaggacagaacttgccatcaagctcctagacttcgaacct
cggtctggggagcaggttcctctactgctgaaaatgaagcggagtcagctggcgctgagc
aaggcggtggagagtggagacacggacctggtgtacacagtggtgagttacctcaagaac
gagatgaacaggggagatttcttcatgactctgaggaaccagccagttgctctcagctta
tacagacagttctgtaagctgcaggagcaagacactctgagagatctttataaccaggac
gatgaccaccaggagctggccaactactatgtgtctgccagttaccgagagaagcggttg
gacgcacgcctgtctgtcctgcagagtgccgtcgatgaatacaacaagtccaagaatgag
tttgctgctaaggccacggaggatgagatgcgcctccttcgctttcaaagaaaactggat
gatgagaaaggagcaggacttctgggtctgtctctgcaggcgaccatggaggctctgctg
gcgctgggcctctacaaacaggcagaacaactttacagagattttagagttcctgacaaa
agatattggtggttgaagctgaagtctctggcagaaaaggaggagtgggacgagttagaa
aagttctccaagagcaagaagtctcctattggctacctggcatttgttgaggtttgtatg
aagtacaacaacaagtatgaagctaagaagtatgtgttgaaagtaacgcctgagcagaag
gttaaagctcacctcgccatcagtgacctggagggagcagcagatgctgccattgaacga
cgcaatgatgcagaaatcggggcggtgctcgccaagtgtcccacctccgaccagctgctg
atggagaagttgaaccgagcccgagctgccatcactaagaagtga
DBGET
integrated database retrieval system
