Betta splendens (Siamese fighting fish): 114854390
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Entry
114854390 CDS
T08231
Symbol
ptchd1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bspl04990
]
114854390 (ptchd1)
Domain-containing proteins not elsewhere classified [BR:
bspl04990
]
Other domain-containing proteins
Patched domain-containing proteins
114854390 (ptchd1)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
114854390
NCBI-ProteinID:
XP_029004553
UniProt:
A0A6P7ME09
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All DBs
Position
4:21268654..21276731
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AA seq
980 aa
AA seq
DB search
MLGSAPGLSGRWERLEPRPRARMLRQVLHAGLRTSFHALGRFVAGHPVFFASAPVLISIL
LGASFSRYRVEEDVESLLAPKHSLAKIEGNLVESLFPVNRSKHALYSDLQTPGRYGRVIV
TTRKGSVLEPLHLDTILKLHRRIYQMQVTVPASGSNSFNYSFSYLCLPDDKNVCIIDDII
RAMEEIQSARAFNRTIPVLRYPITQLADGRQAYIGHQLGGVQGWGPNGAVRGPGLGARGE
AVRSARALQLTYYLQARGSLMDRVAGQWEKAFCAELRHFSALHPKLGLYPSTSSSLRTDF
QFSSVLARRPLLASLGVCGFLAILCCSMRDCVRSKPWLGLLALLSITLSGLTAAGILNLT
GATYNSTYLGIPFVMLGHGLFGSFEMLSSWRRTREDQHVKERVAGVFEDVMLRFSGSTML
HLMTLGLAASPLTNMEAVRLFCRTAALAITISYVYMLSFYSSCLVFTGYLETGYRHGCFC
RRVPKPERLDSKPAWYRCLMYTRYQDEAQSTSVPHAAGHGPPHPPAPSLTHTHVHTHPHA
ANNPNAHAHMVNSAHAHPRTQSTASADPHPQDSHLLLGCVRRCYGDWITNTYVKPFVVLL
YLIYISFGLMGFLQVTQGSDPSALVAMDTATVLYTRAQQRYFSSYSPVIGFYIYESAPYW
NSSVQRDLLEYAKGFQRISWLEAYLNYLSDRNQSTSQPRENFTHILRHSFLREPQFAHFA
DDIIFAERGQGEEPDVAASRIFLVAKTTENKREEMSVLLDTLRRLSLTSQVRFLIFNPSF
VYLDRYAAAVSSPLRHSLLAVLFLLGLSSLAVVEPLVSVWLGLTLLSVQFGVLGFMTLWG
VELDCMSVLCLISALGHSADCSGPLLCSFTSGRGESRTRWVRVALERHGVPSLQTLICYS
AALVPVGSVRSNLTCTLFRCLAVTAGCSALHTLAFLPTLLTFLPPSKNRGHRAGGEGQRQ
EVECVEMNDSTRVVDQITTV
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgctcggcagtgctccggggctttccggtcggtgggagaggctcgagccgcgcccgcgc
gctaggatgctgcgccaggtgttgcacgcgggcctgaggacctccttccacgcgctgggc
cggttcgtggcgggccacccggtgttcttcgcctcggcgcccgtgctcatctccatcctc
ctcggggccagcttcagccggtaccgcgtggaggaggacgtggagagcctgctcgcgccc
aagcacagcctggcgaagatagagggcaacctggtggaaagcctgtttccggtgaaccgc
tccaagcacgcgctttactccgacctccagacaccgggcagatatgggcgcgtgatcgtc
accacccgaaagggcagcgtgctggagccgcttcacctggacaccatattaaagctccac
agacggatctaccagatgcaggtgacggtgccggcctcgggctccaacagcttcaactac
tccttctcctacctctgtctgcccgatgacaagaacgtctgcatcatcgacgatatcatc
cgcgccatggaggagatccagtcggctcgcgccttcaaccgcaccatcccggtgctgcgc
tacccaatcacgcagctggcggacgggcggcaggcgtacatcggccaccagctgggcggc
gtgcaggggtggggccccaacggcgccgtgaggggtccggggctgggagccaggggcgag
gctgtgcgatccgcccgggcgctgcagctcacctactacctccaggcccggggcagcctg
atggaccgagtggctggccagtgggaaaaggccttctgtgcagagttacggcacttctcg
gcgctgcacccgaagctggggctctacccgtccacttcctcgtctctgaggaccgacttc
cagttctcctctgtgctggcgcgccgccccctgttggccagcctgggcgtttgcggcttc
ctggccattctctgctgctccatgagggactgtgtgagatccaaaccctggctgggactg
ctggctctgttgtcaatcacgctgtcaggcctcacggctgctgggattctgaacctgact
ggagcgacctacaactccacctacttgggcatcccctttgtcatgctcggtcacggcctc
ttcggctccttcgagatgctgtcgtcctggagacgaacccgcgaggaccagcacgtcaag
gagcgggtggccggcgtctttgaggacgtcatgctgcgtttctctggctccaccatgctc
cacctcatgactctgggcctcgccgcctcgccgctcaccaacatggaggccgtccggctc
ttctgccgcaccgccgctctggccatcaccatcagctacgtgtacatgctgtccttctac
agctcctgcctggtgttcacgggctacttagagaccggatacagacacggatgcttctgc
cgcagagtccccaaaccggagcgcctggactccaagccggcctggtaccggtgcctcatg
tacacgcgctaccaagacgaggcgcagagcaccagcgtgccgcacgcagccggccacggt
ccccctcacccaccagctcccagcctgacgcacactcacgtgcacacgcacccgcacgcc
gcaaacaaccccaacgcacacgctcacatggtgaactccgcgcacgcgcacccgcgcacg
cagtcgacggccagtgcggaccctcatcctcaggactcgcacctgctgctgggctgtgtg
aggcgttgctatggggactggatcactaacacctatgtcaagccctttgtggtcctgctg
tatctgatttacatctcctttgggctgatgggcttcctgcaggtgacccagggttcagac
cccagtgcgctggttgccatggatacagccacagtgttgtacactcgcgcccagcagcgc
tacttcagctcctactcacctgtcattggattttacatctatgagagcgccccctactgg
aactcctcggtgcagcgggacctgctggagtacgccaagggcttccagcgaatcagctgg
ctggaggcgtacctgaactacctgtccgaccgcaaccagtccaccagccagccccgcgag
aacttcacccacatcctgcgccactccttcctccgcgagccgcagtttgcccactttgcc
gacgacatcatattcgcagagcggggccagggcgaggagcccgatgtggcggcctctcgc
atctttttggtcgccaagacgacggagaacaagcgtgaagagatgtcggtgctgctggac
acgctgcggcggctgtcgctgacgtcgcaagtccggttcctcatcttcaacccctccttt
gtctatttggaccgctacgctgcagccgtcagctcgccgctcagacactcactgctggcg
gtgctcttcctcctcggtttgtcctctctggcggtcgtggagccgctggtgtccgtgtgg
ctgggcctcaccttgctctccgtccagtttggagtactgggctttatgaccttgtggggg
gtggagctggactgcatgtctgtgctgtgtctaatctcggctttggggcactcagcggac
tgcagcggccccctgctgtgcagcttcacctcgggccggggggaaagcaggactcgctgg
gtgagagtggcgctggagagacacggggttccctctctacagacgctcatctgctacagc
gccgccctggtgcctgtcggctccgtgcgctccaacctcacgtgcacgctgttccgctgc
ctcgccgtcaccgccggatgctcggccctgcacaccctggcgttcctgcccaccctcctc
acgttcctgcccccctccaagaaccgcggccaccgggccgggggcgaggggcagagacag
gaagtggagtgcgtggaaatgaacgacagcactcgagtagtcgaccagatcaccactgtt
taa
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