Betta splendens (Siamese fighting fish): 114855243
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Entry
114855243 CDS
T08231
Symbol
smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114855243 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bspl03021
]
114855243 (smarcc2)
03036 Chromosome and associated proteins [BR:
bspl03036
]
114855243 (smarcc2)
Transcription machinery [BR:
bspl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114855243 (smarcc2)
Chromosome and associated proteins [BR:
bspl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114855243 (smarcc2)
PBAF complex
114855243 (smarcc2)
GBAF(ncBAF) complex
114855243 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
114855243
NCBI-ProteinID:
XP_029006065
UniProt:
A0A6P7MHV6
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All DBs
Position
5:10010783..10021442
Genome browser
AA seq
1048 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLPMKCFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLTRPVIYLSADIEPKLLGKLKDIIKRHQGSVTEDKASSSHVVVP
IPTSLEEEEWVRPVMKRDKQVLLHWGYFPDSYDTWIPANEIEAAVEDPPTPEKPRKVHAK
WILDLDQYNEWMNEEDYEVGDGCPKRKRISAKTLTDEVTTPDERKDKKPGSAKKRKRSPS
PSPTPPPQESKKKNTKKGPATPYTKSKRGQREEEQEDLSKDLDEASPVPAAEEGNTTKTN
NTKKDTDSTPVKGGTDMDEQEDESMETTGKEEEEGSLSVKGEPVKGSDLHEDNVTEQTHH
IIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTS
TACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLVP
LQPKTSQTPATQPMMSFPDKVKDKPTDLQNFGLRTDMYSKKTGSAKSKSAASSMREWTEQ
ETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSAPSMGPLAYQPV
PFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEEAAR
VSGRQDPLYGLEGSGIAGTGLEEGDRPDESSDESKSDSQSGEEKRDSKESKDGTMEEEEK
QTENGKKEEEKGREPEGDREADKPESEMGDAEKEKEGKEGTEEGQRDGESEGERKAKVER
DVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELET
IMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQHIQHQQHSQAVGPHSSQPA
SAAPPQGLASGQQAPSTPAPQPAPSPAPPASATPESQPPQGTHTSPPCPTGQNPAAHSSS
STTSVLHEPSAPLPGETLHSSAPVPPPQ
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcggcccgaatgtaaaatatttcgaagcgtctgacacc
gtttctcagtttgataatgtccgcgtctggctgggaaagaattacaaaaagtacatccag
gctgagccccccaccaacaagtctctgtccagccttgtggtccagctgctccagttccag
gaggaggtttttggtcgacatgtcagcaaccctccgctcaccaaactcccaatgaagtgt
ttcctggacttcaagtctgggggggctctgtgccacattctagctgccgcctacaagttc
aagagtgaccaaggatggcgcaggtttgacttccagaatccatcgaggatggacagaaat
gtggagatgttcatgacaattgagaagtccttagtgcagaacaactgcctgacaagacct
gtcatctacctgagtgctgacatagaaccaaaactgcttgggaaactcaaagacatcata
aaacgacatcagggctcagtgactgaggacaaggcctccagctcccatgttgttgtaccg
atccctaccagtctggaggaagaggagtgggtgcgtccggtgatgaagagagacaaacaa
gtgctgctccactggggatatttccctgacagttatgacacctggattccagctaatgag
attgaggctgctgtagaggatcctcccaccccagagaaaccccgaaaggtccatgccaag
tggattttagacctggatcaatataatgagtggatgaatgaggaggactatgaagtggga
gacggctgccccaagagaaagaggatttcagccaagaccctgacagacgaggtgaccacg
cctgatgagcgaaaagacaaaaagcccggaagtgccaagaagagaaaacgctccccctcg
ccgtcccccacccctccacctcaggagagcaagaagaagaacaccaagaaaggaccagcg
accccatacactaagtccaaacggggccagagggaggaagaacaggaggatctcagtaaa
gacttggatgaagcatcacctgtaccagcagctgaagagggaaacacgaccaagacaaat
aataccaagaaggacacagattcaactccagtgaagggagggacagatatggatgaacag
gaagatgagtccatggaaactacaggcaaggaagaagaggaaggatctctgagtgtgaag
ggtgaaccagtaaaaggctcagacctacacgaggataatgtgactgagcaaactcatcac
atcattatcccgagctacgccgcctggtttgactacaacagcgttcacgccattgagcgc
agagccctgccagagttttttaatgggaagaacaaatccaaaacccctgagatttacttg
gcatacaggaactttatgatcgacacctaccgactcaaccctcaggagtacctgacctcc
accgcctgccgcagaaacctggcaggagatgtgtgtgccatcatgagggtccatgccttc
ctggaacagtggggtctgatcaactaccaggtggactctgagagccggcccacacccatg
ggccctccgcccacctctcacttccatgtcctggcagacactccatccagcctagtgccc
ctgcagcctaaaacatctcagacccccgctacccagccgatgatgtcattcccagataaa
gtaaaggataaaccaacagatctacaaaactttgggctgcgcacagacatgtacagcaag
aagactggttctgcaaagagcaagagtgcagcgagctcaatgagggagtggacagagcag
gaaacactactattacttgagggcttggagatgtacaaagatgactggaacaaggtgtcg
gagcacgttggcagtcgtacacaggatgagtgcatcctgcacttcctacggctgcccatc
gaagacccctatttggaggacagcgcgccgtccatgggaccactagcctatcagccagta
cctttcagccaagcaggaaaccctgtcatgagcacggtggccttcctggcctctgtagtc
gacccccgcgtggcctcagctgcagccaagtctgctctggaggagttctcacgtatgaag
gaggaggttcctgcagcccttgttgaggctcacgtgcggcgggtggaggaggcagcgaga
gttagcggccgccaggaccctctctacggcttggagggcagcggcatcgcaggcactggc
ctggaggaaggagatagacccgacgaaagcagtgatgaaagtaagagtgacagccagtca
ggtgaagagaagagagattccaaggaaagcaaagatggaacaatggaggaagaggagaag
cagacagagaatggaaagaaagaagaagagaaaggacgagaacctgaaggagatagagag
gcagacaaaccagagtcagagatgggtgatgctgagaaggagaaggaggggaaagaagga
actgaggaaggacagagagatggagaaagcgagggagaaaggaaagccaaggtggagcgt
gacgttggagaaggaaatctggccacggcggctgcatctgctctcgccgctgctgccgtc
aaagccaagcacttggctgcagtggaagagaggaagattaagtccctagtggctctattg
gtggagacgcagatgaaaaagctggaaatcaaactgcgacactttgaagaactggaaact
atcatggacagagagagggaggctctggagtaccagcggcagcagctgctggccgaccgc
cagtcgttccacatggagcagctcaaatacgccgagatgagggcccgccagcagcacttc
cagcacatccagcaccagcagcacagccaggccgtgggcccccactccagccaacccgcc
tcggcggcgccgccccagggcctggcctcgggtcagcaggcccccagcacaccagcaccg
cagcctgcccccagccccgcgccgccggcctcggccaccccagagtcccagccgcctcag
ggcactcacacctcgcccccttgccccacaggccagaacccggccgcccactccagctcc
agcactacatctgtcctccatgagcccagcgctcctctccctggggaaacgctccactcc
tcagctccagtccctcctccacagtga
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integrated database retrieval system
