Betta splendens (Siamese fighting fish): 114852440
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Entry
114852440 CDS
T08231
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3 isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114852440 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114852440 (cstf3)
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
114852440 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_6
TPR_19
Motif
Other DBs
NCBI-GeneID:
114852440
NCBI-ProteinID:
XP_029000654
UniProt:
A0A6P7M3K2
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Position
3:complement(12997622..13007010)
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AA seq
716 aa
AA seq
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MATEGAADQAAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVT
QFPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQ
YLEQSSKLLAEKGDMNNSKLFSDEAANIYERAIGTLLKKNMLLYFAFADYEESRMKYEKV
HSIYNKLLAIEDIDPTLVYIQYMKFARRAEGIKSGRSIFKKAREDLRTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPE
KSGEIWARFLAFESNIGDLASILKVERRRFSAFKDEYEGKETALLVDRYKFMDLYPCSTS
ELKALGYKDVSRAKLAALLPETVVAPSAPALKDDADRKPEYPKPDTNQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPTCFTGPFVQVDELMETFRRCILPETVDAAIELIT
GRQPDAGGEGNGPMENHAIAKSLKRPNADSDEEDDKGAVAPPIHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgagggagccgccgaccaggcagcggcagaatatattccagagaaggtgaag
aaggcagagaagaagttggaagaaaacccatatgaccttgacgcatggagcattctgatt
cgagaagcacagaatcaacctatagataaagccaggaagacatatgagcgacttgtcaca
cagttcccaagttctggcagattctggaaactattcattgaagctgagatcaaggctaaa
aactatgacaaggtagaaaagttgtttcagcggtgcctaatgaaagtgttgcacattgac
ctgtggaaatgctacctctcgtatgtcagagagaccaaagggaagctgccaagctacaaa
gagaagatggcccaggcctacgactttgcccttgataaaattggcatggaaataatgtct
tatcagatttgggtagactatatcaacttccttaaaggagttgaagccgtgggctcatac
gcagagaaccaacgaatcactgcggttcggagggtgtaccagcgaggatgcgtgaaccct
atgatcaacatcgagcaactttggagagactatagcaaatatgaggagggcattaatgtg
cacttggctaaaaagatgattgaggatcgaagcagagactacatgaatgccagaagagtg
gcaaaggagtatgagactgtgatgaaggggctggacaggaacgcaccctcggtaccgccc
cagaactcacctcaggaagcccagcaagtggaaatgtggaagaagtacatccagtgggaa
aaaagcaacccgttacgcacagaagaccagactctcatcacaaaaagagtaatgttcgcc
tacgagcagtgcctactggtgctgggccaccatccagacatatggtacgaggcagcacag
tacctggagcagtccagcaaactgctagcagagaaaggggatatgaataattccaagctt
ttcagtgatgaggcagctaacatctatgaacgtgccatcgggactcttctgaagaagaac
atgctcctgtactttgcctttgccgattacgaagaaagtcgtatgaagtatgagaaggtg
cacagcatctacaacaaactgctggccatcgaagacatcgaccccacgcttgtttacatc
cagtacatgaagtttgccaggagggcggagggcatcaagtcaggtcgctccatcttcaag
aaggccagagaggatctacgcacgcgtcaccacgtgtacgtcaccgcagcgctgatggaa
tactactgcagcaaggataaatcagtggccttcaagatctttgagctcggtttgaaaaaa
tatggcgacattccagagtacatactggcttatattgattacctgtcgcaccttaatgag
gataacaacactagggtcctgtttgagcgtgtcctcacctcaggaagcttgtcaccagaa
aagtcaggtgagatctgggctcgatttctggcctttgagagcaacataggagacctggcc
agcattttgaaagtagagcgccggcgtttctccgcgttcaaggatgagtatgagggcaaa
gaaacggctctgctcgtagacaggtacaagttcatggacctgtacccctgctccaccagt
gaactcaaagcccttggatacaaggatgtgtctcgtgccaaactggcagcgctgcttcca
gagaccgtggtggctccctctgcgcctgcactgaaggacgacgctgaccgcaaacccgag
tatcccaaacctgacaccaatcagatgattcccttccagccacgccaccttgcccctcca
ggtttacaccccgtccctggtggagtgttcccagtccccccagctgctgtggtcttaatg
aagctgctccctccacctacatgcttcactggtccgtttgttcaagtggatgagctcatg
gaaacattcaggagatgcatacttcctgagactgttgatgctgctatagagctgatcact
ggcaggcagcctgatgctggaggcgagggcaacggacccatggagaaccacgcaattgcc
aagtcgctcaagaggccaaacgcagactccgacgaggaggacgacaaaggagccgtggct
ccgcccatacacgacatctaccgcgcgcgccagcagaagaggattcgataa
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