Betta splendens (Siamese fighting fish): 114853939
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Entry
114853939 CDS
T08231
Symbol
lingo3a
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bspl04131
]
114853939 (lingo3a)
Membrane trafficking [BR:
bspl04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
114853939 (lingo3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_6
LRRNT
LRR_9
V-set
Cupin_1
Ig_PDGFR_d4
Motif
Other DBs
NCBI-GeneID:
114853939
NCBI-ProteinID:
XP_029003691
LinkDB
All DBs
Position
4:25024535..25048148
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AA seq
610 aa
AA seq
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MEVRMGRDAGCLLPVLFLLLMTTAPPAQSQGCPQRCDCVARLKSVSCFGKRLSALPDGIP
QDTKVLDLSGNKLRWVEHSDLLPYPRLEKLDLSENMISVLEPNAFSNLQNLQSLSLRGNQ
LKLVPMGAFSRLSNLTALDLSGNKIVILLDFTFQDLKSLKNLEVGDNDLVYISNKAFLGL
VGLRELTIERCNLTSVSSQSLSYLHNLVTLRLRYLSISALEDQNFRKLGNLRGLEIDHWP
FLEYISPHSLQGLNLSWLSITHTNITSVPTSALRSLAHLTSLNLSYNPISVLESWALRDL
VRLKELHMVNTNLAVVQPYALGGLRQIRLLNFSTNSLVTLEEAAFQSVNSLEVLRLDGNP
LACDCRLLWILQRRKTLNFDGXVPVCMTPVEVQGRALNAFSDSALFDHFTCQKPKIRNRK
LQQVSAREGQVVSFVCRAEGEPTPVIFWISPQRRRITTKSSGRLTVLPEGTLEIRYAQIT
DSGTYICIASNAGGNDTYFATLTVSGLPLDAVLLANRTYYTGDLNDTNLNDTRVFLKFTL
DLKTILISTAMGCIMFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPAASGGQG
GARKFNMKMI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgagaatgggccgggatgcaggctgcctgctgcccgtcctgttcctgctgctg
atgaccacagcgccacccgcccagagccaaggatgccctcaacgctgcgactgcgttgca
cggctcaagagcgtgtcgtgcttcgggaagcggctgtcggcgctgcccgacggcatcccg
caggacaccaaggtcctggacctgtctgggaacaaactccgctgggtggaacacagcgac
ttgctcccgtatcctcgtctggagaagttggacctgagtgaaaacatgatcagcgttctg
gaacccaatgccttttccaacctgcagaacctgcagtcgctgtcactgcgggggaaccaa
ctgaagctggtccccatgggggccttctcccgcctctccaacctaactgcactggatctc
agtgggaataagattgttattcttttggactttactttccaagacctgaaaagtctaaag
aacctggaggttggagacaatgatctggtttatatttccaacaaagccttcctgggccta
gtggggctgagggagttgactatcgagaggtgcaacctgacctctgtgtccagccagtcc
ttgtcttacctccataacctggtgactctgcggcttcgctacctcagtatctccgcctta
gaggaccaaaacttccgtaagctggggaacctgagggggctggagatcgatcactggccc
tttctggagtacatctccccccacagcctgcagggtctcaacttgtcctggttgtccatt
acgcacaccaacatcacctctgtgcccacctctgccctgcgcagcctggctcacctcacc
agcctcaacctctcctacaaccccatctctgtgctggagtcctgggcactgcgggacctc
gtgaggctgaaggagctgcatatggtcaacaccaacctggcagtagtgcagccatatgct
ctgggaggcctgagacaaatccgccttctcaacttttccaccaacagcctggtgacgctg
gaggaggccgcctttcagtccgtcaactctctagaagttctgcgtctggacgggaaccct
ctggcctgcgactgccgcctgctctggatcctccagcggaggaagaccctcaacttcgac
ggcngcgtccccgtgtgcatgacgcccgtggaggtgcaagggcgagctctcaacgcgttc
tccgactcggcgctcttcgaccacttcacctgtcagaagcccaaaatccgcaacaggaag
ctgcagcaggtgtcggcccgcgaggggcaggtggtgtcgttcgtgtgcagggccgagggt
gagccgacgccggtcattttctggatctccccgcagcgacggcgcatcaccaccaagagc
agcggccgcctgaccgtgttgccagagggcacgctggaaatcaggtacgcccagataacc
gacagcgggacctacatctgcatcgccagcaacgccgggggcaacgacacctacttcgct
acgctcacagtcagcgggctgcctctggatgcagtgctcctggccaaccgcacctactac
acaggggacctcaacgacaccaacctgaacgacaccagggtcttcttgaagttcactctg
gacctcaagaccatcctcatatccacagcgatgggctgcatcatgttcctgggcgtggtg
ctgttctgtttcattctgctgttcgtgtggagtcgagggaggggtcagcacaagaacaac
ttttcggtggaatactccttcaggaaggtggacggacctgcagccagtgggggacaaggc
ggcgctcgcaagttcaacatgaagatgatttga
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