Betta splendens (Siamese fighting fish): 114854624
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Entry
114854624 CDS
T08231
Symbol
fip1l1a
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114854624 (fip1l1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114854624 (fip1l1a)
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
114854624 (fip1l1a)
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GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
114854624
NCBI-ProteinID:
XP_029005054
UniProt:
A0A6P7MGG6
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Position
4:complement(27743402..27756848)
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AA seq
377 aa
AA seq
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MYSESRSKVVAQVDEEEKIYQFIYGMYTRRDREVEESLNTQPPPSISSEDSPVYVKNIAE
RRFHPVVRNTKGPSMDALDDDQEMPVEIVKSTEEKPWRESGADISDYFNYGFDEESWETY
CKKQTNLCAAHAKLTVQKGQSKHEENGLCWAIAPSDWPSRESSPGVRHRSGRMGHQRLGD
KGNNTQVIAETSSIEHRSTSSSVRCLMYVPSPSFLCQRRHRPHSSVSTLNTKQAEESPKL
SSSVSQVARTVTSSAAVTYTDKGRRSRAHGHNQTSKRGREGQVWSGSSRRRGDKQTSHRE
TRKPGHRHRFKERRRGDSRGKEERHRKTKRKGQGWQLPHSSPSRSEIKSRGGDGEDKSEQ
TRSRNTKRRGKGQRESR
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtattcggagtcacgctcaaaggttgttgctcaggttgacgaggaagaaaagatttat
cagttcatttatggcatgtacaccagacgtgacagggaagtggaggaaagtttaaacact
caacccccacccagtatcagctctgaggactcccctgtgtatgtgaaaaatatcgcggaa
aggaggtttcatccagttgttagaaacacaaaggggccaagcatggatgcattggacgat
gaccaagaaatgccagttgagatagttaaatcaacagaagaaaagccctggagggaatct
ggtgctgacatctcggattactttaactatggatttgatgaggaaagctgggaaacctac
tgtaagaaacagacaaacctctgtgcagctcatgcgaaactgacggtccaaaaggggcaa
agcaaacatgaagaaaatgggctctgttgggctattgctccttccgactggccatctagg
gagtcaagccctggagtgcggcacagatccggcagaatggggcaccagcgtttgggtgat
aaaggaaacaacacacaggtgattgccgagacatcctctatagaacatagaagtacttca
tccagtgtgaggtgtctcatgtatgtcccttcaccgtctttcctttgccaacgacgacac
cgtcctcattcctcagtttctactttaaacactaaacaggctgaagaatcaccaaaacta
tcttcatcggtctctcaggttgcaaggactgtgacctccagtgctgcagtgacatacaca
gacaaaggcagaagatctagagcgcatggtcataaccaaactagtaaaagaggcagagaa
ggacaagtgtggagcggctcttcacgacgcagaggagacaagcaaacgagtcacagggag
actaggaagccagggcacaggcatcgttttaaggagaggaggagaggagacagcagggga
aaggaggaaaggcaccgaaagacgaagcgtaagggccaaggatggcaattaccacacagc
agccctagcaggagcgagatcaaaagtagggggggtgatggtgaggacaagtcagaacag
acgcgatcgcgaaataccaagagacgcggaaaagggcaaagagagagcagataa
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