Betta splendens (Siamese fighting fish): 114854031
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Entry
114854031 CDS
T08231
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bspl04040
]
114854031 (trpc1)
Ion channels [BR:
bspl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114854031 (trpc1)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
114854031
NCBI-ProteinID:
XP_029003901
UniProt:
A0A6P7MA68
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Position
4:18701631..18710207
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AA seq
796 aa
AA seq
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MHISVWPYSLSVVMAALYQGTDASSPDKFLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEENRHGELNVNCVDVLGRDAVTISIENENLDILQLLLEHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELSA
DLKELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSSEDQVDKRGLLE
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGETASYRRKHTCLKIATVLSVAMLWP
LLSVCYLLGPRSRVGQIIHTPFVKFIIHSASYFTFLLLLNLYSLVYNEDKKNTMGPALEM
IDYLLILWIIGMVWSDVKRLWYDGLEDFLDESRNQLSFVMNSLYLATFALKIVAHSKFKN
MADTERRKWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKF
LGLFLLVLFSFTIGLTQLYGKDQRDKDKHPPKDCEGIFCQQQSNDAFHTFMGTCYALFWY
IFSLAHVALFVTRISYTEELRSFVGAMIIGTYNIVVVIVLTKLLVAMLHKSFRQIANHED
KEWKFARAKLWLSYFDDKCTLPPPLNILPSPKTVCYLVTSMRKWICSHTSKGKVKRQNSL
KEWKNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMRD
LLGFRTSKYAMFYPRS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgtttggccgtactcgctctccgtcgtaatggcagcgctgtaccagggc
acggacgcgtcctctccggacaaatttctggccttgaaagacgtgcgggaggtgaaggag
gagacgacgctggacgagaagctcttcctgctggcgtgcgagaaaggggactactacatg
gtgaagaagctgctggaggagaaccgccacggggagctcaacgtcaactgcgtggacgtg
ctgggccgcgacgccgtcaccatctccatcgagaacgagaacctggacatcctgcagctg
ctcctggagcacggctgccaggccacggatgccttgctggtggccatagactccgaggtg
gtgggagctgtggacattctcctcaaccacaggcccaggcgatcctctaagccctccatc
gccaaactgatgcagcgcatccagaacccggagtactccaccaccatggacgtggctccc
gtcatcctggcagcccacaggaacaactacgagatcctgaccatgctgctgaagcaggac
atctccctgccccggcctcacgccgtcggctgcgagtgcacgctctgcaacgccaagaac
aaaaaggacagcttgcgacactccaggttccgcctggacatctaccggtgccttgctagc
ccctctctgatcatgctgactgaggaggaccccatactcagggccttcgagctgagcgcg
gacctcaaggagctcagtctggtcgaggtggagttcagaaatgactacgaggagctggcg
aagcagtgcaagatgttcgccaaggacctgctggctcaggcgcggaactcccgggagctc
gaggtcattctcaaccacacgtccagcgaggaccaggtggacaagaggggcctgctggag
gagcgcatgaacctcagccggctcaagctggccatcaagtacaaccaaaaggagtttgtg
gcccagtccaactgtcagcagttcctcaacacggtgtggttcggcgaaacggccagctac
cgccgcaagcacacgtgcctgaagatcgccacggtgctgagcgtggccatgctctggccg
ctgctgtccgtgtgctacctgctggggccgcgctcccgcgtgggccagatcatccacacg
cccttcgtgaagttcatcatccacagcgcgtcctacttcaccttcctgctgctgctcaac
ctctactcgctggtgtacaacgaggacaagaagaacaccatgggccccgcgctggagatg
atcgactacctgctcatcctctggattataggtatggtgtggtcggacgtgaagcgcttg
tggtacgacgggctggaggacttcctggacgagtcgaggaaccagctgagcttcgtgatg
aactcgctgtacttggccacattcgccctcaagatcgtcgcccacagcaagttcaagaac
atggcggacacggagaggaggaagtgggacgccttccaccccatcctggtggccgagggc
ctgttcgccttcgccaacgtcctcagctacctgcgcctcttcttcatgtacaccaccagc
tccatcctggggccgctgcagatctccatgggccagatgctgcaggagttcggaaagttc
ctgggcctcttcctgctggtgttattctccttcaccatcggactcacgcagctctacggg
aaggaccagcgggacaaggacaagcatccgcccaaggactgcgagggcatcttctgccag
cagcagagcaacgacgcatttcacacgtttatggggacctgctacgccctgttctggtac
atcttctctctggcccacgtcgccctcttcgtcacccgcatcagctacacagaggagctg
cgctccttcgtgggggccatgatcatcggcacctacaacatcgtggtggtcatcgtcctg
accaagctgctggtggccatgctccacaagagcttcagacaaattgctaatcacgaggac
aaagagtggaagtttgcacgggccaaactgtggctgagctacttcgatgacaagtgcacg
cttccgccaccgctcaacatcctcccctccccgaagacggtgtgctacctggtgaccagc
atgaggaagtggatctgctcccacacgtcgaaggggaaggtgaagcgccagaacagcctc
aaggagtggaagaacctgaagcagaagcgggacgagaactaccagaagataatgtgctgc
ctggtgcatcgctacctgacgtccacgcggcaaaagatgcagagcacggaccaggccacg
gtggagaacctcaacgacctgcgccaagacctgtccaagttccgcaacgagatgagggac
ctgctgggcttccggacctccaaatacgccatgttttacccaaggagttaa
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