Betta splendens (Siamese fighting fish): 114854602
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Entry
114854602 CDS
T08231
Symbol
frem1b
Name
(RefSeq) FRAS1-related extracellular matrix protein 1b
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114854602 (frem1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
bspl04091
]
114854602 (frem1b)
Lectins [BR:
bspl04091
]
C-Type lectins
Lecticans
114854602 (frem1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Calx-beta
Motif
Other DBs
NCBI-GeneID:
114854602
NCBI-ProteinID:
XP_029005008
UniProt:
A0A6P7MF90
LinkDB
All DBs
Position
4:complement(621699..641301)
Genome browser
AA seq
2108 aa
AA seq
DB search
MAAVWVLLVPLLMTGAVCNGLVVVNSGVEVIRGHSVFVTEKELKITVEPAEDCKVEVMTE
AVAQRVGRLTPQAFDCSFLQDEVKYVHNGSPLLAEDTVALRVYRFSPSVTLVQTVVLSVR
VVGPDTGVAQMGSAPLVVPQFYALSNAIDGSILRINTSPDLVCTVRLISAETGFPALGRL
VKDSTQRKGRETTALCPGNKPCPHDTVEVQSFKSSCQDFLSAGLKYQHLSPPSPEVDYIP
IRVELREQNTRALLESEAVWLPVMIQGALQNQLPRAALMASFILEVDQFILTPLTTATLD
AEDQETPQEGLVFNITAPPAEGFLTHLDDHTKPIGSFTWLDLHEMKVAYQPPSSSQAQRR
NYEVQFQVIDGFFMTGPSIVVHISIRAAETRAPRVSWNMGLDLLEGQSRHITWEELQIVD
SDDLDAVYLVAVDGPEHGRLSVRGAKAFMFRVWDLKDGAVAYHHSDSDTTRDHIVFRISD
GRHSIRHKFPVNILPKDDSPPFLINNVAVEVQEGGSVRLEDYMLLASDLDSSDDFILYQL
VSVPRAGQLLRKTSPHGTGVSVDRFLQSDLIQGQIYYRHSGEEQFEDSLDFTLSDSHQPP
NLSQTYTLVLHVFPVKDQLPVQVPGCVLSLSVKETDVVYITQAHLHFIDNEHPHSDLTYV
VTQPCFSPLHPGLMDAGRLFYTDGTNGMKKDHMVPELKSFTQHAVNHRKVAFMPPVEDIG
PEQLFVQFVFSVVDHHGGSVSGLLFNITVTPVDDQKPEAFTNLLRVEEGGGAFITEDHLL
VRDQDSWEEVLRVEVQRTPAHGRLELQGRTLLQGDAFTLQDLRGLRLRLIHDDSETTEDE
VGLKVTDGVNSADVILSIQVLPMNDEPPQLREGLRGEVGCEEGGQVQLTVDYLLATDRDS
DDSRLTYMLARSPGRGELQRSGLSVDKFSQKDLLQGLIFYVHTGGEIGPDPVFDTVTLII
SDGEAGGTDGCCHGDAPPPPVPLHGMLPVYDLNITVSPVNNKVPSVVVREPILVVDEGSW
ACLCAGVLGALDQDSPPDQLTFHIEIPPLRGFLENTLPAPGSEKSNAGVRVESFSLIHLM
SGFINYVQSEHSGTEPTADQLSVSVSDGVHHSAPVAFHILINPTNDEPPTLQFANFTVTE
GGMRKLTPTFLSASDLDAPPDPLTFTVVQPPAHGCLVNSFYGHYKEPDLLHRSLLITSFT
LQELLQGLIVYMHDDTETLKDAVTLRLTDGVYTVQATAQVTVVQVNDEKPRLLKNAGLEV
DAGERGLISSLVLEAADPDTPPHQVHYIISAVPRFGKLQLKMRTGWTELTSGQNFTQEDV
DMNRVWYKHSAAAISSSFKGHDSFRFSLSDLDNETPAQSFFISVHSVPKGDIVLLIRAVH
LREGERVVLNTDILLASDSASGPEQLIFTVSAPPRRGLLHAVQQPGVALSSFTQLDVAAH
RLCYSHDNSHSTDTDSFSFVVSNGDSSHSGTLHFSIQHGDRIPPTLDINTGLQLQGGSTE
AITAKNLQLTDPDTAAANLSFVVTQPPRYGKLLLRGLPLTPSLRFTQLDLDGLDLAYQHD
LGSPAKIDTFYFLPSDGSNRGYLEFGQLRDEPAVFTIQVLRVDRMPPSLCTRHSPSTVVD
VGGGRYGIFITDKHLQACDPDSPTEELQYSISRSPHFGFLENSLTGAYIQGRFTQRDVDQ
RAVVFVIPADVGVMADSFQFLLTDPAGNAMLPEILELSWSRVEFSATCYRTCETAGTLQI
QVQRSGRSSDPAYVAIQVEEGSAKPGRDFTHSTGSLIQFDPGVTMKTWSIYPIDDGLEEN
HEAFIITLKNPRNAILGHRTSASVEIMDPRGGRCDPDGMRVDKQPPPPLPVLPHPPRLEE
EVGPVTDIEAELLWETPTHPSRGDVPDRRPYLDYGAGEPQDQAAPGHRHTHYSRQLPETG
STGSRQAELKLRLPADEREWTFHSLSPLRLEELHPGDAGWSFPQDAPQVDPSPRHQRKSG
KSISSSCPNSWTHRRTRCYFLNPSVASWASADRTCSLLFNSSLASVGSRKDMAWLWRFAG
RKAFWTGTPGGPGWMQAGPRVRGPPLGSRGSKQRPQCVLVQSPRSWISTSCSAETQHGFI
CSSPAQHH
NT seq
6327 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgtctgggtcctattggtgccgctcctgatgactggggctgtttgcaatggg
ctggttgtggtgaactcaggtgtggaggtcatcaggggtcactctgtgtttgtcacagag
aaggagctgaagatcactgtggagccagctgaggactgtaaggtggaggtgatgactgaa
gccgtggctcagagggtggggaggctgacaccgcaggcgtttgactgcagcttcctgcag
gacgaagtgaagtacgtccacaacggcagccctctactcgctgaggacacggtggcgctg
agggtctacaggttctcaccttcagtcacactggtgcagacagtggttctgtctgtgcgg
gtggtggggcctgacaccggtgtggcacagatgggcagcgctccgctagtggttccacag
ttctacgctctgtccaacgccattgatggctccatcctgagaatcaacaccagtccggac
ctggtctgcacagtcagactgatcagcgccgagaccggtttcccggctctgggtcggctg
gtgaaagattctacccaaaggaagggcagagagaccacagcgctctgtcctggaaacaaa
ccgtgtcctcacgacactgtagaagttcaatcctttaaaagcagctgccaggacttcctg
agtgccggcctgaagtaccagcaccttagccctccgtctccagaggtcgactacatcccc
atcagggtggagctgagggagcagaacaccagggccttgttggagtcagaggctgtgtgg
ttgccagttatgatccaaggtgcgctgcagaaccagctgccccgagctgcactcatggcc
tccttcatcctggaggtggaccagttcattctcacgcctctgaccacggccaccctggac
gccgaggaccaggagacaccgcaggagggtctggtctttaacatcaccgctccacctgct
gaaggcttcctcacccacctagacgaccacaccaagcccattggctccttcacctggctg
gatctgcacgagatgaaggtggcctaccagccgcccagcagcagccaggcgcagcgaagg
aactacgaggtgcagttccaggtgatagacggtttcttcatgactggcccgtccatagtg
gtccacatctccatcagggcagctgagaccagggcacccagagtctcctggaacatgggt
ctggacctgttggagggtcagtctcgacacatcacctgggaggagctgcagatagtcgac
agcgacgacctggacgccgtctacctggtggcagtggatgggcctgaacacggacgtctc
agtgtgagaggtgcgaaggccttcatgttccgtgtgtgggacctgaaagatggggcggtc
gcctaccatcactcggacagcgacaccactcgcgaccatatcgtcttccgcatcagtgac
gggcgtcacagcatccgacacaagttccctgttaacatcctgcccaaagacgactccccg
ccgttcctcatcaacaacgtggcagtggaggtgcaggagggtgggtctgtgcgtctggag
gactacatgctgctggcctctgacctggactccagcgatgacttcatcctctaccaacta
gtctccgtccccagggcggggcagctgctcaggaagacgtcgccccacggaacaggagtt
tctgtggatcgtttcctgcagagcgatctgatccagggtcagatctattaccggcactcg
ggagaggagcagttcgaagactctttggacttcacgctgtccgacagccaccagccacca
aacctgtcccagacttatacgctggtgctccatgttttcccagtgaaggatcagctgccg
gttcaagtccccggctgcgttctctccctgtctgtaaaggagacggacgtggtctacatc
acccaggctcacctccacttcatagacaacgagcatccacacagtgacctgacctacgtc
gtcacccagccctgctttagcccactgcatcctgggctgatggacgctggacgcctgttt
tacacagacggcaccaacggcatgaagaaagaccacatggtgccagagctgaagtccttc
actcagcatgcggtgaaccacaggaaggtggccttcatgcctccagtggaggacattggc
ccagagcagctctttgtccagtttgtcttctctgttgtcgaccaccacggtggcagcgtc
tctggcctcctcttcaacatcaccgtcaccccagtggacgaccagaagccagaggccttc
accaacctgctgcgggtggaggagggcggaggggctttcatcacagaggaccacctcctg
gttcgggaccaggacagctgggaggaggtgctgagggtggaggtccagaggacgcctgct
catggccgcctggagctgcagggcaggactctgctgcagggagacgccttcaccttgcag
gatctgagaggcctccggctgagactcattcacgatgactcagagaccacagaggacgaa
gtcgggctgaaggtgaccgatggtgtaaactcagctgatgtcatcttgtcgatacaggtg
ctgcccatgaatgatgagcctccacagctacgagaaggtctccggggggaggtgggctgt
gaagagggaggccaggtccagctgacggtggactacctgttggctacagacagagacagt
gatgactccaggctcacctacatgctggcccgaagtcctggcagaggagagctgcagaga
tctgggttgagcgtggacaaattctctcagaaggacctgctgcagggactcatcttctat
gtccacacaggaggtgaaatcgggcctgatcctgtgtttgacactgtcactctcatcatt
tctgacggtgaggctggtggcaccgatggctgttgccatggagacgcccctccaccaccc
gtccccctgcatggcatgcttccagtttatgaccttaatatcaccgtttcaccagtcaac
aacaaagtgccctccgtcgttgtgcgtgaacccatattggtggtggacgagggctcctgg
gcctgtctgtgtgcgggggttctgggggccttggaccaggacagtccccctgaccagctg
accttccacattgagataccgccactgcgcgggttcctggagaacactcttccggcacct
gggtctgaaaagagcaacgctggtgtccgagtggaatcctttagtctcatccacctgatg
tcaggcttcatcaactacgtccagtcagagcacagtgggacggagccaactgctgaccag
ctgtctgtcagtgtgagtgacggcgtgcaccactctgcccccgtcgccttccacatcctc
attaacccgaccaatgacgaaccgccgactttgcagttcgccaacttcaccgtgacagag
ggtgggatgaggaaactgactccaaccttcctgagcgcctcagacctggacgcccctcct
gacccgctgaccttcacggtggtgcagcctccagcccatggctgcctggtgaacagcttc
tatggccactacaaggaaccagacctcctgcacaggagcctcctcatcacctccttcact
ctgcaggagctcttacaaggcttaattgtgtacatgcacgatgacacagaaaccctgaag
gatgctgtgactctgcggctgacagacggcgtctacacagttcaggcaacggctcaggtc
accgtggtgcaggtcaacgacgagaaaccgaggctgctcaagaatgctgggctggaggtg
gatgctggggagcgcgggctcatctccagcctggttctggaggccgcggacccggacacg
ccccctcaccaggtccactacatcatcagcgccgtgccgcgctttggcaaactgcagctg
aagatgcggacaggttggactgaactgacgtcgggtcagaacttcactcaggaagacgtg
gacatgaaccgtgtgtggtacaaacacagcgccgccgctatcagctccagcttcaaaggt
cacgacagctttcgcttcagcctgagcgacctggacaatgagactccagcgcagagcttc
ttcatctccgtccacagcgtgcccaaaggtgacattgtgctgctgatcagggcagtgcat
ctgagggaaggtgagcgggtggtgctgaacacagacatcctgctggcgtccgactcggcc
agtggcccagagcagctgatcttcacggtctcggcccctcctcgacgcggcctccttcac
gccgtccagcagcctggagtggctctgagcagcttcacgcagctggacgtggcggctcac
aggctgtgctacagccacgacaacagccacagcacagacacagactcgttcagttttgtc
gtcagcaacggcgactcgtctcacagcggcaccctccacttcagcatccagcatggtgac
cgcatccctcccaccctggacatcaacacgggcctacagctgcagggcgggtctacggaa
gccattacggccaaaaacctacagctcactgaccccgacacggctgcagccaacctgagc
tttgtggtcacacagccgcctcgctatgggaagctgctgctgagagggctcccactgaca
ccgtcactgagattcacccagctggacctggacgggctggacctggcctaccagcatgac
ctgggcagcccagcaaagattgacacgttctactttctgccgagcgacgggagcaacaga
ggatacctagaatttggacagttgcgagatgagcctgcagtgtttaccatccaggtgctt
cgcgtggaccggatgcctcccagcctgtgcaccaggcacagtcccagcacggtggtggat
gtgggcggtgggcgttacggcatcttcatcaccgacaagcaccttcaggcgtgcgacccc
gacagccccacagaggagctgcagtactccatcagcaggagtccacacttcggtttcctg
gagaactcgctgacaggcgcctacatccagggtcgattcacgcagcgagacgtggatcag
cgcgccgtggtgtttgtcatccctgcagacgtgggggtgatggctgacagcttccagttc
ctcctcacagacccagcaggaaacgccatgctgccggaaatactggagctgtcctggtct
cgggtggagttttcagcgacctgctacagaacctgtgagacagctgggaccctgcagatc
caggtccagcgcagtgggaggagctcggacccagcctacgtggccatccaggtggaggaa
ggatcagccaaacccggcagagatttcacccacagcacaggcagtctgatccagtttgac
ccaggcgtcaccatgaaaacttggagcatttatccgatagacgatggtttggaggaaaat
cacgaggcctttataatcaccctgaaaaatccgagaaatgccatcctgggacacaggacc
tcagctagtgttgagatcatggatcccagaggaggaaggtgcgacccagatggcatgagg
gtggacaagcagcctccccctccccttcctgtcctgccccacccccccaggctggaggag
gaggtgggccctgttaccgacatcgaggcggagctgctgtgggagaccccgactcaccct
tccagaggagacgtcccggatcgccgaccttacttggactacggagcaggggaaccacag
gatcaggcagcgccaggccaccgtcacacccactacagcagacagctgccagagactggg
agcactgggagcagacaagcagaactaaagctgcggctgccagcagacgagcgcgagtgg
acgtttcacagtctgagtccgctccggctggaggagctgcatccaggtgatgccgggtgg
agcttcccgcaggacgcacctcaggtggatccgtcacccagacaccagcgcaagagcgga
aagtcaatcagcagctcgtgtcccaacagttggactcatcgccggacacgctgttacttc
ctcaacccgtctgtagccagctgggccagcgccgacagaacctgctctctgctgttcaac
agcagcctggccagcgtgggctccaggaaagacatggcctggctgtggaggtttgctggg
aggaaagcgttttggaccggaacgcctggaggcccagggtggatgcaggctggtcccaga
gtgagggggcccccgctcggcagcaggggatccaagcagagaccccagtgtgtcctggtt
caaagccccagaagctggatttcaaccagctgctcggctgaaactcagcacgggttcatc
tgctcgtctccagctcagcatcactga
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