Betta splendens (Siamese fighting fish): 114854757
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Entry
114854757 CDS
T08231
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bspl04131
]
114854757 (hps3)
Membrane trafficking [BR:
bspl04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
114854757 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_N
HPS3_C
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
114854757
NCBI-ProteinID:
XP_055364586
UniProt:
A0A9W2XRD2
LinkDB
All DBs
Position
4:complement(2772619..2788619)
Genome browser
AA seq
1578 aa
AA seq
DB search
MNLPRITEKGVESRVVSSLKHTGSGTNRLSMVHVYNCHPFASQQIVQVEQEPGLVCCGGG
ALFVVATGGCKVEAYSLEQGCPLLCRFATMGTVRSIQHSRIGDYLVTIEEKNSATYLRAY
TNWRFQAEEKARVGVRLLGHLLRGASVRGGVQMEIIEIPLSERPLAVACCSVTGDLLVGC
ENTLVLFTLKRQNQQNLQNQSQQNLQGSWPNTQQSSSQTPSALDFERSIILHLPKMTPKQ
VALCGGYVAVQAELEVLVLKLDAATEPVALEELTDSDTFADHLEDQTDFLLIPKHQELLG
DRAKDCDIPVCIEKTGLEDRRQSVLSYVLFRRFSPEFFQGCSVQETQLHSLQLYPLFTRN
QSVSLEEPACVFCFFSLPSAGYLYSLKGGVELLSTYQYPEKVLEAVLTDHLLHVITKSAL
QCFTVRCAAVAARLEDPYIDTTMKACPPCSLEVCALRMQLFISPARSAVAGSGGEGPRRV
RLLGHLLRGASVRGGVQMEIIEIPLSERLFAVACCSVTGDLLVGCENTLVLFTLKRQNQQ
NLQNQKNHRKRGGVQSCINPSSTQAAELTGLSMVHVYNCHPFASQQIVQVEQEPGLVCCG
GGALFVVATGGCKVEAYSLEQGCPLLCRFATMGTVRSIQHSRIGDYLVTIEEKNSATYLR
AYTNWRFQAEEKARVGVRLLGHLLRGASVRGGVQMEIIEIPLSERPLAVACCSVTGDLLV
GCENTLVLFTLKRQNQQNLQNQSQQNLQGSWPNTQQSSSQTPSALDFERSIILHLPKMTP
KQVALCGGYVAVQAELEVLVLKLDAATEPVALEELTDSDTFADHLEDQTDFLLIPKHQEL
LGDRAKDCDIPVCIEKTGLEDRRQSVLSYVLFRRFSPEFFQGCSVQETQLHSLQLYPLFT
RNQSVSLEEPACVFCFFSLPSAGYLYSLKGGVELLSTYQYPEKVLEAVLTDHLLHVITKS
ALQCFTVRCAAVAARLEDPYIDTTMKACPPCSLEVCALRMQLFIGLRSVCVHGRHVVLLS
AADTETPEEPERTTQRRGLSRRFTGSSPKESSAAGHGWNLYVVETVSPLALYQEMVEYSQ
RYAETNPQAQSLRHLLSEAHLLLRASLLQQSTECPQADREVLEDAFRHNCAQLGDCFSRG
SQRDCHLALPYYRMSGLSVPEILSRNRPLPSNPHFYGPGFLFYLKHHLLEEMEQNLTQES
ADEVIDIFSQSEPSELVHVCASPSMINVSPARTLQILQHLEDSTGVSVPLTITMATMMLR
MGNMQQYTQLMERHAEMLLIYGFIEEPRLLLHGGGGGRHAHIRPTALTQQLVKTQPGLLV
ASMVALHENSKVQLEQADHIFQELGCENCLQVDFWEATLMASSQEAVIQELLFRVASVYI
ERLTNTNSEGASKRRSLKSAEDLVNSCPHYGPLYLWLSVLSPPHTTSPQHLEALHKLQSL
LCGPSLSVSSVAPLLERVTEDTLWGFSLHLLCFTRRGQYDISIEKVLDRCPQAIVPYANY
QLQDKNMALWWQKLLPELCSRTRAAPHNSILLAALKETLVMVAAEMSPAELLELIPDDGT
ASYFLPYLLTCSQKHLVA
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttccaagaatcacagaaaaaggggtggagtccagagttgtatcatccctcaag
cacacaggcagcggaactaacaggctcagcatggtgcacgtctacaactgtcatcccttc
gcctcacaacagatagtacaagtggagcaggagcctggcttggtctgctgtggaggtgga
gcgctgtttgttgtggctactggaggatgcaaggtggaagcctacagtctggagcagggc
tgccctctcctctgtcgtttcgccaccatgggcacggtgaggagcatccagcacagcagg
ataggagattacctggtcaccattgaggaaaagaacagcgctacctacctgcgagcctac
accaactggcgctttcaggcggaggagaaggcccgcgtcggggtgcgcttgctggggcac
ctgctgcggggggcgtctgtgcggggcggggtgcagatggagatcatcgagatccctctg
tccgagcgccctcttgctgtggcctgttgctcagtcacaggagaccttctggtcggctgt
gagaacacgctggttctgtttacactgaagcggcagaaccagcagaacctgcagaaccag
agtcagcaaaaccttcagggctcttggccgaacacccagcaaagctccagtcagaccccg
tccgctttggactttgagcgctccatcattctgcatcttccaaagatgacacctaaacag
gtggcgctgtgtggaggatatgtagccgtgcaggcagagctggaggtgctcgtactaaag
ctggatgcagccactgaacctgtggcgctggaggaattaacagactcagatacttttgct
gatcaccttgaagaccagaccgacttcctactcatcccaaaacatcaggagttgctcggt
gatcgagcaaaagactgtgacatccctgtctgcattgaaaagactggactggaggacaga
aggcagagcgtgctgtcctacgttctcttcaggcgctttagtccagagttctttcagggc
tgcagtgtgcaagagactcagctgcactcgctgcagctctacccgctgttcaccagaaac
cagtcagtgtctctggaggaaccggcctgtgtgttttgtttcttctccctcccctctgct
ggatacctgtacagcctgaagggcggagtggagctgctctcaacctatcagtatccagag
aaggtcctggaggcggtgctgacggatcacctgttgcacgttataaccaagagtgcgttg
cagtgtttcacagttcgctgtgcagccgtagcagcgaggcttgaagacccgtacatcgac
acaaccatgaaggcctgtccgccgtgcagcctcgaggtgtgcgccctcagaatgcagctg
ttcatatcgcctgcgcgctctgctgttgctggcagcggaggagaaggcccgcgtcgggtg
cgcttgctggggcacctgctgcggggggcgtctgtgcggggcggggtgcagatggagatc
atcgagatccctctgtccgagcgcctctttgctgtggcctgttgctcagtcacaggagac
cttctggtcggctgtgagaacacgctggttctgtttacactgaagcggcagaaccagcag
aacctgcagaaccagaagaatcacagaaaaaggggtggagtccagagttgtatcaatccc
tcaagcacacaggcagcggaactaacaggactcagcatggtgcacgtctacaactgtcat
cccttcgcctcacaacagatagtacaagtggagcaggagcctggcttggtctgctgtgga
ggtggagcgctgtttgttgtggctactggaggatgcaaggtggaagcctacagtctggag
cagggctgccctctcctctgtcgtttcgccaccatgggcacggtgaggagcatccagcac
agcaggataggagattacctggtcaccattgaggaaaagaacagcgctacctacctgcga
gcctacaccaactggcgctttcaggcggaggagaaggcccgcgtcggggtgcgcttgctg
gggcacctgctgcggggggcgtctgtgcggggcggggtgcagatggagatcatcgagatc
cctctgtccgagcgccctcttgctgtggcctgttgctcagtcacaggagaccttctggtc
ggctgtgagaacacgctggttctgtttacactgaagcggcagaaccagcagaacctgcag
aaccagagtcagcaaaaccttcagggctcttggccgaacacccagcaaagctccagtcag
accccgtccgctttggactttgagcgctccatcattctgcatcttccaaagatgacacct
aaacaggtggcgctgtgtggaggatatgtagccgtgcaggcagagctggaggtgctcgta
ctaaagctggatgcagccactgaacctgtggcgctggaggaattaacagactcagatact
tttgctgatcaccttgaagaccagaccgacttcctactcatcccaaaacatcaggagttg
ctcggtgatcgagcaaaagactgtgacatccctgtctgcattgaaaagactggactggag
gacagaaggcagagcgtgctgtcctacgttctcttcaggcgctttagtccagagttcttt
cagggctgcagtgtgcaagagactcagctgcactcgctgcagctctacccgctgttcacc
agaaaccagtcagtgtctctggaggaaccggcctgtgtgttttgtttcttctccctcccc
tctgctggatacctgtacagcctgaagggcggagtggagctgctctcaacctatcagtat
ccagagaaggtcctggaggcggtgctgacggatcacctgttgcacgttataaccaagagt
gcgttgcagtgtttcacagttcgctgtgcagccgtagcagcgaggcttgaagacccgtac
atcgacacaaccatgaaggcctgtccgccgtgcagcctcgaggtgtgcgccctcagaatg
cagctgttcatcggcctgcggtcagtgtgcgtccacggccgtcacgttgtcctcctctct
gcagccgacacagagacgccggaggagcctgaacgcaccacgcagcgcaggggcctgagc
aggaggttcacggggtcctcccccaaagaaagcagtgcagccggacatggatggaacctg
tacgtggtcgagaccgtctcgcccctcgcgctctaccaggagatggtcgaatacagtcag
cgctacgcagagaccaatccacaggcccaaagccttcgccacctcctcagcgaagctcac
ctcctcctccgagcctcgctgctgcagcagagcactgagtgtccacaagcagacagggag
gtgctggaggatgcgttcaggcacaactgtgctcagctaggagactgcttcagcaggggc
agccagagggactgccacctggctctgccgtactacaggatgtctggcttgtcagttcca
gagatcttatctaggaaccgcccacttcccagcaaccctcacttttatggccctggcttc
ctgttctatctgaaacatcacctgttagaagaaatggaacagaatctcactcaggaatcc
gcagatgaggtcattgacattttcagccaatcagagccttctgagcttgtccacgtctgc
gccagtccgtccatgattaacgtcagtcctgcacgaactctgcaaattctacaacatctg
gaggactcgaccggcgtgtcggttcctctgacaatcaccatggcaaccatgatgcttcgt
atgggcaacatgcagcagtacacacagctgatggagagacacgctgagatgctgctgatt
tacgggttcatcgaggagccgaggctgctccttcacggaggaggcggaggacgtcacgcg
cacattcgtcccacagccctgactcaacagctggtgaagacgcagccgggacttctggtg
gcgtccatggtggctctgcacgagaacagcaaagttcagctggaacaggccgatcacata
ttccaggagctgggctgtgagaactgcctgcaggtggacttctgggaggcgactctcatg
gcgtcgtcgcaggaagctgtcatccaggaactcctgttccgagtggcatcggtttatatc
gagcggctgacgaatacaaactcggagggagcctcgaaacgcaggtcactgaagagcgcg
gaggatctggtcaactcgtgcccccattatggacctttgtacctgtggctctccgtcctc
agtccacctcacacaaccagccctcagcacctggaggcgctacacaaactgcagtctctc
ctatgtggtccgtccctctccgtgagctctgtcgctcccctgctggaacgcgtgacggag
gacaccttatggggcttcagcctgcacctcctctgcttcaccagaagagggcagtacgac
atcagcattgagaaggtgctggaccggtgtcctcaggccatcgtaccctacgccaattac
cagttacaagacaaaaacatggcgttgtggtggcagaagctgctcccagagctttgtagt
cgcaccagagctgcacctcataacagcatcctattggctgctctaaaggagactctggtc
atggttgccgcggagatgagccctgcagagctgttggaactgattcccgatgacggcacg
gcctcatacttcctgccttaccttctgacatgtagccagaaacacctggtggcctga
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integrated database retrieval system
