Betta splendens (Siamese fighting fish): 114854189
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Entry
114854189 CDS
T08231
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114854189 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bspl03009
]
114854189 (rexo1)
Ribosome biogenesis [BR:
bspl03009
]
Eukaryotic type
Pre-60S particles
RNases
114854189 (rexo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
MIEAP
Motif
Other DBs
NCBI-GeneID:
114854189
NCBI-ProteinID:
XP_029004193
UniProt:
A0A6P7MD03
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Position
4:5384484..5393351
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AA seq
1260 aa
AA seq
DB search
MLRPTGFFRGIDCPFYAEYDEGKASRNGCNRPYCHFRHSQQRRASYGAPADAKKQRDVHA
TQKEQGYDPFNPEVVKPEAQQNGKSPASGDISGALELVNKAIEEVRSEVEREKRKLFRIG
DEPYDPSESSSLPSSDAAKSKTPNAHLAYDPGSYQMTSGGYNPTPGCSKYTLDADTQGNK
TNSMEYVPTSLKKPRTHAPQPPSPPPSPKYLKSTSSPKCKYTMDTSRPSTDMEYDPLSNY
SAGIAIKSKRDESAHGIKGDGSKSHKLPVTVFSDEDDVTAVKKLQQQSVDTKKYTFSDSD
GENSGTEYRPTTLSNLHQRKGTTVSVGDIFGKVKRVKTETLVNALTQRNKDDLTQGSYAQ
DNAKSKEKLEKSKDASKGSHQKSGKSEKMHKLEKELNKTSSSKSSSCIGKDKSSIKSTTQ
DSAKKENKSHGKRDDGKNTVKLRTSDTVNKEQKRSDHKIKPVHKVKTESSNKDKNSENCA
SESNKDNTSSKEKAHSKYKDHQHKNGKLDPKRGRNGNKIIKSSSSSSGSTRVNSKGSPAS
SKEKRRRQDGKRRSLSLSHADLFGDESPEEAEPMEVDDTDDEVEEVLVRKSADALKRGQL
NKRKASELTPSSSDDEVDHGLIRGKAGKEEDIDVGIDLSSFQDEMDFDSDPMEECLRIFN
ESNDVKREDKGRQTKQPSRDSDEEKCTESTLTTLFPGQKKRVSHFVAKGNTDGPSKAVVR
PYKRPSAQEVCYQRMQLAQQQATQLSASVKAASQSPSSSFSKDKKRIAHRPSPQLTSSKT
SLAEAKAAVGRGLSPKHTSPAVKAQTTAGILSKTTSTVTQRRLAHTPTMKSTSMKRPVIP
TEFGAKVPTNVRQRYLNTFIDECCKFCPSEEVAFHMALDEEKLVYERSSSKNIYLNLAVN
TLKKLRSKSSSCPSPVTKEPRSVANRRAQSHEEVLGGRLAATTSFTINRMGKQQEEKLIG
ATLYKKLQAYLMTEEQLQEHGYPRPNPAATGKAIMYNLPEKKVITDPFTKICCRCGAEYK
INVNGNCVRKEECSYHWGRLRRHKISGGWETNYSCCASAVGSPGCQVSKQHVQDGRKESF
DGYVSTFSKPLPPNSNAGVFALDCEMCYTTQGLELTRVTVIDSALKVIYDTFVKPESKVV
DYNTRFSGVTQEDLEGTTITLRDVQAVLLSMFSAESILIGHSLESDLLALKLIHSSIVDT
AIVFPHRLGLPYKRALKNLMADYLKRIIQDNVEGHDSSEDASACMELMFWKIKEDAKVKR
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgttaagaccgaccggcttcttccgagggattgactgtccgttttacgcggagtacgac
gagggtaaagccagcagaaatgggtgcaacagaccgtactgtcacttcaggcacagccag
cagagacgagcgtcctacggagcaccggcagatgctaaaaagcagagagacgtccacgcc
acccagaaagaacaaggttacgatcccttcaatccagaagtggtgaaaccagaggcacaa
cagaatggaaaatcacctgcctcaggagacatcagcggtgccctggagctggtcaacaag
gctattgaggaggttcgcagcgaggtggagagggaaaagaggaagctttttcgaattggt
gatgaaccatacgatcccagtgagagtagctctttgccctcatctgatgctgctaaaagc
aaaacaccaaatgcacacttggcctatgatcctgggagttatcagatgacatcaggaggc
tataaccccacccctggttgtagcaagtacaccttggatgctgacacccaggggaacaaa
actaactctatggaatatgttcctacatcattaaaaaagcctcgaacacatgctcctcag
cctccctctcctcccccaagcccaaaatatttaaaaagcacatcttctcctaaatgtaaa
tacaccatggatacttctagaccatctacagatatggagtatgacccattgtccaattac
tcagcaggaattgcaataaaaagcaagagggacgaaagtgcacatggaattaaaggtgat
gggagcaagtcccacaaattaccagtgactgttttttcagatgaggacgatgttacagct
gtgaaaaagctacaacagcagagtgtagacacaaaaaaatacactttttctgactctgat
ggagagaactctggaacagaatatcgtcccacaactcttagcaatctccatcaaagaaaa
ggcacaactgtatcagtgggagatatttttggcaaggtgaaaagagtgaaaactgaaact
ttggtaaatgcactaacgcagaggaataaggacgacttaacacagggctcatatgcccag
gacaatgcaaaatccaaagaaaaactagaaaaaagcaaggatgctagtaagggtagtcat
caaaaaagtggcaaatctgagaaaatgcataagcttgaaaaagaattaaacaagacatct
agtagtaagagtagtagctgcattggtaaggacaaaagttcaataaaaagcacaacccag
gactctgcaaagaaggagaacaagagtcacggaaagagagatgatggaaaaaatacagtg
aaactgaggacatctgatacagttaacaaagagcagaagagaagtgatcataagatcaaa
cctgtgcataaggttaaaactgaatcaagcaataaggataaaaattcagaaaattgtgca
agtgaaagcaacaaagataatacatcgagtaaggagaaggcgcacagcaagtataaggac
caccaacacaaaaatggaaaacttgatcctaaaagaggaagaaatgggaataaaattatt
aaaagcagttccagtagtagcgggagtactcgcgttaacagtaaaggcagtcctgctagc
agtaaagagaaaagaagaagacaagacgggaaacggcgaagtctgagcttgagccatgcc
gatctgtttggagacgagagtccagaggaggctgaaccgatggaggtggatgatacggac
gatgaagtagaagaagtgcttgtgaggaaatcagccgatgctttaaagagaggacaactg
aacaagaggaaagcatcagagctgactccatcttcctcggatgatgaggttgatcatggt
ctgatacgtggcaaggcaggtaaggaggaggacattgatgttggaatagacttgtctagt
ttccaggatgagatggactttgactcggatcccatggaggagtgtttgagaatcttcaat
gaatccaatgacgtaaagagggaagacaagggaaggcaaactaaacagccctcaagagat
tcagatgaggagaaatgcacagagagcactttaaccactctctttcctggtcaaaagaag
agagtctcccattttgttgccaaaggaaatactgacggaccttctaaggcggtggtgcgg
ccgtacaagaggccctccgcccaggaggtctgctaccagcgcatgcagttggcgcagcag
caagccacccagctatcggcgtcagtcaaagctgcctcgcagagccccagctccagcttt
tctaaagataagaagagaatagcgcaccgtcccagcccgcagctaacatcctccaaaacc
agtctggctgaagctaaagcagctgtcggcagagggctgtcccctaaacatacttcacct
gctgtcaaggctcaaaccacagctggtattttgtcaaagacaacatccactgtgacacag
aggcggctggcgcacacccccaccatgaagagtacttcgatgaaacgcccagtcatcccc
actgagtttggggccaaagttcccaccaacgtccgtcagcgctacctcaacaccttcatc
gatgaatgttgcaaattctgtccatcggaggaagttgctttccacatggcccttgatgag
gagaagctggtgtatgagcgcagtagcagtaagaacatctacctcaatctagctgtcaat
actctgaaaaagctgcgcagcaagagcagttcctgcccatcacctgtcaccaaggagccc
aggtcagttgctaacaggagggcacagtcccatgaggaagtgctggggggtcgtcttgct
gctacgaccagttttaccatcaacagaatgggcaaacagcaagaggagaaactcatcgga
gccacactgtataagaagctgcaggcgtacctgatgacagaggaacagctccaggagcat
ggatacccgaggccaaaccctgcagccacaggcaaggccatcatgtacaacctcccagag
aaaaaagtcatcacagatcctttcaccaagatatgctgtcgatgtggagcagagtacaag
atcaatgtcaatggcaactgtgtacgaaaggaagaatgcagttatcactggggacgctta
cgtcgacataaaatctctggaggctgggagaccaactacagctgctgcgcctcggctgtg
ggttctccaggttgccaagtttccaagcaacatgttcaggatggacgtaaggagtcgttt
gacggctatgtctcaaccttcagtaaaccattaccaccaaacagcaatgcaggggttttt
gcattggactgtgagatgtgttacacaacacagggcctagaactgaccagggtgaccgtc
atcgactctgcattgaaagtcatatatgacacgtttgtcaaacctgaaagcaaagtagtt
gactacaacacacgattttcaggggtgacgcaggaggacctagaaggcaccaccatcacc
ctgagggatgttcaggctgtgctgcttagtatgttcagtgctgagtccatcctcatagga
cacagtctggagagcgacctcctcgccctaaagctaatccacagttccattgtggacact
gccattgtattccctcaccgccttggcttgccctacaaacgtgccttgaagaatctgatg
gcagactacctgaaacgcatcatccaggacaacgtggagggccacgactccagtgaagat
gcgtctgcctgcatggagctgatgttttggaagatcaaggaagatgcaaaagtcaaaaga
tga
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