Betta splendens (Siamese fighting fish): 114852034
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Entry
114852034 CDS
T08231
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4-like
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
114852034
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bspl04990
]
114852034
Domain-containing proteins not elsewhere classified [BR:
bspl04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
114852034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
TSP1_CCN
ADAMTS_CR_3
TSP1_spondin
PLAC
Motif
Other DBs
NCBI-GeneID:
114852034
NCBI-ProteinID:
XP_028999890
UniProt:
A0A6P7LYM4
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All DBs
Position
3:complement(5973505..5997033)
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AA seq
944 aa
AA seq
DB search
MRRVCAWIVRAHVLLLLWSDLLTCQHTTDHRKVPRRAEEFRAAHEEVRGSWGAWGAWSDC
SRTCGGGVQEQSRPCLPAHAPPQRRRPGHVISALRPTPPLHRPANSSRGGVQREARPGAP
RRVTHILPGRYGYGKGPYVVPLQTDTGRGSGIAHSHRQRRSAAADGRRPSARGHSVHGLN
KKNNHHHHLRSGASVQARPRQPNTNHLWAPLYQPAAAEQAEVQRSGSQQHQERPYSPLPA
SFCTGERAHYRICNSNACPSSSRHIRAVQCSSYNNQPFMGRLYEWEPFNEVPGAQHCELN
CRAVGFRFYVRLSEKVIDGTPCGSNDSSVCVAGMCLSPGCDEYLGSSEAMDQCGVCGGDN
STCRLVSGVFTHSLSKVGYHKIVEIPEGATMINVTEMVKSQSYLALRSRSGRSIINGNWA
IDRPGKYEGGGTMFTYRRPNEIRSTAGESLLADGPTNEILDVYMIFQQTNPGVHYEYILP
TGKPVGPQQPNHRPEENTVNGEDGYEHHGNTHQETFNTPGGGRFSPPVPENQVPIAQPPR
RERDYNWKLAGATDCSASCGKGFRFSVFHCVHRLSRVQVSEALCDGGSRPSPVEEACNLQ
PCPTFWDIGEWSECSKTCGLGLQHRQVLCRQVYANRTLNVHVSRCRHLERPETAGTCQLK
ICSEWQIRSEWTACSVPCGLGQRSREVRCVSNVGDFVPDEECNMNLRPVDVENCDMGACA
KSWFYTEWGNRCSAECGMGVRTRGVLCLVSHVSSLPLEGCGSERPADSLVCNNGPCDKRL
EWFTGPWSQCSAECGAGSQQRPVVCLMRSDEGFAVVPPYECSSLERPLGQQSCRLKACGA
KWYHTDWSACSKTCEGGFRVREVRCLSDDMLPSEACDERTRPAEKEPCRPEPCAPHVDES
CRDKYFNCNVVVQARLCVYDYYKTSCCASCSRAAHRHPTRRGRS
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagagtttgcgcctggatcgtcagggcccatgtgctgctgctgctgtggtcagac
ctgctgacttgccaacacacaacagaccacaggaaggttcctcggagggcagaggagttc
agggcagcgcacgaggaggtgcggggctcctggggggcctggggggcctggtcggactgc
tcccggacctgtggcggaggggtgcaggagcagagcaggccctgtctgccggcgcacgcg
ccgccccagcgccggcggccgggtcacgtcatctcagccctgcggccgacgcctcccctg
caccggcccgccaacagcagccgcggcggagtccagagggaggcccggcccggtgcacca
aggagagttactcacatcctccccgggcggtacggctacgggaaaggcccgtacgtggtt
ccgctgcagacggacacggggcgaggctccgggatcgctcacagccacagacagaggcgc
tctgccgccgctgacggccgccgtccctccgccagaggccacagcgtccacggcctgaac
aagaagaacaaccaccaccaccacctccgcagcggcgcctccgtgcaggccaggccacgg
cagcccaacaccaaccacctctgggcacctctgtaccagcccgctgcagccgagcaggct
gaggtccagcggtccggcagccagcagcaccaggagagaccgtacagcccgttacccgct
tccttctgcacaggggagcgcgcacactatcggatctgcaacagtaacgcctgtccttca
tccagcagacacatcagggctgttcagtgttcctcatacaacaaccaacctttcatgggc
agactgtatgaatgggaacctttcaatgaagttcctggagcccagcactgtgaactcaac
tgccgggccgtggggttcaggttctacgtacggctgtcagagaaggtgatagatggaacg
ccatgtggatcgaatgattcctctgtctgtgtggcaggaatgtgcctgagtccaggctgc
gatgagtatctgggctcaagcgaggcaatggaccagtgcggcgtgtgtgggggagacaac
tccacctgcagactggtctccggagtcttcacgcacagtctgtccaaggtgggctatcac
aagatagtggagatcccggaaggagccaccatgatcaacgtgacagagatggtcaagagt
cagagctacctagctctccggagccgatccggacgatccatcattaatggaaactgggct
attgaccgaccagggaagtacgagggggggggcaccatgttcacctaccgtcgccccaac
gaaattagaagcacagctggggagtccttactcgccgacgggccgactaatgagatcctg
gatgtttatatgatcttccagcagacaaaccctggtgttcattacgaatacattctcccg
acggggaaaccggttgggcctcagcaaccaaaccacagaccagaggagaacactgtgaat
ggcgaggatggatacgagcatcacggcaacacccaccaggaaacgttcaacaccccaggt
ggggggaggttctctccccctgtccctgaaaaccaggtgcccatcgcacagcctcccagg
cgtgagagagactacaactggaaactggctggcgccacagattgcagtgcctcgtgtggt
aaaggattcaggttctccgtctttcactgcgtccaccgtctgagccgcgtccaggtgtcg
gaggctctgtgcgacggcggcagccggccgagtcccgtggaagaggcctgcaacctgcag
ccgtgccccacattctgggacatcggagagtggtcagagtgcagcaagacgtgcgggctg
ggcctgcagcatcggcaggtcctgtgtcgccaggtttacgccaaccgcaccctcaacgtc
cacgtgagccgctgccgacacctggagcggcccgagacggccggcacgtgccagctgaag
atctgcagcgagtggcagatccgctccgagtggacggcctgctcggtgccatgcgggctg
ggtcagaggtcgcgggaggtgcgctgtgtcagcaacgtgggcgactttgttcccgacgag
gagtgcaacatgaacctgcgacccgtggacgtggagaactgcgacatgggagcctgcgcc
aagagctggttctacaccgagtggggcaacagatgttctgctgagtgcggcatgggcgtc
cggacccgcggcgtcctctgcctggtcagccacgtcagcagcctgcccctggagggctgc
ggcagcgagcggcccgccgactccctggtctgcaacaatggcccctgcgacaagcgcctg
gagtggttcacggggccctggagccagtgctccgcagagtgcggcgccggcagccagcag
aggcccgtggtgtgtctgatgaggtcggacgagggcttcgccgtggtgccgccgtacgag
tgctcgtccctggagcggcccctcggccagcagagctgcaggctcaaggcctgtggggcc
aagtggtaccacacggactggagcgcttgctcgaagacgtgtgagggcggcttccgtgtg
cgcgaggtgcgctgcctgtccgacgacatgctccccagcgaggcctgcgacgagcggacg
agaccggcggagaaggagccctgtcgccccgagccctgcgcgccccacgtcgatgagagc
tgcagagacaagtacttcaactgcaacgtggtggtccaggcccgtctctgcgtctacgac
tactacaagaccagctgctgcgcctcgtgctcgcgggccgcccacagacacccgacccgc
cgcggccgcagctag
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