Betta splendens (Siamese fighting fish): 114853794
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Entry
114853794 CDS
T08231
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor Sox-2-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bspl03000
]
114853794
Transcription factors [BR:
bspl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114853794
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Reo_sigma1
Motif
Other DBs
NCBI-GeneID:
114853794
NCBI-ProteinID:
XP_029003428
UniProt:
A0A6P7MB43
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Position
4:complement(2603191..2607786)
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AA seq
324 aa
AA seq
DB search
MYNMMETELKPQAPQTNPGGTGTTNTSGTGNNQKNSQERVKRPMNAFMVWSRGQRRKMAQ
ENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMK
KDKYTLPGGLLAPGGNGMGTGVGVGVGGGLGGGVNQRMDSYAAHMNGWTNGGYGMMQEQL
SYQHPGLNAHNRARLQSMHRYDMSALQYNTMTSSQSYMNGSPTYSMSYSQQSTPGMTALG
SMGPSSVVKSESSSSSPPVVTSSVPPGLRPGACQSGDLRDMISMYLPGAEVSEQSAQTRL
HMSGHYQSAVPGTTINGTLPLTHM
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggagactgaactgaagccccaagctccccagaccaacccggggggc
acgggcaccaccaacacgtccggcaccggcaacaaccagaagaacagccaggagcgggtc
aagagacccatgaacgcgttcatggtgtggtcccggggccagaggaggaagatggcgcaa
gaaaaccccaaaatgcacaactcggagattagcaagagactgggggccgagtggaaactt
ctgtcggagagcgagaagagacccttcatcgacgaagccaagaggctgcgggccctgcac
atgaaggagcacccggattacaaataccggccccggcgaaaaaccaagaccctcatgaag
aaggacaagtacaccttgcccggcggactgctcgctcccggaggaaacgggatgggcacg
ggagtcggtgtgggagtggggggcggactgggcggcggcgtgaaccagcgcatggacagc
tacgcggcgcacatgaacggctggaccaacggcggctacggcatgatgcaggagcagctg
agctaccagcacccggggctgaacgcgcacaaccgggccagattgcagtccatgcaccgc
tacgacatgagcgccctgcagtacaacaccatgaccagctcccagagctacatgaacggc
tcccccacatactccatgtcctactcccagcagagcacgccgggcatgaccgccctgggc
tccatggggccctcctcggtggtgaagtccgagtccagcagctccagcccgcccgtcgtc
acctcctccgtcccacccgggctccgccccggtgcttgccaaagcggggatctgagggac
atgatcagcatgtacctgcccggggcggaggtcagcgagcagagcgcccagacccggcta
cacatgtccggccactaccagagcgccgtgcccgggacgacgatcaacggcacgctgccg
ctgacgcacatgtaa
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