Betta splendens (Siamese fighting fish): 114855198
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Entry
114855198 CDS
T08231
Symbol
ddx27
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bspl03041
]
114855198 (ddx27)
03009 Ribosome biogenesis [BR:
bspl03009
]
114855198 (ddx27)
Enzymes [BR:
bspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114855198 (ddx27)
Spliceosome [BR:
bspl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114855198 (ddx27)
Ribosome biogenesis [BR:
bspl03009
]
Eukaryotic type
Pre-60S particles
Helicases
114855198 (ddx27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
SNF2-rel_dom
FerA
Motif
Other DBs
NCBI-GeneID:
114855198
NCBI-ProteinID:
XP_029005965
UniProt:
A0A6P7MHL3
LinkDB
All DBs
Position
5:20496185..20503217
Genome browser
AA seq
750 aa
AA seq
DB search
MFEQLGLIRTMQDDDQSPEEPDSESDQEEEKVILNRKKKLKNSASKDFNCAFEFGERDIL
DDDSDWLMADVLKQLKNKRTLTTLDQKIEKIRKKRKTEEQGKAGEGSAEKNQEDVDLKPA
ADGDDESNEEDEEQEFDSNDEQVLTKVDTLREKGRRGRKRKVEEEVVEAFYEDASQYNDQ
LTFHDMNLSRPILKAITALGFKQPTPIQKACVPMGLLGRDLCACAATGTGKTAAFMLPVL
ERLVYKPRTSQVTRVLVLVPTRELGIQVHSVARQLAQFTSVTTCLAVGGLDLKSQEAALR
AGPDVLIATPGRLIDHLHNTPSFELSRIEILILDEADRMLDEYFEEQMKEIIRLCSYNRQ
TMLFSATMTEEVKDLAAVSLKQPVRIFINSNTDVAPFLRQEFVRIRPNREGDREAVVAAL
LTRTFQDHVMLFTQTRKQAHRLHILLGLMGLKVGELHGELSQNQRLENLRRFKDEQIDVL
VATDVAARGLDIDGVKTVINFTMPSTVKHYVHRVGRTARACRSGRSVSLVGESERKILKE
VVKSAKTSVKARVLPPEVILKFRDLISKLEKDVEAVMTLEREEKELAISEAKLSVAQKRL
DGVDSQSQRVWFQTQQERKQNRISKALQDFDLALRGKKKRAKFMKDGRKKELTSEERAQF
ELLKAQMFAERAAKRERRHKRARAMPEDNGPSSAANRKTGKXGRKSVFDKELTNTSSKAL
KHYRAGPSFADRKQLGLDRKRSGGSRFKKK
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacagcttggtttgatccgaacgatgcaggatgatgaccagagcccggaggaa
ccggacagtgagtccgatcaggaggaggagaaggtcattctcaacaggaagaagaagctc
aagaattcagcatcaaaagactttaattgtgcctttgaatttggagagagagacatactg
gatgatgatagtgactggttgatggccgatgtcctcaaacagctcaagaacaagagaacc
ctgacaacactggaccagaaaatagaaaaaatcagaaagaagaggaaaactgaggaacag
ggcaaagctggtgaaggatctgcagagaagaaccaggaggatgttgatttgaaacctgct
gctgatggtgatgatgaaagtaatgaagaggatgaagagcaagaatttgactcaaatgat
gaacaggttcttactaaagtggacactctccgagaaaaaggacgacgggggaggaagagg
aaggtggaggaggaggttgtagaagctttttatgaggacgcatctcagtacaatgatcag
ttgacgttccatgacatgaacctgtctagacccatcctgaaggccatcacagctctgggc
ttcaagcagccaactcccatacagaaggcctgtgttcctatgggtctgttgggcagagac
ctgtgtgcctgtgctgctactggaacagggaagactgcagccttcatgctgccagtgctg
gagcgtttggtttataaacctaggacctcccaggtgactcgtgtcctggttcttgttccc
accagagagctggggatccaggttcactctgtggctcgacaacttgctcagtttacttca
gtcacaacctgcctggctgttggtgggctggatttgaagtcacaggaagcagctttgagg
gcaggtcctgacgttctgattgctacacctggtcgtctgatcgatcacctacacaacaca
ccaagcttcgagctgtctcgcattgagatcctgattctggatgaggccgataggatgttg
gacgagtactttgaggaacagatgaaggaaatcattagactgtgttcttacaacagacaa
accatgttgttctcagccaccatgacagaagaggtaaaggacctggctgctgtgtcgctg
aagcaaccagtcaggattttcattaatagcaatactgatgttgcccccttcctgcgtcag
gagtttgtcagaattcgaccaaacagagaaggtgatcgggaggctgtggtagctgctctg
ctgactcggacctttcaagatcatgtgatgttgttcactcagacaagaaagcaggcacac
agactgcacatactgctgggtttaatgggccttaaagttggtgaactacacggagaactg
agccagaaccagagactggagaacctcaggcgttttaaagatgaacagattgatgtcttg
gtggcgaccgatgtggcagccagaggacttgacattgacggagtcaaaacggtaatcaac
tttacgatgccctctacagtcaaacactatgtccatcgcgttggccgcacagcaagagcc
tgccgctccggccgttctgtgtctctggttggagaatctgagaggaagatcttgaaggag
gtggtgaagtcggccaaaaccagtgtaaaggctcgagtcctgccaccagaggtgatcctg
aagttcagagaccttatctctaaactggaaaaagatgttgaagctgtgatgacattggag
agagaggagaaggagctggccatatctgaggccaagttgagtgtggctcagaagcgtctt
gatggggtggactctcagtcacagagagtttggtttcaaactcagcaggagagaaaacag
aatcgcatttctaaggctctacaggactttgatctggctttgagagggaagaagaaaagg
gcaaagttcatgaaggatggcagaaagaaggagctgacgtctgaggagcgtgctcagttt
gagctcttgaaggcccaaatgtttgcagagcgagcagcaaagagagagagacgacataag
agagcaagagcaatgccagaggacaatggaccgagtagtgcagctaatcggaagactgga
aaangaggcaggaagtctgtttttgataaagagctgactaacacaagcagcaaggctctg
aaacactacagagctggaccatcatttgcagacaggaagcagcttggtttggacaggaaa
cgctcaggtggatctaggtttaagaagaagtag
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integrated database retrieval system
