Betta splendens (Siamese fighting fish): 114851742
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Entry
114851742 CDS
T08231
Symbol
sox6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bspl03000
]
114851742 (sox6)
Transcription factors [BR:
bspl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114851742 (sox6)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
114851742
NCBI-ProteinID:
XP_028999217
EnsemblRapid:
ENSBSLG00000014744
UniProt:
A0A6P7LY57
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All DBs
Position
3:complement(15894312..16012684)
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AA seq
801 aa
AA seq
DB search
MEGFLRSSFLLSRVMSSKQATSPFASVVDGDDAMSQEHLSWEKEESAEAHGTPQLPLHSL
LHGKAHPDEMQPLSSVPPESDWDSLVSAQQHMESDSNKVCSLYSFRNNSTSPHKPEEGAR
ERSDLLSGSAFGTPERRKGSLADVVDTLKQKKLEEMTKTEQDESSCMEKLLSKDWKEKME
RLNTSDLLAEVKGTPESLAEKEHQLSTMITQLISLREQLLAAHDEQKKLAASQMEKQRQQ
MELARQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGHMPPLMIPIFPHDQRTLAAAAAA
QQGFLFPPGMSYKPGDNYPVQFIPSTMAAAAASGLSPLQLQQLYAAQLASMQVSPGAKMP
PLPQPLNASGPISPSSLKNDKSSSSPIAQVKEEGTQPLNLSARPKTTELVKPPTSPTQSL
FPGSKSSPNSLAGKGGIPSPLGGGLARGSSLDILSSLNSTALFGDQDTVMKAIQEARKMR
EQIQREQLQHHQQGMEAKLSALSAVGLNNCRVDKERAHFESIGHHLGKLGEEGKMGHRVI
DLTRQEDLDGSREVNGSADKPQPYYCWPTGGAGSAEARVFRESRGRNNNEPHIKRPMNAF
MVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQDKQPYYEEQARLSKLHLEKYPNY
KYKPRPKRTCIIDGKKLRIGEYKQMMRSRRQEMRQFFTVGQPPQIPITTSASMVYPGAIS
MATTTPSPQMTSECSSASASPEPSIPVIQSTYNMKLEPNAMANNSEPVNGEDEMDMYEDF
EDEPKSDYSSENDTQEPVSAN
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggagggctttcttcgtagcagctttttactgagcagagtcatgtcttccaagcaagcc
acgtctcctttcgcctctgtggtcgacggggatgatgccatgagtcaggagcacttgtct
tgggagaaagaggagagcgccgaggcccacggaacgccacagctgcccctgcacagcctg
ctccacggaaaagcccatcccgacgaaatgcagccgctcagcagcgtgccgccagagagc
gactgggacagcctggtgtctgcccagcagcacatggaatctgacagcaataaagtatgt
tccctgtactccttccggaacaattccacttccccacacaagccggaggagggggcccgg
gagcggagtgacctgctgagcggatcagcgtttggcactccggaacgtcgcaaaggaagc
ctggcagacgtagtggacacgctgaagcagaagaagctggaggagatgacaaagacagag
caagacgaatcctcatgtatggagaaacttctttcaaaagactggaaagagaagatggag
cggcttaacaccagcgaccttctggcagaagtgaaaggtactcctgagagcctggcagaa
aaggaacaccagctctctacgatgatcacgcagctgatcagcctgcgagagcagctcctg
gctgctcacgatgaacagaagaagctcgcggcttcacaaatggagaaacagaggcagcaa
atggagttagctcgtcagcagcaggagcagattgcgagacaacagcagcagctcctgcag
cagcagcacaaaatcaacctcctccagcagcagatccagcaggtccagggtcacatgcct
ccgctcatgatccccatttttccacacgaccagcgcactctggcagctgcggccgcagcc
cagcaaggcttcctcttccctccaggaatgtcgtataagccaggtgataactacccggtg
cagttcattccatccacaatggcagctgcagcagcgtcaggactcagccccctccagctt
cagcaactgtatgctgcccagcttgccagcatgcaggtctctcctggagccaagatgccc
ccactcccccagccccttaatgccagtgggcccatttctccctcctcgctgaagaatgac
aagagttcctccagccccatcgctcaagtcaaggaggaaggaacacagccgctcaacctg
tctgctcgaccaaaaacgacagaactggtcaaaccccccacatccccgacgcaaagcctg
ttccccggcagtaagagcagccctaacagcctggctggcaagggtggtatccccagccca
cttggaggaggcctagcccggggctcatctctggatatcctgtccagcctaaactctact
gcgctgttcggggatcaggacacagtgatgaaggccattcaagaggctcggaaaatgagg
gagcagatccagagggaacagctgcaacatcaccagcagggcatggaggcaaagctgtct
gccctcagcgctgtgggccttaacaactgcagagtggacaaggagagggcgcactttgag
agcattggccaccaccttgggaagctgggtgaggaagggaagatgggccacagagttatt
gacctcaccagacaagaggatcttgatgggtccagggaagtcaatggctctgcagataaa
ccccaaccatattattgttggccaacaggaggcgctggatccgctgaagccagagttttc
agagagtccagaggaaggaacaataatgagccccacattaaaagaccaatgaatgcattc
atggtgtgggccaaagatgagcggcgcaagattctacaggctttccccgacatgcacaac
tccaacataagcaagattttgggttctcgatggaagtctatgtctaaccaggacaagcaa
ccctactacgaggagcaggctcgtctgagtaagctccacctagagaagtacccaaactac
aagtacaagccacggcctaagaggacctgcattatcgatggaaaaaagctccgcattggg
gaatacaagcagatgatgcgttcacggcgacaagagatgaggcaattcttcactgtggga
cagccaccacagatccccatcaccaccagcgccagtatggtctatcctggggccatctcc
atggccaccaccacaccctcacctcagatgacatcagagtgctcgagtgcctcagcgagt
cctgagccatccattcctgtcatccagagcacctataacatgaagctagagcccaacgcc
atggcgaacaacagtgaaccagtcaatggcgaggatgagatggacatgtacgaagatttc
gaggatgagcctaaatcagactatagtagtgaaaatgacacacaagagccagtcagcgcc
aactga
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