Betta splendens (Siamese fighting fish): 114854407
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Entry
114854407 CDS
T08231
Symbol
trpa1b
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1b
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bspl04040
]
114854407 (trpa1b)
Ion channels [BR:
bspl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114854407 (trpa1b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Ank_KRIT1
DBB
Motif
Other DBs
NCBI-GeneID:
114854407
NCBI-ProteinID:
XP_055364424
UniProt:
A0A9W2XRS5
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Position
4:16949518..16964095
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AA seq
1168 aa
AA seq
DB search
MSRASRSSSHQQHHRHTVRARSSWTQQNGFNLHPLGCPSGRRIPAASSERDAMNFSREVA
RQTSCYTYVIEDDEPGLGSLNVFELTEKGDLTLLENLVRRSPEVLQEKDECGAGPLHHAA
AGGYVTLIQFITTLADSQELNSCDEQGNVPLHWAVERNKPESCRALLDLGADPNILNAAL
LSPLHLAINLGHNSLVELLLSYSATDCNLEGDLGNSPVILACSINNCEALSMLIKHGARL
CQQNKLGHFAIHAAAFAGAKKAMEVILKAGEELGRSAECHINYLDKSKSSPLHLAVRGGN
IDVIRFCIANGAKVDQQQNDRCTPLHLACTQGATEVVKLMLSSVDRVDDIINLTDGACQT
PLHRATIFDHAELADYLISLGAALNHIDCKGHSPLLLATSCGAWRTVALLLSKGANVNVK
DRCGCNFLHLAILQPKGLKNLPEEVLQKTCVKTLLSCEDSEGCTPLHYACRLGIHDSVKN
MLGLSGQVGLACKSKDKKSALHFAAQYGRINTCHRLLESITDSRLLNEGDERGLTPLHLA
SRGGHTKVVQLLLRKGALFHSDYKGLTCLHHAAAEGYTQTVEILLSANPKLLDKTDEDGN
TALHFAARGGHVAAVRLMLNRGAELVLNKNDISFLHEALQNGRKDVVNAVIDNERSTEAL
KLFSPDSSQRCPIFDMIEFQPETYKYLLDRCVRESDDDHNSPDYHIEYDFRWLQAPLEVT
FEEKGKYQPLAALNAMVQYNRIELLNHPVCKKYLRMKWIAYGSRAHLLNMFLYLLGLLPL
THLMVTLRPTMNTTDTGEHQIIMVPTSFIEQSLFLSFCMVMVLVMNIYCIGKEVVQISQQ
RWNYFKDFSNQCDWMSAIFSLLYIIPLMSNAEGSLHWQAGAVAVLNSWIGFLLYLQRFEG
IGIYVVMFGEIMKTLVRIVMLFTYLMLAFGLAFHALMLNQKQFESVPLSVMQTFAMMVGE
LNYQNNFLETYLDNKLPFGFLTYWVFVAFVLLMPILLVNLLIGLAVGDIAEVQRNAALKR
IAMQIDLHTALEDKLPYWFMKRVDKPSVTIYPNRKCSRHYLKQLITGEEETSEVWSRLQA
KSQNCSMIENELRKQKSRMKEMSSLLEKQHSLLKLIIQKMEISSEADECDGPATAKGSMW
PSMSQVKARGHAVSRWVPLMKAIESKRK
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgagtagagcatccaggtcctcatctcaccagcagcatcacagacacacagttcgtgcg
aggagcagctggacgcaacaaaacggcttcaacctgcacccccttggatgtccctccgga
cgccgcatcccggccgcatccagtgagcgcgacgccatgaacttcagcagggaggtggct
cgacagaccagctgctacacgtacgtgatcgaggacgacgagccgggcctggggagcctg
aacgtgttcgagttgacggagaagggcgacctgactctcctggagaacctggtgaggagg
agcccagaggtcctgcaggagaaagatgaatgcggggccggtccccttcatcacgccgcc
gcggggggctacgtcaccctcatccaattcatcaccaccctcgcagactcgcaggagctg
aacagctgcgatgagcagggcaacgtgcccctgcactgggcagtggagaggaacaagccc
gagagctgcagggctcttttggacctgggggccgaccccaatatcctcaacgcggcgctg
ctgtcccccctgcacctggccatcaacctaggacacaacagcctggtggagctgctgctg
tcctacagtgctacagactgtaacctggagggggatctggggaacagccccgtgatactg
gcctgctccatcaacaactgcgaggccctcagcatgctgataaaacacggcgcgaggctg
tgccagcagaacaagctcggccatttcgccatacacgcggctgccttcgcgggcgcaaag
aaggccatggaagtcatcctgaaggctggagaggagctcggccgctcagccgagtgccac
attaactatttagacaagtccaagagcagcccgctccacctggccgtgcgcggtgggaac
atcgacgtcatccgcttctgcatcgcgaacggggccaaagtcgaccagcaacagaacgac
aggtgcacgccgctccacctggcctgcacccagggcgccaccgaggtggtcaagctgatg
ctctcctccgtggaccgcgtggacgacatcatcaacctgaccgacggggcgtgtcagacc
cctctgcacagggctacaatatttgaccatgcagagctggcggactacctcatttctttg
ggcgcagcgctgaaccacatcgactgtaaaggtcactctcctctgctgctggcgacgagc
tgcggcgcgtggagaacggtggccctgctcctgtccaaaggggctaacgtgaacgtgaaa
gacaggtgcggctgtaacttccttcacttggccattctgcagcccaagggcctgaagaat
ctcccggaggaggtcctgcagaagacctgcgtgaagacgctgctcagctgcgaggacagc
gagggctgcacgccgctccactacgcctgcagactgggcatccacgactccgtcaagaac
atgctgggcctctcggggcaggtcggcctcgcgtgcaagtccaaggataagaagtcggcc
ctgcactttgctgctcagtacggccgcatcaacacgtgtcaccggttgctggagagcatc
acggactcccgtctgctgaacgaaggggacgagcgtggcctgacgccgctgcacctggcg
tcgagaggcggccacacgaaggtggtgcagctgctgctgcgcaaaggcgcgctgttccac
agtgattacaagggcctgacttgtctgcaccacgctgcagctgaaggatacacacaaacg
gtggagatcctcctctcggccaatcccaagctgctggataaaaccgatgaagacgggaac
acggcactccacttcgctgcgaggggggggcacgtggctgcggtcaggctcatgctgaac
cggggagcggagctcgtcctgaacaagaacgacatatcgttcctgcatgaagctctgcaa
aacggaaggaaagacgtggtcaacgctgtaattgacaatgagagaagcacggaggctttg
aaactgttctcgcccgactccagccagcgatgtcccatatttgacatgattgagtttcag
cccgaaacctacaagtacctgctggatcgctgcgtgagggagtctgacgacgaccacaac
agccccgactaccacattgagtatgacttccggtggctccaggctccgctggaggtgacg
ttcgaggagaaggggaagtatcagccgctggctgccctcaacgccatggtgcagtacaac
cggatcgagctcctcaaccaccctgtctgcaagaaatacctgcggatgaagtggatcgcg
tacggcagcagggctcatctgctcaacatgttcctgtacctgctgggcctgttgcccctc
actcacctgatggtcaccctcagacccaccatgaacaccaccgacacaggcgagcaccag
atcatcatggtgcccacatcctttattgagcaaagtctgttcttgagcttctgtatggtg
atggtgctggtcatgaacatctactgcataggcaaggaagtggtgcagatatcacagcag
cgctggaattacttcaaggatttttccaaccaatgtgactggatgtcggccatcttctcg
ctcctgtacatcatccctctcatgtccaatgcggagggctctttacactggcaggcgggg
gcggtggcagttctaaactcctggattggattcctcctgtatctccagaggttcgagggc
atcggcatctacgttgtgatgtttggggagatcatgaagacgctggttcgcattgtaatg
ctgttcacgtatctgatgttagcatttggattggcgtttcatgctctgatgctaaaccag
aaacagttcgagagcgtgccgctctcggtgatgcagacttttgccatgatggtcggggag
ctgaactaccagaacaacttcctcgaaacctatctcgacaataaacttccctttggtttc
ctgacttactgggtttttgtggcctttgttctgctcatgccaattctgttggtgaacctg
ttgatcggcttagcagttggggacattgcagaggtccaaagaaatgctgctctgaagcga
attgccatgcagattgacctccacacggctctggaagacaaactcccctactggtttatg
aagcgagtcgacaaaccctccgtcaccatctacccaaatcgcaagtgctcccggcactat
ttaaagcagttaatcacgggcgaagaggagaccagtgaagtgtggagtcgtcttcaggcc
aaatcccagaactgctcaatgatagagaacgagctccgaaagcagaagtccaggatgaag
gagatgtcgagcctgctggagaagcagcacagcctcctgaagctcatcatccagaagatg
gagatcagctcggaggcggacgagtgcgacggcccggcgaccgccaaaggcagcatgtgg
cccagcatgagccaggtgaaggcgaggggccacgcggtgtcccgctgggttccgctgatg
aaggccatcgagtccaagaggaagtga
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