Betta splendens (Siamese fighting fish): 114854581
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Entry
114854581 CDS
T08231
Symbol
ushbp1
Name
(RefSeq) colorectal mutant cancer protein isoform X1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bspl03037
]
114854581 (ushbp1)
Cilium and associated proteins [BR:
bspl03037
]
Primary cilia and associated proteins
USH complex and associated proteins
114854581 (ushbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
Motif
Other DBs
NCBI-GeneID:
114854581
NCBI-ProteinID:
XP_029004967
UniProt:
A0A6P7MF53
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Position
4:complement(5459410..5465521)
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AA seq
698 aa
AA seq
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MEDSSRVRCDSLDARSECDKVVIDHATFDLEGSDPSASLEPSPAELAQCEAEVGTLLSII
AELNKKMGSLKAPSECDNVRSPGPARPLFPDLLSHRLVKKSPERHISTAAKPPLGDHGGS
GVWSKLQRVLSSVEDSISCRRTWASPIRATDQDKHKEHLRAAQESWVKATQILEEMETEF
GISCPPSLPKDQRLEEMLNADKQDSALRSNEQSRQEEMEKATSTITQKEEEQNKLVGVQR
SWRSSSRSPSYRSTARSLSPDWSSPSYPGSPLLHRRRARTVTPLCAGDGSALGSGHLGSP
CPSPSSISLESESERLNRYVERLKARNERLTAALERRKLESEQISITLTRLETDCSALQL
ALSYCEECEEAYGELLSLYEAKRKQGIPPQIDSAEAVGDREPPDGLSSQLRKMGTEELST
SFSTAGVTEETEIQSHTGQRTPELNDRETVLRQRIEHLKRDRAAICLPKPRPGVKGETSL
DAGHPVGSRAGHGTKDVTKPPEARKEKASVFYELISVREEMSDLRALIRLKEKELRCLEW
SLMAQRAQEAAGIFVPESVAEDLDHRAEQQRLCETTAKLCSDADTADPRTRPILKELHAI
LQREQALKKRLALVHDSLNSALSDGAAHRRDGGEHIARLTQAHSKALASYRQIRRKYREQ
VWRLEQKVAAMMGSHRRPSEAATAAGEDAEWRREETVL
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggaggattccagccgggtcagatgtgacagcctggatgctaggtcagagtgtgacaag
gtggtaattgaccatgcgacctttgacctcgagggctctgacccttcagcgagcctggag
ccttcaccagcagaactggcacagtgtgaagctgaagtggggacgctgcttagcatcatt
gctgaactgaacaagaagatggggtcactaaaggcaccaagtgaatgtgataatgtgaga
tcgccgggaccagccaggcctctgtttcctgacctgctgtcccatagactggtcaaaaaa
agcccagagagacacatttctactgctgctaaacctccactaggtgaccatgggggcagt
ggagtctggagtaaactgcagagggtcttatcatcagtggaggactccatcagctgtaga
aggacctgggcttcccccataagagccactgaccaagacaagcacaaagagcatctgaga
gcagctcaggagagctgggtcaaagccacccagattttggaggagatggagacagagttt
gggatttcatgcccaccgagcctccccaaggatcagcgcctggaggagatgctcaatgcg
gacaaacaggactctgctctcagaagcaacgagcagagtcgtcaagaggagatggagaaa
gcaacaagcaccatcactcagaaagaagaggagcaaaacaagctggtgggtgtccagcgg
tcctggaggtcaagcagccgttctccatcctaccgctccaccgctcggagcctcagtcca
gactggtcctctccttcgtaccccggctcccctttactacacaggagacgagcccggacc
gtgacacccctgtgtgctggagacggctctgcactgggctctggacacctgggcagcccg
tgtcccagccccagctccatcagcctggagtctgaatcagaacgactgaatagatacgtc
gagaggctgaaggccagaaacgaacgtctcactgcggcgctggagcgaaggaagttggag
tcggagcagatcagtatcactctgaccagactggagaccgactgctctgccctgcagttg
gccctcagctactgtgaggagtgtgaggaggcctacggtgagctactgtcgctctatgag
gccaagaggaagcaaggcattcctccacagatcgactcagcagaggcagttggtgacagg
gagccgcccgacggcctgtcatctcagctcaggaagatggggaccgaagagctgtccacc
tccttctcaacagcaggggtcacagaggagaccgaaatccagagccacacaggccagaga
acacctgagctgaacgatcgagagactgttctccggcagcgaattgagcacctaaagagg
gaccgtgctgccatttgtctgcccaagccgaggccgggggtgaagggtgaaacgagcctc
gacgcaggtcacccggttggatcaagagcgggacatgggactaaagatgtcaccaaaccc
ccggaggccaggaaggagaaggcctccgtcttctatgagctcatctccgtcagggaggag
atgtcagatcttcgcgctttaatccgcctcaaggagaaagagctgaggtgtctggagtgg
agcttgatggcgcagagggcccaagaagccgccggaattttcgtcccggaaagcgttgcc
gaggacctggatcacagagccgagcaacagaggctctgtgagaccacagctaaactgtgc
agcgacgcggacacggctgatcctcgaacaaggcccatcctgaaagagctgcacgccatc
ctgcagagagaacaagccctgaaaaagagactggcgttggtgcacgactcgctgaactcc
gctctctcggacggcgccgcccacaggagggacggcggcgagcacatcgcgaggctcacg
caggcgcacagcaaagcgctggcgtcgtaccggcagatccgccggaagtaccgggagcag
gtgtggaggctggagcagaaggtggcggccatgatggggagtcaccgcaggccgagcgag
gcggcgacggctgcgggcgaagacgcggagtggaggcgcgaagagacggttctgtga
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