Betta splendens (Siamese fighting fish): 114853187
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Entry
114853187 CDS
T08231
Symbol
sh3rf1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bspl01009
]
114853187 (sh3rf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bspl04121
]
114853187 (sh3rf1)
Enzymes [BR:
bspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114853187 (sh3rf1)
Protein phosphatases and associated proteins [BR:
bspl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114853187 (sh3rf1)
Ubiquitin system [BR:
bspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114853187 (sh3rf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_4
zf-RING_11
Prok-RING_4
zf-Nse
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
114853187
NCBI-ProteinID:
XP_029002089
EnsemblRapid:
ENSBSLG00000003324
UniProt:
A0A6P7M621
LinkDB
All DBs
Position
4:complement(27987060..28009544)
Genome browser
AA seq
859 aa
AA seq
DB search
MDESVLLDLLECPVCLERLDASAKVLPCQHTFCRRCLQGILGSRGELRCPECRTLVECAV
DELPSNILLVRLLDGIKQRPRRAGPGAGVCANGTSGAVARAHGTGTRDQAAPGAQPQRAQ
AKSTLVRGVPQLPCAKALYNYDGKEPGDLKFSKGDIIILRRQVDENWYHGEVGGVHGFFP
TNFVQVIKPLPQPPPQCKALYDFELKDKEADKDCLPFSKDDILTVIRRVDENWAEGMLGD
KIGIFPISYVEFNSAARQLIELDKPSDSTGDAGEGASSGPQSNGAQRAGEKKNSKKRHSF
TSLTMSHKPMLAPPPQRHSMEISGPVLISSSNPTAAARIGEISGGLSCSAPSQVHICTTG
LIVTPPPSSPVTTATVFTFPSETSYTSIAVDALPPPPPPPPQSSAAGAAYPLTAGQRPSP
SISDQSGRQRPTVYVAMFPYIPRKDDELELRKGEMFLVLERCQDGWFKGTSMHTGKIGVF
PGNYMSPVSRTASGSTQPKVPMSLCTQAGRGVTIVSPSPAPLGAIVQGPDFSKPTTVCSS
VASASSQPAAVVTVAQTATGQQPKVPLHVSSQMTVNQARNAVRTAACHSQDRPTAAVTPM
QSATPVTYLPHLVVCPQPSSGPPQSCTRAGVAMGCAASSLTPPNVSAALLDGDALRPVPV
GPGNGSALSAMSNSTALACRLEKDVKREKKSLLKLLSSNKKKSRPSPPSSPTLEAEQAAA
GEMLHGAMGHDTSPPSCSVSCLESESAAAVASASSPSSSSSLPEPSHWKSSPLDGCAPIA
PPPRQPCSSLVSQHHDARPIICERYRVVVSYPPQSEAELELKEGDIVFVHRKREDGWFKG
TLQRNGKTGLFPGSFVDLI
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtcagtgttgttggatttgctcgagtgccccgtttgtctggagcggctcgat
gcctccgcaaaggtgcttccctgtcagcacaccttctgccgcaggtgcctccaaggcatt
ctggggtcacgcggggagctgcgctgcccagagtgccgcacgctggtggagtgcgccgtg
gatgaactccccagcaacatcctcctggtgcgcctgttggacggcatcaagcagcggccc
cggagggctggtcctggagctggtgtttgcgcgaatggtacatctggagctgtggccaga
gcacatggcactgggaccagggatcaggccgcaccaggagcacaaccccagcgagctcag
gccaagagcacccttgtccggggtgtccctcagctcccgtgtgcaaaagcgctctacaac
tatgatggcaaggaaccaggagacctcaagtttagcaagggtgacatcattattctgcgg
cggcaagtggatgaaaactggtaccacggagaagtgggtggagtccacggctttttcccc
accaactttgttcaggtcatcaagccgctgccacagccaccacctcagtgcaaagctctg
tatgactttgagcttaaagacaaggaggcagacaaggactgtctgcccttctcaaaggat
gatatcctgaccgtgatccgcagagtggatgaaaactgggcagagggtatgctgggagat
aaaattggaatctttccaatctcctatgtagagttcaactcggcagctcggcagcttatt
gagttggacaagccgtcagactccactggagacgctggtgagggggcctcctcaggcccc
cagagcaatggtgcccagcgagcaggggagaagaagaacagcaagaagcgacattccttt
acttctctcactatgtcccacaaacccatgctagcgcctcctccccagcgccactcaatg
gaaatcagcgggccggtcctcataagctccagcaatcccacagcagctgctcggatcgga
gagatcagtggggggctttcctgtagtgcaccatcacaggtacacatttgcacaactgga
ctgattgtgaccccaccccctagcagtccagttaccacagcaacagtcttcacgtttccc
tcggagacgagctacacatctatagctgtggatgctcttccgccacccccacctcctcct
ccacagtcctctgctgctggagcagcatatccactgactgccggacagagaccctccccc
agcataagcgaccaaagtgggagacaaagacccacagtctatgtggccatgtttccatat
attccccgtaaggacgatgagctggagctaaggaagggagagatgtttttagtgttggaa
cgctgtcaggatgggtggttcaagggcacctccatgcacacgggcaagattggagttttc
cctgggaactacatgagtcctgtcagtagaacggcttcagggagcacccagcccaaagtg
cccatgagcctgtgcactcaagctggtagaggggtcaccatcgtcagcccctctcctgct
ccccttggggctattgttcaagggcctgacttcagtaaacccaccacagtgtgctccagc
gttgcctctgccagctctcaacctgcagctgtggtgacggtggctcagacagccacgggc
cagcagccaaaagtcccgctgcatgtcagctcccagatgactgtgaatcaggctcgcaat
gcagtcaggacagctgcgtgccacagtcaggaccggcccaccgcagcagtgactccgatg
cagtcggcgacgcccgtgacctatctcccacacctcgtggtttgcccgcagccttcctcc
ggacctccccaaagctgcactcgagccggagtggcgatgggctgtgctgcttcctcgctg
actccacccaacgtcagtgctgcgttgttggacggggatgctctgcgcccggtgcctgtt
ggccctgggaacggctcagccctcagtgctatgtccaacagcacagctctcgcctgtcga
ctggagaaggatgtcaagagagaaaagaaaagtcttctgaagctcttgtcctccaataag
aagaagtcacgtccatcgcccccctcctctcctaccctggaggcagaacaagctgctgct
ggagaaatgctgcatggtgccatggggcatgacacctcccctccctcctgctctgtcagc
tgccttgagtctgaatctgctgctgctgttgcatctgcgtcttcgccctcatcatcctct
tcacttcctgagccctcccactggaaaagcagtcccctggatgggtgcgctcccattgct
cctcctccccgccagccgtgctcctctctcgtatctcagcaccatgacgcaaggcccatc
atatgtgagaggtacagggtggtggtatcgtatcctccccagagcgaggccgagttggaa
cttaaggaaggcgacattgtgtttgttcacaggaagagggaggacggctggttcaaaggc
acgctgcagaggaacggcaagacgggactgttccccggcagctttgtagacctcatctga
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