Betta splendens (Siamese fighting fish): 114853051
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Entry
114853051 CDS
T08231
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bspl04990
]
114853051
Domain-containing proteins not elsewhere classified [BR:
bspl04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
114853051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
HTH_upst_double_PIN
Motif
Other DBs
NCBI-GeneID:
114853051
NCBI-ProteinID:
XP_055363138
UniProt:
A0A9W2XMJ8
LinkDB
All DBs
Position
1:5089094..5108010
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AA seq
1767 aa
AA seq
DB search
MASPAAGRHAPNASPREEPEPVEPNHPEPACQEAQKWIEAVTGKSFGDKDFRSALENGIL
LCELLSAIKPGLVKKINRLPTPIAGLDNLSVFLRGCEELGLRGSQLFDPGDLQDTSIRAN
LKDSDCNRKLKNVLNTVFWLGKAAGGCASYSGPNLNLKEFEGLLAQMKLETEDVGESPQN
RSVRDSGYDCWDSERSESLSPPRHTRDNSLDSLDSFGSRSQHSPSPDVVNRVNSEGRVSD
SEADAHSRKPDVRKDDMLARRTASSESKSSIPFNQFLPNRANASSYVPIGRRKPQADEGE
QRSLSEQSRKTALQHKSLKTVTWAPPNCGETPKQEEEKVSQEVLERSRLQKLEKAGIKVL
PAAVRYSSPSTPTAEEQEVRPPSPNIILRRDNDFLSSQKSAWDSSSEEEAEAQKVPDVRR
DDLASRRAQRGPVAPRVHQFVPPPVCSTKDQERWEGIRRASQQTLQEKESSEREAVPDII
TRRDNPFLKPSPRQEEDEGEEDEGQLRPVPNKQKDDLAHRRAQSRPIAHRDGATRFVSAS
MSHADMQKWGRLRMTEPSEASPASVCQACLQKTYGGASSRSAKAGRDHGKVVTFGGVTEI
ERPVDAVMSSEGEETELLRRLLSKAAVAVPVVGLGSRLSQRERSQVDGADPCHPAIPPAP
RTPWTPSTPAELDAGLAQYEQRTEEEDDEEEERIPDLRKDDMMARRTGAFNKQNVTVSYN
RFLPLPGLKRCTQGEDMADAAPKSKREAQADGSKKLTVRSVCPKAEAAQPHPDAAVIRSA
PHSERERDEDDGACGENEPVPDLEKDDMMARRTGAFQAPVVARANQSFNQFLPMPGSVKY
NISPVSAMKQIHRSPKSTGNVASGSSTVTVAAEPQSPSSKAPNSSRCEGQTGERAVVGGK
QEGDVKIPKEPVTVAEPPSPSPLPPSLSPAVPVCKVEADLERQRSEDKVEECVEERKRDV
NEQAAKKPFWLLEDELPPMMMSRRVTFMSEDTESVSLGDMLNEEEVGHMPQLSQSRYERM
HEQYNSFLEDEDHWQNDLARWKNRRRSTSQELIRKEEERKRIEKRMKGPDGKRKSIKTYK
EIVEEKERREEELCEAYRNAATPEEAAMVLQRYALRFTISDAILDSLKLPRATSTPRPDL
NQSNEEHKPSSPMTDSETSDPQHKSEPAATLEERQVKAGDAEAPGSPAPDSLLSTVTKSD
NKPPQTLELNEVQAKHTSRPPAELISGGAPTETNHAPPQRRPVQPHTTQPVQTLPSPSPP
CVPPRPVPLLAAKPYCQPKNAQPGHKPVKMDGLVRVNGEPADTSTPASSQHLPQEIKDIA
PKHSEKDLTPKQMEKDVTQKQTQNNVPPGETEIKTETSHQPSAPPTEKPSSSSGSAISSL
IGGRNCVITTTIVTELTQTLVEPFHPDIQNNEQVNGTTASFGQPAEEKVAQPATDSSEQE
HPPTVMEGLEESSVSIETPMLNLAKRVNHWVWDPNEERKRLERWQQEQERLLQVPRWNSV
HVHGSVNRRHKLHWLRVICGSAVISLYTVSLQEQYQKEQEKLKKEWEKAQLEVEEEERKH
NEEERRILEETVTPLSPTGLLIQPPGQAEMNSAAPENISAEKRNLPPQQSSQRISMGSED
QHASKLHFFQDSARDSEPSKKQELWKTSSLDRNSQLNQAQAVKRSGSYDVVSDKQQSSSS
LPQPPSPSRCVSGKRLCSGCSQPLGKGAAMIIDTLGLFFHVHCFKCGVCDGQLGDATAGT
DVRIRNGLLSCHECYIASRGRGQPTTL
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcccgccgcaggtcgccacgcgccgaacgcttcaccgcgggaagagccggag
cccgtggagccgaaccatcccgaacctgcctgtcaggaggcacagaaatggatagaggct
gtgacggggaagagctttggagacaaagacttccgcagtgcactggagaacggcatcctg
ttgtgcgagctactgagtgcaatcaaacccgggctggtgaagaagatcaacaggctgccc
actcccattgcagggctggacaacctgtctgtcttcctgaggggctgtgaggagttgggc
ctcaggggctcccagctatttgaccccggggacctgcaggacacctccatacgagctaac
ctaaaggactctgactgcaaccgcaaactaaaaaatgtgctcaacacggtgttctggctg
gggaaggccgccggcggctgcgcctcctacagtgggcctaatctcaacctcaaggagttt
gaagggctgcttgctcaaatgaagctggagactgaggacgtaggagagagtccacagaac
cgcagcgtcagagacagtggctatgactgctgggactctgagaggagtgagtccctctct
ccaccgcgacacacgcgagacaactctctagacagcctcgactcctttggctcccgatca
cagcacagcccgtctcccgatgtggtcaatcgagtcaacagtgaaggacgagtaagcgac
tcagaggccgacgcccacagcaggaagccagacgtgcgcaaggacgacatgctggccagg
cggacagctagcagcgagtcaaagagctccatcccatttaaccagtttcttcccaaccga
gccaacgccagctcctacgtccccatagggcgccgaaaaccgcaagctgatgagggagag
cagcggagtctctcggagcagagcagaaaaactgcactgcagcataaatctctcaagacc
gtcacttgggcgcctccgaactgtggagaaaccccaaagcaggaggaggagaaggtttcc
caggaagtgttggagcggagtaggctccagaagctggagaaggccgggattaaagtcctg
cctgctgcggttcgctacagcagccccagcactcccaccgcggaggaacaggaagtgagg
ccgccgtccccaaacatcatccttcgccgtgacaacgactttctgagctcccagaagtcc
gcgtgggattcctcatccgaggaggaggcggaggcgcagaaggtgccggacgttcgcagg
gacgacctggcgtccagacgagctcagcgtggccccgttgctcccagggtgcaccagttc
gtccctccgcccgtatgtagcacgaaagatcaggagcgctgggagggcatcaggcgagcc
tcacagcagacgctgcaggagaaggagagcagcgagagggaggcggtccccgacatcatt
acacgcagagacaaccccttcctgaagcctagtcctcgtcaggaggaggacgagggcgag
gaggacgagggacagcttaggccggtgcctaacaagcagaaagatgacttggctcatagg
cgagctcagagtaggcccatcgctcacagggacggggccacgcgcttcgtttctgcctca
atgagccacgcagacatgcagaagtgggggagactcaggatgacggaacccagtgaggcc
agtccagcctctgtgtgccaggcttgtctgcagaaaacctacggcggtgcctcaagcagg
tcagcaaaagctggacgggatcacggcaaggttgtgacctttgggggcgtgactgagatc
gagcggccggtagacgctgtcatgtcaagtgagggggaggagacggagttgctccggcga
ctcctttccaaggccgctgtagccgtgcccgtcgtcggcctgggctcccggctctcgcag
cgggaacgcagccaggtagacggagccgacccctgtcaccctgcaattcccccggctccc
cgcacaccctggaccccctccacccccgctgagctagacgcaggcctggctcagtacgaa
cagagaacagaggaggaggacgacgaagaggaggagaggatcccagatcttcggaaggat
gacatgatggcgaggaggaccggtgcttttaacaagcagaacgtgacagtgtcctacaac
cgtttcctgcctctgcccggcctcaaacgctgcacacaaggagaggacatggctgatgct
gccccaaaaagcaagagggaagcgcaggcagacgggagcaagaaactgaccgtcaggagt
gtttgccctaaagcggaagcggctcagccacatccggacgcagcggtgattcgatccgcg
ccccacagcgaacgtgaacgcgatgaggacgacggtgcgtgcggtgagaacgagcccgtg
ccggacctggagaaggacgacatgatggctcgcaggactggagcctttcaagcacccgtt
gtagccagagctaatcagtccttcaatcagttccttcccatgccgggatcggtcaaatat
aacatcagcccagtgtctgcaatgaagcagatccacagaagccctaaatccacagggaac
gtggccagtggcagcagcactgtcaccgtggcagcagaacctcaaagcccgtcctccaaa
gccccaaacagcagcaggtgtgaagggcagaccggagaacgggcagtggtgggaggaaaa
caggaaggagacgtgaaaatccccaaggaaccagtcactgtggctgaaccaccttctcct
tcaccactcccaccttcactcagccctgctgtcccagtctgcaaagtggaggcagacttg
gaaagacagcgttccgaggataaggttgaagaatgtgtggaagagagaaagagggatgtg
aatgagcaagcggcaaagaaacccttctggctgctggaagatgagctccctcccatgatg
atgagccggcgagttacttttatgtctgaggacacagagagtgtgagcctgggggacatg
cttaacgaggaggaggtgggacacatgccgcaactgagccaatcacggtacgagcgcatg
cacgaacagtacaacagcttcctggaggacgaggaccactggcaaaatgacctggcccgc
tggaagaaccgccgccgcagcacgtcccaggagctgatcaggaaggaggaagagaggaag
aggatagagaaaaggatgaagggacctgacgggaagaggaagagcattaagacctacaaa
gagattgtggaggagaaggagcgcagagaggaggagttgtgtgaagcctacaggaatgca
gccactccagaggaggcagccatggtcctgcagcgctacgctcttcgcttcaccatcagc
gacgccattctggacagcctgaaactgccgagggccacctccacacctcgaccagaccta
aatcagtcgaacgaggagcacaagccctcatcaccaatgacggactctgaaacatctgac
cctcaacacaaatcagaaccagctgctacgttagaggagcgacaggtgaaggcaggtgac
gctgaggcccccggctccccagcacccgacagccttctctccacagtcacaaagtcggat
aataaaccgcctcaaacgttagagcttaatgaagttcaggccaaacacactagcagacct
ccagcagaactgatctcaggaggtgctccgactgaaaccaaccacgctccacctcagagg
agaccagtgcagcctcacacaactcagccggttcagaccctcccctccccctcccctccg
tgtgtgccccccaggcctgtccccctgctggcagccaagccctactgccagcccaagaac
gcacagcctggacacaagcctgtgaagatggacggtttagtgcgagtaaacggagaacca
gcggacacttccacacctgcgtcttctcagcatttacctcaggagattaaagacattgcc
cccaaacactccgagaaagacctcacacccaaacagatggagaaagacgttacacagaaa
cagacgcaaaacaatgttccacctggggagacagagataaaaacggagactagccatcag
ccatcagcaccaccgacagagaaaccaagctcgtcttcaggctccgccatcagctccctg
attggaggccgaaactgtgtcatcacaaccaccatcgtcacagaactcacgcagactctg
gtggagccttttcatccagatatccagaacaatgaacaggtgaacggcaccacagcctcg
tttgggcaaccagcagaggagaaggtggctcagccagcgacagacagcagcgagcaggaa
catcctcccactgtcatggaaggactggaggagagcagtgtttctattgaaacccccatg
ttgaacttggctaaacgtgtaaatcactgggtctgggaccccaatgaggagcgtaaacgc
ctggaaaggtggcagcaggagcaggagcgcctcctacaggtaccccggtggaatagcgtg
cacgtgcatggctccgtcaacagaagacacaagctgcactggttgcgtgtcatatgtggg
agtgcggtgatcagcttatacactgtgtctctgcaggagcagtatcagaaagaacaagag
aaactgaagaaggagtgggagaaagcccagctggaggtggaggaggaggagaggaaacac
aacgaagaggagagacgtattctagaggagactgtaacgcccctcagtcctacgggcttg
ttgatccagccgccgggccaagcagagatgaattcagcagctccagaaaacatcagtgca
gagaaaaggaaccttccaccgcagcaaagcagccaaagaatctccatggggagcgaggat
cagcacgcgtccaagctgcactttttccaggattctgcacgtgatagtgagccgtcaaag
aaacaggagctgtggaaaacgtcctccttggaccgaaactcccaactaaaccaggcccaa
gctgttaaaaggtctggatcctatgatgtggtatcagacaagcagcagtcctcctcatcg
ttaccacagcctccttcacccagcaggtgtgttagtgggaagaggctttgttctggttgc
tctcaacctctggggaaaggagctgccatgattatcgacacactgggtctctttttccac
gtacactgtttcaagtgtggagtgtgtgatgggcagcttggtgacgcaactgcaggaact
gacgtgaggattcgtaatgggctgctaagctgtcatgagtgctacattgcatctcggggc
agggggcagcccaccactctatga
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