Betta splendens (Siamese fighting fish): 114853923
Help
Entry
114853923 CDS
T08231
Symbol
rxrgb
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X4
KO
K08526
retinoid X receptor gamma
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03320
PPAR signaling pathway
bspl04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
114853923 (rxrgb)
03320 PPAR signaling pathway
114853923 (rxrgb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bspl03000
]
114853923 (rxrgb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
bspl03310
]
114853923 (rxrgb)
Transcription factors [BR:
bspl03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
114853923 (rxrgb)
Nuclear receptors [BR:
bspl03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
114853923 (rxrgb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
114853923
NCBI-ProteinID:
XP_029003665
UniProt:
A0A6P7MAN5
LinkDB
All DBs
Position
4:6068424..6079691
Genome browser
AA seq
465 aa
AA seq
DB search
MWHTMASPATGGSPVRDMGYGHYSAGPMSTAHSHPPPMGGMVGHPSVISTSRPLPSPMST
LGSPMNGLASPYPVITSSMGSPSVSLPSTPNMNFGPLSSPQMNSMNSVSSSEDIKPPPGL
QNLGSINYQCTSPGGMSKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDN
KECLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKERGENEVESTSGCSEEMPVDK
ILDAELAVEPKTETRGDGSPGNSTNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQ
VILLRAGWNELLIASFSHRSVTVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKM
KDMQMDKTELGCLRAIVLFNPDAKGLSNPSEVEGLREKVYASLESYTKHKYPDQPGRFAK
LLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtggcacacgatggcttcacctgcgactggggggagcccagtgagggacatgggctat
ggccactactctgcaggcccaatgagcacagcccacagccacccgccccccatggggggc
atggtaggtcacccgtcagtcatcagcacctcaaggcccctgccgtcccccatgtcgacc
ttgggctccccgatgaacggcctggcctcaccctaccccgtcattacgtcatccatgggc
tcgccgtccgtgtcgctgccgtccacgcccaacatgaactttggaccactcagcagtcca
cagatgaactctatgaacagcgtcagcagctcagaggacatcaagcctccgccgggccta
cagaacctggggagcataaactaccagtgcaccagcccgggggggatgtcaaagcacatc
tgtgccatttgcggggaccgatcctcagggaagcactacggcgtctacagctgcgaggga
tgcaagggcttcttcaagaggaccgtccgcaaagacctctcctacacgtgtcgagacaac
aaagagtgcctgatcgacaagcgccagcggaaccgctgccagtactgccgctaccagaag
tgcctggccatgggcatgaagcgagaagcggtgcaggaggagcggcagcgcggcaaggag
cgcggcgagaacgaggtggagtccaccagcggctgcagcgaggagatgcccgtggacaag
atcctggacgccgagctggccgtggagcccaagacggagacgcgcggcgacggcagcccc
gggaactcgaccaacgaccccgtcaccaacatctgccaggcagcggacaagcagctcttc
accctggtggagtgggccaaacgcatcccgcacttctccgagctgcccctcgacgaccag
gtcatcctcctccgagcaggctggaacgagctgctcatcgcctcgttctcgcatcgctcg
gtcaccgtaaaagacggcatcctgctggcgacgggcctccacgtccacaggagcagcgcc
cacagcgccggcgtgggctccatctttgaccgagttctgaccgagttggtttccaagatg
aaagacatgcagatggacaagacggagctgggctgcctgcgagctatcgttctcttcaat
ccagatgcaaaaggtctttcaaacccatcagaggttgaagggctgagggaaaaagtctac
gcctcgttggagtcgtacacaaaacacaaatacccagatcagcccggcaggtttgccaaa
ctcttgctccgacttcctgccctgcgctccatcggcctcaagtgcctggagcatctgttc
ttcttcaagctgatcggggacacgcctatcgacaccttcctaatggagatgctggaggcg
ccgcatcagatcacatga
DBGET
integrated database retrieval system
