Betta splendens (Siamese fighting fish): 114854263
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Entry
114854263 CDS
T08231
Name
(RefSeq) polycystic kidney disease 1 like 1 isoform X4
KO
K04987
polycystin 1L1
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bspl03037
]
114854263
04040 Ion channels [BR:
bspl04040
]
114854263
Cilium and associated proteins [BR:
bspl03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
114854263
Ion channels [BR:
bspl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114854263
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
PKD
PLAT
Polycystin_dom
PKD_4
PKD_channel
GPS
Motif
Other DBs
NCBI-GeneID:
114854263
NCBI-ProteinID:
XP_029004347
UniProt:
A0A6P7MDA9
LinkDB
All DBs
Position
4
Genome browser
AA seq
2881 aa
AA seq
DB search
MVTQYMNVSTSPHRVQAGETFVVEVHGNLSGSPHQPAGMGEHNLPSIIVHFMDTRSHSSH
LGDVLGDGSFVVASDWIIETLSKYEINVRVPNTPSTPSSTLHLLVAPDDLMISVLRGPLG
VLSCEPFMQRDSATFPRDPITLQVQRSEGDKDSGGGRSCRTVSFTRVECLKSTVAAVRPA
VCDLNVSVSETHLSVYAELFTATSHMLVLNLTLKATYTQNQQSSAGLSNEGEGDNSCMDG
NNEMKNKSNTDINNSEASTSGCYNVTVQVFDPVSRTLLQTYILVQDSTGKLVLNTSSVIS
TKQKLELLFSTTAESDVTVSTPAKPTLLSRTGSYSRGQDAAAVVWLFNQTGTAAVELRAA
NGVFTQNKSTRVCIEGNRKQPPQVKVNPNWQPPTSVLLGPTDTVRIYAARDVYPTDADVI
LAAEADVPDPVEFTWHFGDSTSARATSRTVTKRYSKPGRFEVVAAMSAGRTSVTSNAFRL
EIQRAVKLNRLVHRASVLQNRTVAVSCRVSAGTNLTFLWSFGDGSSRLGQSTEHHVFHRT
GEFRLSVAVSNLVSSASLSSHIFVVDRPCQPPPVKNMGPLQIQVWRHEPVHLGVTYEDEL
DCAVMGGLRYAWTLVDSAGHSLPLPFVHTHGQSLILPARLLHYGAYVAIARVQVVGSVVY
SNYSVRVKVVPSPPVAFIQGGTNVFIRSRSVAMVTLDGRRSYDPDFPLKPLGYSWTCQPV
SSITGSCFSRHVPASSPVLTLPVASLKHHFDQFRFTLTVHSGDGERSASSDVFLTMTPGV
LGKVSLHLPESRGGARVNWDQEFSVRAWCEDCNAPPDIIQFTWSLYMVNASSRPVTEVPF
CDAVDLSLPSTVFEGPSAADPLDSTPVLLRVITSTAGTKQQGEEFLYRSLEESGPSESTD
FPGLALDNSDVLYLDHLSDVFSEFPNEWDSSADWGASFPVLEAEDARARLGEKRKLSGNL
RAVIILVVCKSSSFMNSDYDAPLASVEEGDPGPSAGRPTGVDGETFAAGEESEVHEDEWS
HLVDSRPSVVTQEHTLLDLPRDPVDVGLFESYTYAGRSSSLLSFRPFSLRPGSRYMLEVT
AESHNNLLGRTQLFLKTRAAPTGVMCQVQPAKGVELHTHFSIFCASGREDLVYEYSFSVG
GRSPRTLYQGRDFQYYFRLPSGDPRDHYKVTVYTEVRGANGAATKPCPVTVQVQPSVHRE
SSSHHDPALELSASGLRNLSALVQLGNSMEIRNYVSLLSSILNRLSPDTEPNTHTQTRTR
SALIGTLCELESRDQQSMEDNIRVLTDVVKIINQVSYVSARRVVLHIQTISDLFLESSAP
VQYNLDYKTLSSLITLLSYTLQTAINSPHSSKGVVITQALDSDLRGPTAAPGAFKVHQLA
ADIHQAASDLMLKYIVFHEAPEHRVSTRFISLYATKRSSTVISSGSTTVYVPASLTEQLF
NGIRGESEMKQRAPCLLSVLTEFPRSPFTLPPDATKLSGPVVSLNLYTCGTRRKIHIRSL
TQPVDIELQHPQRNMSSVGEYVLHHNRINYHSFNITQEHLQRAIQFSVSFKPLSSTAFPV
MLLFRMFDRPTPSMHHLNRTHRWEGNTTRITLPPSYLSAAGMGYLALLNAGKAPKHRHLR
EQISYSLAVDSSLCLSWDDQQGSWTRRGCRTQQADAGPTVGCSCHQLQPLTVVQQHLEGS
HDSADLGPFISVSGDPTLPAVLLLAVCLYVLGLAPCRRADAIAEQSQQVRPLPDNSPSDP
HHYAVTVHTGLSSAACMSAKVYIVLYGEDGRSQTREIQVPGCTLFRRNSQDTFVLSTAAS
LGPVWGVHIWHDNSGPSPDWYLSRVEVSEVEREQGKGRSWLFVGRCWLTVSKGDGQVERM
LRVCTGGMSFAEMLRLKLPDYLADLHIWISVLCCPCPHPFTLTQRLTVCLLLLLGYSCVN
AVIVSQMDNQLPFELGATDVSAVSVTTGVLSVLAVLPVATAVSFLFRWREGSGAKRPKRG
KTEKDYFEDDASVNNIIPESHSSCTGEAWIRKLQGTNQTSVSTRILENKESAFQADEPLR
KADALTSGLCTGPVLQNVLAIPEEKRLEDDTELKMRTRNENHKAKDSRDEEIWSSGHGII
SKGGKPSQWCRCLAWTLCLLLSLSCLLVSAVLGTRFSSSKALLWIHSLFVSLTSCIFFIQ
PVMTLVVAVTASLWYRTAPDFHSFSCITELELEALKLHSCRDAFGTKEQFSSSALPQEHC
PYFEELLRARRRARYLRLVRPPTPAQLKKTRGKRRREALMCDALRDLSVCVSMLLLMLCI
TYGSSFHDHYHLNKLVRRRFVRHHDNELILIQKPEDWWTWMQSNLLSELYKNVSAKTEQP
CILFGEPVVWKMEASCSIQGQVSGVNIGPEWLHSFLSRSRTLTYLNSNLEVSKATSPSTC
GLLNCHSVGLGQTKSDAASRLRRLHSDGWLNERTLALKVQFTLYSPAANLFTSVMLVTGR
RLAGVLRPSANVQSVTVYRTPAACDYAAMICQLVFLLLSLLQLCRQVKIVTQQGLMGYCR
TPFHWLEIALLTVTLLHYVYYIHRSVLTMEAAEQLQRRSYAGCVDVNSLAACEHDVRTLH
GLTLFLLTMKCVALLRVSRTTASSAALISHSLSSLFWPLISGLIPLVALSCVGNLLFAQN
SSFNSIPRSLRTLLLCCWGPRPVRSLLLSGYELIYVGGLYLCSTIVWTAVMRSIVSSIVR
RSRRSLSGRTLFFTVAELASSTRQKFSEIVLQQRPTWTENHMGGRTYYLEEFEGLVDELL
LRLNTLSNNLHHETQCYMEEDPVVSPVQPLSSVYAWDFARLEMIDETKMTHHTDAISHGK
NMSASHLLRLKLELELLQLLQQGNQNKSTRAPRTKLVVEALVHEEHEAVASPEKLKPCEE
D
NT seq
8646 nt
NT seq
+upstream
nt +downstream
nt
atggtgacacagtatatgaatgtgtctacatctccacacagagttcaggctggagagacc
tttgttgtggaagtccatggaaacctgagtggaagcccccaccagcccgcagggatggga
gaacacaacctcccctctatcatagtccacttcatggacacgagaagtcacagttcacat
cttggcgacgtgttgggtgatggttcctttgttgtggcatctgactggattattgaaact
ctgagtaaatatgagatcaacgtccgtgtgcccaacactccctccacgccctcctccacc
ctccacctccttgttgctcctgacgacctgatgatctctgtgctccgtgggcctctgggc
gtcctgtcctgtgaacccttcatgcagagagactcagcaacattcccgcgtgaccccatc
acactgcaggtgcaaaggtcagagggagacaaggactcagggggtgggaggtcatgcagg
acggttagcttcacccgagtcgagtgtctcaaaagcactgtggcagctgtgcgtcctgcg
gtctgtgatcttaacgtgagcgtttcagagactcatctgtctgtgtacgcggagctgttc
accgccacgagccatatgctggttctcaaccttactctaaaagccacgtatacccagaat
cagcagagcagtgcaggtctgagcaacgaaggagagggcgataacagctgcatggatgga
aataatgaaatgaaaaataaatcaaacacagatattaataacagtgaagcaagtaccagt
gggtgttataatgtgacggtgcaggtgttcgacccagtcagccggaccttattgcaaaca
tacatcctcgtccaagattcaactggaaaactggtgttaaacacgtccagtgtgatatca
acaaagcagaagctggagttgctttttagcacaacagcagagtcagacgtgactgtttct
acgccagcgaagccgacgttactgtccagaaccggcagctacagcagaggacaggacgca
gcagcggtggtttggctttttaaccaaaccggaacagctgcggtcgagcttcgagctgcg
aatggagtgtttactcagaacaaaagcacgagagtgtgtatagaggggaacaggaagcag
ccaccgcaagttaaagtgaatccaaactggcaaccgcccaccagcgtgcttctcggcccg
actgacactgtgaggatttacgcagccagagacgtttatcccaccgacgcagatgtgatc
ctagcggctgaggcggatgtgcccgaccctgtggagttcacctggcactttggagactcc
acatcagccagggcaacctccaggaccgtcaccaagcggtacagcaaacctggcaggttc
gaggtggttgccgccatgtctgctggtcggacgtccgtcacctccaacgcgttccggctg
gaaatccagagagcggtgaagctcaacaggctcgtccaccgggcctcggtcctgcagaac
cgcacggtggcggtgagctgtcgggtcagcgccgggaccaacctcactttcctctggagc
tttggagacggctcgtccaggctcggacagagcacagagcatcacgtcttccacagaaca
ggggagttcagactcagcgtggccgtgtccaacctggtcagctctgcctctttgagcagc
cacatcttcgtggtggaccggccctgccagcctccccccgtcaaaaacatgggccctctg
cagatacaggtgtggagacacgagcccgttcacctgggggtcacctacgaggacgagctg
gactgtgctgtgatgggcggcctgcgttacgcctggaccctggtggactctgcagggcac
agcctccctttgcccttcgtccacacacacggacagagcctcatcctcccagctcgcctc
ctgcactacggcgcctacgtggccatagccagggtgcaggttgttggcagtgtggtttac
agtaactacagcgtgagggtgaaggtggtgcccagtcctcctgtagctttcatccagggt
ggcaccaacgttttcatccgcagccggagcgtcgccatggttaccctggacgggcggagg
tcctacgaccctgacttccctttgaaaccactcggctacagctggacatgtcaaccagtc
agctccatcaccggctcctgcttcagccggcacgttcctgcgtcctcgcccgtgctcacg
ctccccgtggcttccctgaagcaccactttgaccagttccgcttcacgctcaccgtccac
agcggagacggcgagcgctcggcttcttcagacgtcttcctcacaatgacccccggcgtg
ctcgggaaggtgtcgcttcatttgcctgagagccgaggaggagcccgggtgaactgggac
caggagttctctgtcagagcctggtgtgaggactgcaacgctcctccagacattatccag
ttcacctggagcctgtacatggtcaacgcttcctccaggcctgtcactgaggtccctttt
tgtgatgctgtggacctcagccttccatccaccgtcttcgagggtccttctgcagcagac
ccccttgactcaactcctgtcctcctgagggtcatcacctctacagctggaaccaagcag
caaggagaggagtttctttatcgctctttggaggagtccggtccttcagagtccactgac
tttccaggacttgcccttgacaacagtgacgttctatatttagaccacttaagcgatgtt
ttcagtgaattcccaaatgagtgggattcctctgctgactggggcgcctccttccctgtt
ctggaggccgaggatgcgagagctcgactaggtgagaaaagaaaactgagcggaaatctg
agggctgtgattattttagtagtttgtaaaagtagctcctttatgaattcagactatgat
gctcccttggcaagcgttgaggagggagacccgggaccttcagcaggaagacccacggga
gtggatggtgagaccttcgccgcaggagaggagtcggaggtgcatgaagatgagtggagt
catttggtggattctagaccctcagtggtgacccaggaacacacgttgcttgacttgccc
cgagacccagtagatgttggtctgtttgagtcctacacctacgcaggaaggtcctcgtct
ctattaagcttcagacccttcagtctgaggccggggagcagatacatgctggaggtcact
gctgaatctcacaataacctcttgggacggactcagttgttcttaaaaacccgggccgct
ccaacgggcgtgatgtgccaggtgcagccggccaaaggagtggagttacacacacatttc
agcatcttctgcgcctcggggagagaggatttagtgtacgagtacagcttcagcgttgga
ggccgctcaccaaggacactgtaccagggcagagacttccagtactacttcaggcttcct
tcaggtgaccccagagaccactataaagtgactgtttatactgaagtcagaggtgcgaat
ggggcagcaactaaaccctgtcctgttactgtccaagtccaaccaagcgtccatagagag
tcgtcttctcatcacgatcctgctctagagctctcagcatcaggtctgaggaacctgtcg
gctctggtgcagcttgggaacagcatggagatccgtaactatgtcagtctcctctccagc
attctgaacagactcagcccggacacggagcccaacacacacacacagacacgcacacgc
agtgcgctcattggcacgctgtgtgagctggagagcagggatcagcaatcaatggaggac
aacatccgagttctcacagatgttgtgaaaattataaatcaggtttcttatgtgagcgcc
agacgggtcgtccttcatattcagactatatcagacctgtttctggagtccagcgctcca
gtccagtataatctggactacaagacactcagcagcctgatcacgctgctctcatacacg
ctgcagactgctatcaacagtccgcactcatccaagggtgtcgtcattacacaggcactg
gattcagatttgagaggacctactgctgctcctggtgcctttaaagtgcaccagctggca
gccgatattcaccaagctgcttcagacctgatgctgaagtacattgttttccacgaggct
ccggagcacagggtcagcacccgtttcattagcctgtatgctacaaagcgaagctccaca
gtcatcagcagtggctcgaccaccgtctacgtcccggcttctctgactgagcaactgttt
aatggtatcagaggggagagtgagatgaagcagcgggcaccttgtctcctcagcgtgctg
acggagttcccccgcagccccttcaccctgccccccgatgctacgaagctgagtggacca
gtcgtcagcctcaacctgtacacgtgtggcacaaggagaaagatccacattcgttccttg
actcagccggtcgacatcgagctgcagcatccacaaagaaatatgagctctgtgggagag
tacgtcctccaccacaaccggatcaactaccacagtttcaacattacccaggagcacttg
cagcgggccatccagttcagtgtgtcgtttaagccgctgtccagcacagcgtttccagtg
atgctgctcttcaggatgtttgacaggcccactcccagcatgcaccacctgaacaggact
caccgctgggagggcaacaccacacgcatcactctgcccccctcttatctcagtgctgca
ggtatgggctacctggccctgctgaatgctgggaaagcaccaaaacacaggcacctgagg
gaacagatcagctacagtctcgccgtggacagcagcctgtgtttgtcctgggacgaccag
caggggtcctggacacgccgcggctgcagaacccagcaagcagacgcgggtcccacagtc
ggctgcagttgccaccagctgcagccgctgactgtggtgcagcagcatctagagggcagc
catgactcagccgacctgggcccgttcataagcgtgtccggggacccgactctgcccgct
gtgctgctgctggctgtgtgcctgtacgtgctgggcttggcgccgtgcaggagagccgac
gccatcgccgagcagagccaacaggtccgccctcttcccgataactctccgtctgaccca
caccactacgccgtcaccgtgcacaccggcctcagctctgcggcctgtatgagtgcaaag
gtttatatagtgctctatggtgaagatgggcggtcacagacgagagaaatacaggtccca
ggatgcactctgtttaggaggaactctcaggatacatttgtactcagtacagcagccagc
ctgggcccagtgtggggggttcacatctggcacgacaactctggaccctccccggactgg
tacctcagtcgagtggaggtgtctgaggtggagcgagaacaggggaaagggcgctcgtgg
cttttcgtcggccggtgctggttaaccgtgagcaaaggtgacggccaagtggagcgaatg
ctgcgtgtctgcactggggggatgagctttgctgagatgttgcgtctgaagcttcctgac
tacttggctgacctccacatctggatatctgtgttgtgctgcccctgtcctcacccgttc
accctcacccagaggctcactgtgtgcctgctgctgctgctgggctactcgtgtgtgaac
gcagtcatcgtatcccaaatggacaatcagttgccattcgagttgggagcgacggacgtg
tcggctgtctctgtgacgacaggagtgttaagcgtgttggcagtgttgcccgtggcaaca
gcggtgtcttttctgtttcggtggcgtgagggatcaggagcgaaacgtccaaagcgcgga
aagactgaaaaggactattttgaagatgacgcatcagtaaacaacattataccagagtcc
cattcctcctgcactggggaagcgtggataaggaaactccagggcacaaaccagacgtca
gtgtctactaggatcctggaaaacaaagaatctgcatttcaggcagatgagccgttaaga
aaggcagatgctctaacaagtggactctgtacgggaccagtgcttcaaaatgtgttggcg
attcctgaggagaaacgtttggaagacgatacagagttaaaaatgcgcacaagaaatgaa
aatcacaaggcgaaagattccagagatgaagaaatctggagttctggtcacggcatcatc
agcaaaggggggaaaccatcccagtggtgtcgctgcttggcctggaccctgtgcctgctg
ttgtcgctctcctgcctgctcgtctctgccgtcctggggacgaggttcagcagcagcaag
gctctgctttggatccactcgcttttcgtttcactgacgtcttgcatcttcttcatccag
ccagtcatgaccctcgtggtggcagtgacggcctccttgtggtacagaacagcaccagac
ttccatagtttctcctgcatcacagagcttgaactagaggctttgaaactgcacagctgc
cgcgatgctttcgggacaaaagagcagtttagctcctcagctctcccccaggaacactgt
ccatattttgaggagctgctcagagctcgtcggcgagctcgctacctgcgtctcgtgcgc
ccaccgactccggcacagctgaagaaaacccgtgggaagagaagaagagaggctctcatg
tgcgacgccctcagagatttgtctgtctgcgtctccatgcttctcctgatgctctgtata
acgtacggcagctccttccatgaccattatcacctcaacaagctggtcaggaggcggttt
gtaaggcaccatgacaatgagttgatattgatacaaaagcctgaggactggtggacctgg
atgcagagcaatttgctgagcgagctgtacaagaacgtctcagccaagactgagcaaccg
tgcatcttgtttggagagcccgtcgtgtggaagatggaggcgtcctgctcaattcagggc
caggtctctggagtgaacattgggcctgaatggcttcactcattcctgtcaagaagcaga
acgctaacttatttaaactctaatctggaggtttctaaggcgacgtccccgagcacgtgt
ggcctcctgaactgccactccgttggactgggccaaaccaagtcggatgctgcatccaga
ctgaggcgcctgcattcagacggctggctgaacgagcgcacactggccctgaaggtccag
ttcaccctgtacagccctgcagccaacctcttcaccagtgtgatgctggtcacggggcgg
cgcctcgctggcgtcctccggccctccgccaacgtccagtcggttacggtgtaccgcact
cccgctgcgtgcgactatgctgctatgatatgtcagctcgtcttcctcctcttgtccctg
ctgcagctttgtcgtcaggtgaagattgtgacgcagcaagggctgatgggatactgtagg
acaccgttccactggctggaaatcgctctgctgacggtgacgctgctgcactacgtttat
tacatccatcgctctgttctcaccatggaagctgcagagcagctgcagagacgcagctac
gccggatgtgtggatgtcaactccttggctgcctgcgaacacgacgttcgcaccttgcat
ggccttactctcttccttctcaccatgaagtgtgtggccctgctgagggtgagcagaacc
acagcgtcctctgctgctctcatcagtcactctctctccagcctcttttggccactgatt
tcaggtctgatccctctggtggcactttcctgtgtagggaatctgctgtttgctcagaac
tcctccttcaactccatccctcgctcccttcggaccctgctgctctgctgctggggtccc
aggcctgttagaagcctcctcctgtctggatacgagctcatttacgttggtggtctctat
ctgtgctccactatagtgtggacagcagtgatgaggagtattgtgtcctcaatagtcaga
aggtccagaaggtctctgagtggaaggacactattcttcactgtagcagagttagccagc
agcaccaggcagaagttttctgagattgttttgcagcaaaggccaacatggacagaaaac
cacatggggggaaggacttattaccttgaagagtttgagggtttagtagatgaactgttg
ctgagactcaacaccctctccaacaacctgcaccatgaaacccagtgctacatggaggaa
gatcctgttgtctcacctgtacagccactttccagtgtgtacgcatgggactttgcaaga
ttagaaatgatagatgagacaaaaatgacccatcacacagatgctatttcccatggaaaa
aacatgtctgcatctcacctgctcaggttgaaattagaactggagctattgcagctcctg
caacagggaaatcaaaacaagagcactagggcccctcgtacaaagctagtggtggaggct
ctggtccacgaggagcatgaagctgtagcatcaccagaaaagttgaaaccttgcgaagaa
gactga
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