Betta splendens (Siamese fighting fish): 114854020
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Entry
114854020 CDS
T08231
Symbol
rorca
Name
(RefSeq) RAR-related orphan receptor C a
KO
K08533
RAR-related orphan receptor beta
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bspl03000
]
114854020 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
bspl03310
]
114854020 (rorca)
Transcription factors [BR:
bspl03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
114854020 (rorca)
Nuclear receptors [BR:
bspl03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
114854020 (rorca)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
114854020
NCBI-ProteinID:
XP_029003875
UniProt:
A0A6P7MB96
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Position
4:complement(24561251..24573759)
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AA seq
472 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLNLGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSHECVGAGAHEENVDMAD
QGGAYRRGSTTNLSDLDDITMLQEGLLFDLPLTPEDGGDYCSLDMMGGSAGSGSSSQSSP
EQTSSDFVPNNSIKHEYQLLHESGLFAHSIFNPQPEGFSVHEIERITLSVVKSHFETSQH
STDDLKRMAWTLYSAEETRSYQTKSAETMWQQCAIHITNAIQYVVEFAKRISGFMDLCQN
DQIILLKAGCMDVLLIRMCRAYNPINNTMLFDGKFATLTLFKALGCDDLVNAVFELAKSL
SRIQMSEEEMALFTAAVLLSPDRPWLTDVQKIKKLQEKVYAALQHCLQKEGAPEEKLAKM
VSKLPVMKSICNLHIDKLEFFRLVHPKTAYTFPPLYREIFGSEISFPDSTEG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaggtgattccatgtaaaatctgtggagacaaatcatcagggatc
cactatggtgtcatcacctgtgaaggctgtaaggggttctttcgacgcagccagcagaac
aatgccatgtactcctgctcacgtcagaggaactgtctgattgaccggaccaatcgcaac
cgatgtcagcactgcaggctgcagaagtgtctcaatctgggcatgagccgcgatgctgtc
aagtttggtcgaatgtctaagaaacagcgggacagcctgtatgcagaggtccagaaacac
cagcagtcccatgagtgtgttggggccggagcccatgaggagaatgttgatatggccgac
caaggcggtgcttacagacgaggttccaccaccaacctcagcgatctggatgatatcacc
atgctgcaagaaggcctcctcttcgacctgccgctaacgccggaggatggtggagattac
tgtagcctggacatgatgggtggcagcgcgggcagcggctcgtcctctcagagttcaccg
gaacagaccagctcggactttgtccccaacaacagcattaagcacgagtaccagctttta
cacgaatctggactctttgcgcattcaatcttcaacccgcaacctgagggcttctctgtt
catgaaatagagcgcataactctgagtgtggtgaagtcccactttgagacgagccagcac
agtacagacgatctgaagagaatggcgtggaccttgtatagtgcagaggagacacgctca
taccagactaagtcagctgagacgatgtggcagcagtgtgccattcacatcaccaacgca
atccagtatgtggtagagtttgccaagcgcatctcaggcttcatggacctctgtcagaat
gatcagattatcctcctcaaagcaggttgtatggatgttcttctgatccgtatgtgtcga
gcctacaaccccatcaataatactatgctctttgatggaaagtttgccactcttacgctt
tttaaggctcttggctgtgatgatcttgtgaacgcagtgtttgaattggctaaaagcctg
agtcgcatacagatgtctgaagaggagatggctctgtttactgctgctgtgctgctctca
ccagaccggccctggctcacagatgtgcagaagataaagaagttgcaggagaaagtctat
gcggctttgcagcactgcctgcaaaaggaaggagcaccagaggagaaactagctaagatg
gtgtcaaagcttcctgtgatgaagtcaatttgcaaccttcacatcgacaaactggagttc
tttcgcctggttcatcctaagacagcgtacacgtttcctcctctctatagggagattttt
ggcagtgaaatttccttcccagactccacagagggctag
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