Betta splendens (Siamese fighting fish): 114851202
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Entry
114851202 CDS
T08231
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114851202 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114851202 (zcchc7)
03016 Transfer RNA biogenesis [BR:
bspl03016
]
114851202 (zcchc7)
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
114851202 (zcchc7)
Transfer RNA biogenesis [BR:
bspl03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
114851202 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
AIR2-like_ZnK4
DUF7302
Motif
Other DBs
NCBI-GeneID:
114851202
NCBI-ProteinID:
XP_028999120
UniProt:
A0A6P7LXV5
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Position
1:10408305..10443833
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AA seq
632 aa
AA seq
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MYCSRQELENELYQEDEGDSEGSGANSELEFHLYSQLHYSSNPGEMDELESEEEEVEVRN
SQHLQGTEVTTTEDGKLDNIGESGPLSLNVSKLHEHLKKKTADKDNTQKSGSGTDSEGQR
GHSSLVEEVIVIDSSPDVISISEDDTSEDEGICVSKGQGPRQLKTSTPAQQGTLKRKRAS
PIPVSVPSSGSSSEDSKSQSESESESESESSDSEALQNWMILGRSQQDGDQSISLNLERG
SDSSADSDDVESSWLVSVKDKEAQICNKDRGPRTSVPRVPSRYYTTKTVLCRNCNKAGHL
SKNCPQPKKLSPCFLCGTLGHLSSECPNKHCNNCGQPGHLYNACSEKAYWYKQCHRCGMK
GHFFDACPEIWRQYHVTTKKGLPAAAPTEDSGRSPASCYNCSRKGHFGHACTQRRMFNGV
YPSTPFINHYDTVQDIRRRQNRINLKAERLKKEGYFSSATQNPPTPGPPRKKRKMDHRSN
HSPHQTTTNHKPTHVFFTDSDFKDATPKMNKHNKQKQQESSGKVKPWKPKRPVPTSRDKI
PPNKIIFDESADFPRGGDKRQDLRKKMKNKKNSRAERLCWSVTGEMQGSQSKQNGQKKKK
GAQVQRTAKKKCGGPMYPTDENLFIIKQRRRR
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtactgctcccgtcaagaacttgagaatgagctctaccaagaggatgaaggagactct
gagggctcaggcgccaacagtgagctggagttccacctctatagccagctccactactcc
tccaatcctggggagatggacgagttggagagtgaagaagaagaggtcgaggttcgaaac
agccagcacctgcaggggactgaggtgaccacaacagaggacgggaagttggacaacatt
ggagaaagtgggcctttgtcacttaatgtaagcaaactacacgaacacctgaagaagaaa
actgcagacaaggataatacacagaagagtgggagtgggactgattctgaaggtcaaagg
gggcattcatcactagtggaagaggttattgtaatagactctagtcctgacgtcatctcc
atctctgaggatgacacttcagaggatgaagggatctgcgtgtcaaagggtcaaggccca
cggcagctgaagacttcaaccccagcccagcagggaaccctgaagaggaagagggcatct
cctattccagtgtctgtgccctccagcggctccagctcagaagattcaaaatcccagtct
gagtccgagtctgagtctgagtccgagtcatcggactcggaagctctacagaactggatg
atcttgggccgaagtcagcaggatggtgaccagtccatctcactcaaccttgagagaggc
tctgacagcagcgcagattctgacgacgtagagagcagctggctggtttctgtcaaagac
aaggaggctcagatctgcaataaagacagaggtcccaggacgtcggtgcctcgcgtgccg
agcaggtactacaccaccaagaccgtgctgtgtagaaactgcaacaaggccggacatctc
tccaagaactgcccccagcccaaaaagctatcgccctgcttcctttgtggcaccttgggc
cacctgtccagcgagtgtcccaacaagcactgcaacaactgtggccagcccggtcacctg
tacaacgcctgcagtgagaaggcctactggtacaagcagtgccatcgctgtggcatgaag
ggacacttctttgatgcttgtccggagatctggagacagtaccacgtcacaactaagaag
ggtctccctgcagcggctccaacagaagacagcggccgttctcctgcctcttgctacaac
tgctccaggaaaggacactttggccacgcctgtacacagcgaaggatgtttaacggggtg
tatcccagcaccccattcatcaaccactatgacactgtgcaggacatcagaagaagacag
aacagaataaatctgaaggctgaaagactgaaaaaagaaggttatttctcctccgctact
cagaaccctcccacaccgggcccaccgaggaagaaacggaaaatggaccatcggtccaac
cattcgcctcatcaaaccactaccaaccacaaacccacccatgtgttttttacagacagt
gactttaaggatgcgactcccaaaatgaataaacacaacaagcaaaaacaacaggaaagc
tctggaaaagttaaaccatggaaacctaagagaccagtccctacctctagggacaagatc
ccgccaaataagatcatttttgatgaatcagctgacttccccagaggaggagacaaaaga
caggacttacggaagaagatgaaaaacaagaaaaacagcagggcagagcgtctctgttgg
tctgtaactggggagatgcagggctcacagtcaaaacagaatgggcagaagaaaaagaag
ggggctcaagtccagaggactgctaagaaaaagtgtggtggaccgatgtatccaacagat
gagaacctgttcatcattaagcagagacggcgcagatag
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