Betta splendens (Siamese fighting fish): 114854522
Help
Entry
114854522 CDS
T08231
Symbol
pcdh10a
Name
(RefSeq) protocadherin-10a isoform X1
KO
K16499
protocadherin delta 2
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bspl04515
]
114854522 (pcdh10a)
Cell adhesion molecules [BR:
bspl04515
]
Cadherins
Protocadherins
114854522 (pcdh10a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
DUF4832
TMEM154
Motif
Other DBs
NCBI-GeneID:
114854522
NCBI-ProteinID:
XP_029004835
UniProt:
A0A6P7ME26
LinkDB
All DBs
Position
1:complement(14022877..14041537)
Genome browser
AA seq
1054 aa
AA seq
DB search
MIWVIFALSILDGAVSQLHYSVPEEQEPGSVVGNIAEDLGLDITKLSARRFQTVPSSRTP
YLEVNLENGALLVKEKIDREEICKQTTPCLLHLEVFLDNPLELFRVEIEVMDINDNPPSF
PETDISVEISESAIPGTRFPVENAFDPDVGTNALSTYDLTNNNYFYLDVQTQSDGNRFAE
LVLEKPLDREQQAVHRYVLTAMDGGIPQRTGTALLVVKVLDSNDNAPTFEQSVYAVNLRE
NSPVGTLVIQLNATDVDEGQNGEIVYSFSSHNVPRIKDLFNIDARTGRIEVAGEVDYEES
STHQIYVQAKDLGANAVPAHCKVLVKLVDVNDNTPEISFSTVTESVSEQDAPGTVIALFS
VSDRDSGENGQMSCEILGDVPFKLKSSFKNYYTIVTDGALDRENTDAYTITVVAKDKGQP
SLATSKSIKVHVSDENDNAPRFTQAVYDVYVTENNVPGAFIHAVSALDPDIGQNALITYS
ILECDIQGMSVDTYVSINQDTGYLYALRSFDYEQLKEFSFMVQAKDAGAAELLSNATVNV
IIVDQNDNVPSVIAPVGKNGTAKEQLPRSAEPGYMVTRIVAMDADDGENARLSYSILRGN
EMGMFRMDWRTGELRTARRISPKRDPQGYYDLLIEVRDHGQPPLSSSASVSVVLVDSVVD
DRKGNHESTSKAKETSLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNLYTCLLAG
DCCLCCGSCCSRQARGRKQKKLSKSDIMLVQSTNVTSGVGPVGQVPVEESGVGGVGGGFG
SHHHQNQNSYCYQVCLTPESAKTDLMFLKPCSPSRSTDADHTNPCGAIVTGYSDQQPDII
SNGSILSNETKHQRAELSYLVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDATNR
GHSAGADLFSNCTEECKALGHSDRCWMPTFVPSDGRQGPDYRSNLHVPGMDATLPDTEVP
SSVNLSDQLTMTSSTASTNDRSFSTFGKDGQRSQSHHSLHHHLHQQQQQQFSSSTLERKE
YDRGTLPYKPTFLCEYQYESSLGPYDFGLVQYRY
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgatttgggtaatatttgcgctctccatcctggatggagccgtctctcagctgcactac
tccgtgccggaggagcaggagcctggctccgtggttgggaatattgcagaggatctgggg
ttggacatcaccaaactttccgctcgccgctttcaaacggtgcctagttcacggacacct
tatctggaggtgaacttagaaaacggcgcgctgctggtgaaagagaagatcgaccgggag
gaaatctgcaagcagaccaccccgtgcctattgcacctggaggtgtttctggacaaccca
ctggagctctttcgcgtggagatcgaagtgatggatatcaacgacaatccccccagcttt
cccgaaacagatatttccgtggagatatcggagagcgccatacccgggacccgtttcccc
gtggagaacgccttcgacccggacgtgggcaccaacgcgctcagcacatacgacctaacc
aataacaactatttctacctggacgtgcagacgcagagcgacgggaaccggttcgcggag
ctggtgctggagaagccgctggacagggagcagcaggcggtgcaccgctacgtgctcacc
gccatggacggagggatcccgcagcggaccgggacggcgctgctggtcgtcaaagttctg
gactcgaacgacaacgcgcccacgttcgagcagtcggtgtacgcggtgaacctgcgggag
aactcgcccgtgggcacgctggtcatccagctcaacgccacggacgtggacgagggtcag
aacggggaaatcgtgtactcgttcagcagccacaacgtgccgcggataaaggacttgttc
aacatcgacgcccggacggggaggatagaggtggccggggaggtggactacgaagagagc
agcacgcaccagatctacgtgcaggcgaaagacctgggggcgaacgcggtgcccgcgcac
tgcaaagtgctggtcaaactcgtggacgtgaacgacaacacgccggagatcagtttcagc
accgtgacggagtccgtgagcgagcaggacgcgccgggcacggtgatcgcgctcttcagc
gtctcggaccgcgactcgggcgagaacggtcagatgagctgcgagatcctgggcgacgtc
cccttcaagctcaagtcgtccttcaagaactactacaccatcgtgacggacggagcgctg
gacagggagaacacggacgcgtacaccatcaccgtggtggccaaagacaagggccagccg
tcgctcgccaccagcaagtccattaaggtgcacgtctcggatgagaacgacaacgcgccg
cgctttacgcaggcggtttacgacgtgtatgtgacagaaaacaatgtacccggggctttc
attcacgccgtgagcgctttggaccctgacataggtcagaacgcacttattacctactcc
atattggagtgtgacatacagggcatgtctgtggatacgtacgtgtccataaaccaggac
accggctacctttacgcgctgcgctcctttgattacgagcagctgaaggagttcagcttc
atggtccaggctaaggacgccggcgccgcggagctcctctccaacgccaccgttaacgtc
atcatagttgaccagaacgacaacgtgcccagcgtcatagcccccgtcggcaagaacggc
acggccaaagagcagctgccgcgctccgcggagcccggctacatggtgacgcgcatcgtg
gccatggacgcggacgacggggagaacgcgcggctgtcctacagcatcctgcggggcaac
gagatggggatgttccgcatggactggaggaccggggagctgcgcacggcccgcaggatc
tcccccaagcgggacccgcagggctactacgacctgctgatcgaggtgcgagaccacggg
cagccccccctctcctcctccgccagcgtgagcgtggtattagtggacagcgtggtcgac
gatcgcaaaggcaatcacgaatcgacgtcaaaggcgaaggagacctcccttgacctcacc
ctcattctcatcatagccctgggctccgtttcgtttatcttcctcctggccatgattgtg
ctggccgtgcgctgccaaaaggacaagaagctcaacctgtacacgtgcctgctggccggc
gactgctgcctgtgctgcggctcgtgctgcagcaggcaagctcgcggccgcaaacagaag
aagctgagcaagtcggacatcatgttagttcagagcaccaacgtgacgtcaggggtcggg
cccgtgggccaggtgcccgtggaggagtcgggcgtgggcggcgtgggcgggggcttcggc
tcccatcaccaccagaaccagaactcgtactgttaccaggtctgtctgacaccggagtcc
gccaaaacggatctgatgttcctgaagccgtgcagcccctcccgcagcaccgacgcggat
cacaccaacccctgcggcgccatagtcacgggttacagcgaccaacagccggacatcata
tccaatggcagtattctctctaatgagaccaaacaccagcgagcagagctcagctatctg
gtggacagacccagacgcgtcaacagctcggcattccaagaagcagacatcgtgagctcc
aaagacagcggtcacggtgacagcgaacagggcgacagtgaccacgacgccaccaaccgg
ggtcactcagccggggctgacctgttttcaaactgcacagaggagtgcaaggccctgggc
cactctgaccgctgctggatgcccacctttgtgccgtccgacgggcgccaggggccggac
taccgcagcaacctgcatgtccctggcatggatgccacgctgcctgacactgaggtaccc
tcctccgtcaacctctccgaccaactcaccatgacctcgtccaccgcctcgaccaatgat
aggtcattctccacctttggcaaggacggtcagaggtcacagtcacaccacagccttcac
catcacctccatcagcaacagcagcagcagttcagctccagcacgctagagaggaaagag
tatgatagggggaccctaccatacaaacccacctttctctgtgagtatcagtatgaaagt
tccctgggaccttatgactttggtctggtccagtacagatactaa
DBGET
integrated database retrieval system
