Betta splendens (Siamese fighting fish): 114852500
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Entry
114852500 CDS
T08231
Symbol
neo1a
Name
(RefSeq) neogenin 1a isoform X1
KO
K06766
neogenin
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04350
TGF-beta signaling pathway
bspl04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
114852500 (neo1a)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
114852500 (neo1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bspl04515
]
114852500 (neo1a)
Cell adhesion molecules [BR:
bspl04515
]
Immunoglobulin superfamily
DCC/UNC5 family
114852500 (neo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
Ig_3
I-set
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
NDNF
fn3_2
Tissue_fac
fn3_SORL1
C2-set_2
Sp38
V-set_CD47
Fn3_Dep-1_3rd
EphA2_TM
TMEM154
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
114852500
NCBI-ProteinID:
XP_029000769
UniProt:
A0A6P7M3W8
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All DBs
Position
3:complement(2023182..2124584)
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AA seq
1509 aa
AA seq
DB search
MAERGALSLLSLLCLTLLYAETTAKHVDKGSAAQPFSPFWFTVEPQDTLAVRGNSALLNC
SAHSGDAAPARIEWKKDGTFMSLVSDERRRVLPDGSLFFTHVVHSKHNKPDEGTYQCVAT
IDNLGSISSRTARLSVAGMPRFTSQPAPTTVHLGDSQVMACEINSDLVAFTRWERDRQPL
ELSSRVFQLPSGALVLSNASEADAGLYRCLVENVGSSKSSDEAQLQTVPETGEERKLEFL
VQPVSVTKASGTNVLLPCVVTGHPAPHVRWMFGDKLLEESDGRVQILGGGSLQLFNLTEQ
DAGTYTCMADGPNATIEAQAQLTVQVPPQFVKRPANIYAHESMDIVFECEVSGSPAPTVK
WVKNGDAVIPSDYFKIIKEHNLQVLGLVKSDEGFYQCLAENDAGNIQSNAQLIILDHDVA
LLSPPPPSLTPNTTDHVTPGSGGVAGPTGPTPSAPRDVVASLVSTRFIKVTWRQPAEPHG
DDLTYSVFYSQEGTSRERVVNTSRPGEMQVTVQNLMPDTKYRFRVVAHNSNGPGESSAAL
KVATQAEVQVPGPAPNLQALSNTPTSVSLTWDKPLTGNGEILTYKLYYTDKSVGNEQDVD
IDAQSYTLTGLKKNTEYSFRVVANNKHGPGVSTEDVAVRTLSDVPSAPPQNLTLEVQNSK
SILLRWQPPPLNGQNGEITGYKIRYRKGSRRSEAAETTGGTQLNKLIDALERGTEYSFRV
SATTVNGTGPATEWVTAETFESDLDESRVPDQPSSLHVRPLVNSIVVSWTPPENQDIVVR
GYSIGYGIGSPHAQTIKVDHKQRYYTIESLDPSSHYVITLKAFNNVGEGIPVYESAVTRP
QSDPIDPDVDLYELFHPPYTPVPDPTPMMPPVGVQASVLSHDTIKVTWADNSLPKNQKIT
DNRYYTVRWKTNIPANTKVKMANTTSLSHLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAQ
GTTFETIPSSSPKDVTVVSKENKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWV
IEPVVGNRLTHQIQELTLDTSYYFKIQARNSKGMGPMSDAVHFRTPKTESSDKMANDQAS
NLLPKAGPSGNNHPPDSGTSVGKSGVGSNSENHILVIVIIISVGAFTIIVVVVGAFLCTR
RTTSHQKKKRAASKSSNGSHKYKGNSKDLKPPDLWIHHERLELKPMDKSPEPNPVMTETP
IPRTSQDITPADSGLESNPHLQQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDAQPPQ
PVISAHPIHSLDNHHHHYHMGSLASPTRSYLYHPGSGHLRPHACTSPISHLDRVDSTESV
RNTPSSEPLPPAAASSQASCPSEIMADLEGSYHGSTTTEEEPSYSSNLPPHRSAHPHAHA
HPLKSFAVPAIPTGSHPSYESPALPSTPLLAQTGPPTHPHVVKTASIGTLGRTRTPMVVT
VPNAPEVPETSKMLEDVDSVLASLPPCPSPAPRSNPVPLPQSYEPDELTEEMAHLEGLMK
DLNAITTAP
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcggggagcgctgtcgctcctctctctcctctgtctcacccttctctacgcg
gagaccaccgcaaagcacgtcgacaaaggttcagcggcgcagcccttcagccccttctgg
ttcacggtggagccccaggacacgctggccgtccggggcaactcggcgctgctcaactgc
tccgcccacagcggcgacgccgcgccggcgcgcatcgagtggaagaaggacggcaccttc
atgagcctggtgtcggacgagcggcggcgcgtgctccccgacggctcgctcttcttcact
cacgtggtccattccaagcacaacaagcccgacgagggcacctaccagtgcgtagccact
atcgacaacctgggctccatttccagccgcacggctcgtctctctgtagcaggaatgccc
aggttcaccagccagccagcaccaaccactgtgcatctaggggatagtcaagtgatggca
tgtgagatcaactccgacctagtggccttcacccggtgggagcgggaccggcagccgctg
gagctcagcagcagggtgttccagctgcccagcggcgccctggtgctcagcaacgcctct
gaagccgacgctggcctctatcgctgtctggtggaaaatgtgggttcatccaagtccagc
gacgaagcccagctccagacagtgccagaaaccggagaagaaaggaagctggagtttctg
gtgcagcccgtctctgtgaccaaggcgtccggcaccaacgtgctgctgccctgcgtggtc
accggtcacccggcgccacacgtccgctggatgtttggagacaagctgcttgaggaaagc
gatggccgcgtgcagatcctgggaggaggcagcctccagctctttaatctcacagagcag
gatgctggcacatacacctgcatggcagacggtccaaatgccaccatcgaagcccaggcc
cagctcacagtacaagtccccccacaatttgtcaagcggccggccaacatctatgcccat
gagtccatggatatcgtcttcgagtgtgaggtttcagggtcaccagccccgactgttaaa
tgggtcaagaatggagacgctgttatccccagtgactacttcaaaataattaaggagcac
aacctgcaggtcctgggtctggtcaagtcagacgagggtttctaccagtgccttgcggaa
aacgatgccggcaacatccagtcgaatgcgcagctcatcatcctggatcacgacgtagcc
ctgctctctcccccgcccccctcactgactcctaacactactgaccatgtaacgccaggc
tccggtggtgtagccggtccaacaggacccaccccctccgccccccgggacgtagtggct
tcgctggtttccacccgcttcatcaaggtgacgtggcgccaaccggccgaaccgcacggg
gacgacttaacctactctgttttctacagccaggagggaaccagcagggagcgagttgtg
aacacgagtcgtccgggggagatgcaagtcaccgttcagaacctgatgccagataccaaa
tatcgcttcagggtcgtagcccacaacagcaacgggccgggcgagagctctgctgcgctc
aaagtggccacccaggcagaagtccaggtgcccggccctgctcccaacctgcaggcgctg
tccaacacgcccacctccgtctccctgacctgggacaagccgctcaccggcaacggagag
atcctcacctacaaactgtactacacagacaagagcgttggcaacgagcaggatgtcgac
atcgatgctcagtcctacacgctgaccgggctgaagaagaacacggagtacagcttccgt
gtggtggccaacaacaagcacggcccgggcgtctccaccgaggacgtggccgtgcgcacc
ctgtctgacgtacccagcgctcctcctcagaacctcactctggaggtccagaactccaag
agcatactgcttcggtggcagcctcctccgcttaatgggcagaatggagagatcacgggt
tacaagatccgataccgcaaagggtcccggaggagcgaggcggctgagaccaccggaggc
acccagcttaacaagctcattgatgctctggagcgaggaaccgagtactccttcagggtt
tcagccacgacggtgaacggcaccggaccggccactgagtgggtcacggcagaaacattc
gagagtgacctggatgaatcgcgggttccagaccaacccagctcgctccacgtccgcccg
ctggtcaacagcatcgtggtgagctggacgccgccagagaaccaggacattgtggtgcgt
gggtacagcatcggctacggcatcggcagtcctcacgctcagaccatcaaagtggaccac
aagcagcgctactacaccatcgagagcctcgatcccagctcccactacgtgattactctg
aaagccttcaataacgtgggcgaggggattcctgtgtatgaaagtgccgtcaccagaccc
cagtcagaccccatagaccccgatgttgacctgtacgaactcttccatcctccatacacc
ccagttccagaccccacccccatgatgccgcccgtgggcgttcaggcctctgtgctgagc
cacgacaccatcaaggtgacctgggccgacaactcgctccccaagaaccaaaagatcaca
gacaaccgctactacacggtgcgatggaagaccaacatcccagccaacacgaaggtcaag
atggccaacaccaccagcctgagtcacttggtcacaggcctgaagcccaacacgctgtac
gagttctccgtcatggtgaccaaaggccgccgcagcagcacctggagcatgacggcacag
ggcaccacgtttgagacgattcccagctcttctccaaaggacgtgactgtggtgagcaag
gagaacaaacctcgcaccatcattgtcaactggcagcctccgtctgaggccaacggaaag
atcactggctacatcatctactacagcacagacgtgaacgctgagatccacgactgggtc
atcgagccggtggtggggaaccgtctgactcaccagatccaggagctgacgctggacacc
tcctactacttcaagatccaggcccggaactccaaaggcatgggccccatgtctgacgcc
gtgcatttccgcactccaaaaactgaatcctctgacaaaatggctaatgaccaagcttca
aatcttctgccaaaagcaggaccttcaggcaacaatcacccaccggactctgggacttcc
gttggtaaatcaggggttggaagcaacagtgagaatcacatcctggtgattgtcatcatc
atttcggtgggagccttcaccatcatcgtggtggtggtgggggctttcctgtgcacacgc
cgcacgacgtcccaccagaagaagaagcgggccgcctcgaagtcctccaacggctcccac
aaatacaaagggaactccaaagacctgaagcctcccgatctttggattcaccacgagaga
ctggaactcaaacccatggataagtccccagagcccaacccggtcatgacagaaacaccc
attccccgcacatcacaggacatcacgccggctgacagcggcctggagagcaatccccat
ctgcagcagaggcgcaactcctaccgtggccatgagtcagaggacagcatgtctacacta
gcaggccgacgggggatgaggcctaaaatgatgatgccttttgacgcgcagccgcctcag
cctgtgattagtgctcaccccatccattcccttgataatcaccaccaccattatcacatg
ggcagcctggcgtcaccaacacgcagctatctgtaccacccgggcagcggtcacctgcgc
ccgcatgcctgcacctcccctatctcacaccttgacagggtggactctacagagtcggtg
aggaacacccccagttcagagcctctccctccggccgccgcctcctctcaggcctcctgc
ccctcggagatcatggccgaccttgagggcagctaccacggctccaccaccaccgaggag
gagcccagctactccagcaacctgcccccgcaccgctcggcccacccgcacgcccacgcc
cacccgctcaaaagcttcgccgtgcccgccatccccaccggcagccatccgtcgtacgag
tcgccggccctgcccagcaccccgctgctcgctcagaccggaccccccactcaccctcat
gttgttaaaacagcctccattgggacactgggaaggacacggacgcccatggtggtcact
gtgcccaacgcccccgaggtgccagagaccagtaaaatgctggaagatgtggacagcgtg
cttgcctccctcccaccctgcccctcccctgcccctcgcagtaaccctgttcctctccct
cagagctacgagcccgacgagctgaccgaggagatggcccacctggagggcctgatgaag
gacctgaacgccatcaccacagcgccatga
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