Betta splendens (Siamese fighting fish): 114855265
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Entry
114855265 CDS
T08231
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bspl03036
]
114855265 (chd5)
Chromosome and associated proteins [BR:
bspl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
114855265 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
PHD_2
DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
114855265
NCBI-ProteinID:
XP_029006108
UniProt:
A0A6P7MIB6
LinkDB
All DBs
Position
5:17215743..17240128
Genome browser
AA seq
2002 aa
AA seq
DB search
MPGSLSNEDEGQDDMDFEDDMPDDDDEGERCAVPLTPLDSFFADDDALKLQKKKKPKKMK
EGKMPKVKKRKKEGAMQPRVDSDLDETSEVEEEREPLEIGSESESSMYGPTKKKKKKPKE
KKEKKPRKKKRDEDDDDDDDDDGNMKEPKSSSQLMLEWGLEDVQYGFTEDDYKTITNYKA
FSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGASATAVAAAVAAAVETVTVA
QPGSVSSSQPGSQTGPVKKAKTKEGKGPGVRKKNKTVKEVKKKPKPKKTKSKSGSSGKKK
KASSSEEDFLEESDFDDISIHSASVLSDTLGAATKKKARRGRKKRKKEDGDGYETDHQDY
CEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDEEEDEEE
AAGEEEDDHMEFCRVCKDGGELLCCDACPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLK
GKVQKILHWTWGDPPLPAELPAGPDGKPGDPLTKPPLKGHPEREFFVKWAGLSYWHCSWV
SELQLELYHTVMYRNYQRKNDMDEPPPYDYGSGEEELNSEKRKSKDPQYAVMEERFYRYG
IKPEWMVIHRILNHSFDKDGDVHYLIKWRDLPYDQCTWEVDEFDIPEYESHKAFYWDHRE
QILGEDQRPLVVRKGKKLKEDHPKREVPPDAPIIDPTIKFEHQPWYINATGGTLHPYQLE
GLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWER
EFEMWAPDFYVVTYTGDKDSRAIIRENEFTFEDSAVKSGRKVFRMKKDTPIKFHVLLTSY
ELITIDQAILGSITWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEEL
FHLLNFLTPDRFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTEL
IVRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEA
PVLPNGSYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEFEGYK
YERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLASADTVIIYDSDWNPHN
DIQAFSRAHRIGQNRKVMIYRFVTRGSVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSK
QELDDILKFGTEELFKDEMEAARTMGDNKDGEEGNVIHYDDDAISKLLDRSQDATEDTEI
QNMNEYLSSFKVAQYVVKEEDGEEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARN
LGKGKRIRKQVNYNDATQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRQSRRQL
KSEKDKPLPPLLARVGGSIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKS
EREFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHV
NGKLSSPDLIPIGMELKKLTESVSSDPNTPAPASPVATQPGTPVPPERGESLAGAAEDKE
ATEQESRRLSEQEASSAAPAPEKAADSEERRASPEDKPGDERDRAESPSAKAEPSANSKE
AALQPELPSRQPSPKTEPSRETEKASDKDSASPLTKAEDKENKPAVTDDVKSEDALEGRL
NGDKDTLDELDESRKEDKNGYKAKFMFNIADGGFTELHTLWQTEERAALSSGKMYDIWHR
RHDYWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEMHKGNYLEMKNKFLARRFKLLEQ
ALVIEEQLRRAAYLNMTQDPTHPAMALNARFAEVECLAESHQHLSKESLAGNKPANAVLH
KGLVLNQLEELLSDMKADVTRLPNMLSRIPPVSARLQMSERSILSRLTSRGGEPPPQQPF
SQGGFGCSQMYGSSFAGGFRGPGGQPMVNYSQMPLGPYVSVSANGPPPPTSHLDKKSLDS
LRDVTTPDLKSGKPTDVICIED
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtcgctgagtaatgaagacgagggacaggacgacatggattttgaagacgat
atgccagatgacgacgacgaaggcgagcgctgcgccgttcccctcacgcccctcgacagc
ttcttcgccgacgacgacgccctcaaactacagaagaagaagaagcccaaaaagatgaaa
gagggcaaaatgcccaaagtgaagaagaggaaaaaggagggggcaatgcagccaagggtt
gacagcgacctggacgagacctcggaggtggaggaggagcgggaaccgctggaaatcggg
tccgagagcgagagcagcatgtacggccccacgaagaagaagaagaagaaacccaaggag
aagaaggagaaaaagccccggaagaagaagagagatgaggacgatgatgacgacgacgac
gacgatgggaacatgaaagaacccaaatcatccagccagctgatgctggagtggggcctc
gaagacgtgcagtacggcttcactgaggacgactataaaaccatcaccaactacaaggcg
ttcagccagttcctcaggccgctcattgccaagaagaaccccaagattcccatgtccaag
atgatgacggtgttgggggccaagtggcgcgagttcagcgccaacaacccgttcaaaggc
gcgtcggccaccgccgtggccgccgccgtggccgccgccgtggagacggtcaccgtggcg
cagccggggtccgtcagcagcagccagccgggctcccagacggggccggtgaaaaaagcc
aaaaccaaagagggaaaggggccaggagtgagaaagaagaacaagactgtgaaggaggtg
aagaagaagcccaagcccaagaagaccaaatcaaagtcgggctcgagtgggaagaagaag
aaagcgtcctcgagcgaggaggacttcctggaggagtcggactttgatgacatcagcatc
cacagcgcctctgtgctttctgataccttgggggccgccaccaagaaaaaggcccggcgt
gggcggaagaagaggaaaaaggaggacggcgacggctatgagacggaccaccaggactac
tgtgaggtctgccagcaggggggggagatcatcctgtgcgacacctgccccagagcctac
cacctggtctgcctggaccccgagctggagaaggcccccgagggcaaatggagctgtcca
cactgtgagaaagagggcatccagtgggaggccaaagatgaagaggaggatgaggaggag
gccgcgggcgaggaggaggacgaccacatggagttctgccgagtctgcaaggacggaggc
gagctgctgtgctgcgacgcctgcccgtcgtcctaccacattcactgcctcaacccgccg
ctgcccgagatccccaacggggagtggctgtgcccgcgctgcatgtgtcctccgctgaaa
ggcaaagtgcaaaagattctgcactggacgtggggcgatcccccgctgcctgcagagctg
cccgcgggtcccgacggcaagcccggcgacccgctgaccaagccgccgctcaagggtcac
cctgagagggagttcttcgtcaagtgggccgggctctcctactggcactgctcctgggtc
agcgaactgcagttggagctgtatcacacggtcatgtatcggaattaccagcggaagaac
gacatggacgagccgccgccgtacgactacggctccggggaggaggagctaaacagcgag
aagaggaagagcaaagacccccagtacgccgtgatggaggagcgcttctaccgatacggc
atcaagccagagtggatggtgatccaccgcatcctcaaccacagtttcgacaaggacggg
gatgtgcattacctgatcaagtggagagacctgccctatgaccagtgcacctgggaggtg
gacgagttcgacatcccagaatatgagagtcataaagctttttactgggaccacagggag
cagattctgggggaggaccaacgccccctggtggtgcggaaagggaagaaactcaaagag
gaccatccaaagagggaggtccctcctgatgcacccatcatagatcccaccatcaagttc
gagcaccagccttggtacatcaacgccacagggggaacgctgcacccgtaccagctagag
ggtctgaactggctgaggttctcctgggctcaggggacggacaccatcctggctgatgag
atgggccttggaaagacggtgcagaccatagtgttcctgtactcgctctacaaagagggc
cactctaagggccctttcttggttagtgcccctctttccactatcatcaactgggaaagg
gagttcgagatgtgggctccggacttctacgtggtgacgtacacgggggacaaggacagc
agggccatcatcagggagaacgagttcacctttgaggacagcgcagtgaagtcagggcgg
aaggtgtttcgcatgaagaaggacacccctatcaagttccacgtgctgctgacgtcgtac
gagctgatcactatagaccaggccatcctgggctccatcacctgggcctgcctggtggta
gacgaggctcacagactgaagaacaaccagtccaagtttttcagaatcctcaatgggtat
aagatctactacaagctgctgctgactgggactcctcttcagaacaacctggaggagttg
ttccacctgcttaactttctcaccccagatcgcttcaataacctggaaggcttcctggag
gagtttgctgatatctctaaagaggaccagatcaagaagctgcacgacctgctgggccct
cacatgctccggaggctgaaagccgacgtcttcaagaatatgcctgcgaagacggagctg
attgtcagagtggagctcagccccatgcaaaagaaatattacaagtttattctgacacga
aatttcgaggcgcttaactccaaaggcggagggaaccaagtgtccctgctgaacataatg
atggacctgaagaagtgctgtaaccacccctacctgttccccgtggctgctgtggaagcc
cctgtgctgcccaacggttcttatgatggaaacctactggtcaagtcctcaggaaaactc
actctgctgcagaaaatgctgaagaaactcaaagacgaaggacacagagtcctcattttc
tctcagatgactaagatgctggacctcctggaggattttctggagtttgagggctacaaa
tacgagcgcattgatggaggaattacaggaggcctccgacaagaggccatcgaccgcttc
aatgcaccgggcgctcagcagttctgcttcctgctttccacgcgggccggaggccttggg
attaacctcgccagcgcagacaccgtcatcatctatgactcggactggaatccacacaat
gacattcaagcctttagcagagcccaccgcatcggccaaaacaggaaagtcatgatctat
cgtttcgtgactcgaggctcggtggaggagcggatcactcaggtggccaagagaaagatg
atgctgacccacctggtggtgcggcctggcttaggctccaaaaccggatccatgtccaaa
caagaattggacgacatcctcaagtttggcacggaggagcttttcaaagatgaaatggaa
gcagcgcgaaccatgggtgacaacaaagacggcgaggagggcaacgtgattcactatgac
gacgacgccatctccaagctgctggaccgcagccaggacgccaccgaagacaccgagatc
cagaacatgaacgagtacctgagctccttcaaagtggctcagtacgtggtgaaggaagag
gacggagaggaggaagtggagcgggagatcatcaagcaggaggagaacgtggacccggac
tactgggagaaactgctccgccaccactacgagcagcagcaggaggacctggctcggaac
ctgggcaaaggcaaacgcatccgcaagcaggtcaactacaacgacgccacccaggaggac
caagaatggcaggatgatctttcagacaatcagtcggagtactccgtggggtcggaggac
gaggacgaagacttcgaggagaggcctgaagggggacggagacagtctcgtcggcagctg
aagagcgagaaggacaaacctctgccgcctttgctggcacgggtcggaggcagcattgag
gtcctgggctttaacgctcgtcagaggaaggccttcctcaatgccatcatgcgctggggg
atgcctcctcaggacgccttcaactcccactggttggtccgagacctgcggggcaagagc
gagcgcgagttcagggcctacgtgtcgctcttcatgagacacctctgtgagccgggggcc
gacggagccgagaccttcgccgacggggtcccacgggaggggctgtcccggcagcacgtc
ctcaccaggattggagtcatgtccctcgtcaggaagaaggtgcaggagttcgagcacgtc
aacgggaagctgagttcccccgacctgatccccatcgggatggagctgaagaagctgacc
gagagcgtgtcctccgaccccaacacgccggcgccggccagccccgtcgccacccagccc
ggcacgccggtgccgccagagagaggcgagtccctcgcgggcgcagcggaggataaagaa
gccacggagcaggagagcaggcggctgtcagagcaggaggcgtccagcgcggcgccggca
cccgagaaggcggctgacagcgaggagcgcagggccagccccgaggacaagccgggggac
gagagggacagggccgagtcaccttccgccaaggcggagccatctgccaactccaaagag
gccgctctgcagccggagctgccgtccaggcagccgtcgcccaaaactgagcccagtaga
gagacggagaaggcgtcagacaaagactctgcttctcctctgacaaaagccgaagacaag
gagaacaagccagctgttacagacgacgtgaagagcgaagacgcattagagggtcgatta
aacggagacaaagacactctggacgagctggacgagagcaggaaggaggataaaaacgga
tacaaggccaagtttatgttcaatatcgctgatggaggttttacagagctgcacaccctg
tggcagactgaggagcgggcggcgctgtcctccgggaaaatgtacgacatctggcaccgt
cgccatgactactggctgctggccggcatcgtgacacacggctacgctcgctggcaggac
atccagaacgacccgcgttatgccatcctcaacgagcccttcaagaccgagatgcacaaa
ggcaactacctggagatgaagaacaagttcctcgctcgccgcttcaagctgctggagcag
gcgctggtgatcgaggagcagctgaggcgggccgcgtacctgaacatgacccaggacccc
actcacccggccatggcgctcaacgcccgcttcgccgaggtggagtgtctggccgagtcc
caccagcacctgtccaaagagtctctggccgggaacaagcctgccaacgccgtgctgcac
aaaggtctggtgctgaaccagctggaggagctcctgagtgacatgaaggcggacgtgacg
cggcttcccaacatgctgtccaggatcccgccggtgtcggcgcggctgcagatgtccgag
cgcagcatcctgagccgcctgaccagccgcggaggcgagcccccaccccagcagcctttc
agccagggcggcttcggctgctcccagatgtacggcagcagcttcgctgggggattcagg
ggccccgggggacagcccatggtcaactacagccagatgcctctgggcccctacgtgagc
gtgtctgcgaacgggcccccgcctcccacaagccatctggacaagaagtctctggactcc
ttgagagacgtgaccacgcctgacctcaagtctggcaaacccactgatgtcatctgtatt
gaagattag
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