Betta splendens (Siamese fighting fish): 114855557
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Entry
114855557 CDS
T08231
Symbol
stau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bspl01009
]
114855557 (stau1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114855557 (stau1)
Protein phosphatases and associated proteins [BR:
bspl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114855557 (stau1)
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
114855557 (stau1)
mRNA cycle factors
Stress granule specific factors
114855557 (stau1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Staufen_C
dsrm
Calpain_inhib
Motif
Other DBs
NCBI-GeneID:
114855557
NCBI-ProteinID:
XP_029006638
UniProt:
A0A6P7MJU9
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All DBs
Position
5:12360982..12366897
Genome browser
AA seq
695 aa
AA seq
DB search
MSQLQFQCPSSPMPATTAPLQLGQPQPGYSIPCAAGTLPSESASQPVRSSSLPAGSATPY
NTTTVSNMANPKEKTPMCLVNELARFNKIQPEYKLLCEQGPAHSKIFSVRLTLGDQHWEA
EGTSIKKAQHSAAASALAETALPKPIVRTPRITAKNPADGLIQIMELNALCMRLGKKPMY
KPVDPYPGMRPPNFNYNVRGPGPYQRSMQQYYYPFPPVGPVIYHMELSIGSQQFLGKGRT
RQLAKLDAAAKALKVLQNEPILQQLPLMNGEPEEENLNKSEISQVFEIALKRNLPVNFEV
LKEEGPPHMKSFLVRVTVGEFTGEGDGKSKKIAKKLAAAAVLGELKRLPHIPSVEKTLPR
IKKKTKSIIKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYSMVTERGLPRRREFVMQVT
VCGQSAEGMGPSKKVAKRNAAEKMLDLLGYKVPQPQPPKPALKTDEKTPVKKPGDGRKVT
FFEPGSVEEVALGPKEEEFRLPYLSHQQLPAGILPMVPEVAQAVGACQGSQVKDFSRVNS
NPGKATITAMIANELLYAGTSQTAETILKNKSSLNHLPNGPLTRPSEQLSYLASAQGLQV
EYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELDQQSNERT
GNGPVSGCGKQELDGDLHVKQANSSTLAQTLDGTV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaactccagtttcaatgtccctccagccccatgcctgccaccactgccccgctg
cagctagggcagccacagcctggttacagcataccctgtgccgcgggcaccctgccgtcg
gagagcgccagccagcccgtcaggagctcgtctctgccggcaggttcagccactccttat
aacaccaccacagtatctaacatggcaaaccctaaagagaagacccccatgtgtttggtg
aatgagttagcccgttttaacaaaattcagccggaatacaagctgctgtgtgagcaagga
ccggctcactccaagattttctctgtgaggctcacgctgggggaccagcactgggaggcg
gaggggacaagcatcaaaaaagctcagcattctgctgctgcttctgccctcgccgagaca
gcacttcctaagcccattgtgaggacgccccgcatcacagccaagaatccagcagatggt
ttgatacagatcatggagttgaacgcactatgtatgaggctcggtaaaaagcctatgtat
aaaccagtcgacccatatcctgggatgagacctcctaattttaactacaatgttcgtggt
cctgggccttaccagcgctctatgcaacagtactactatccatttcctccagtgggacca
gttatataccacatggagctttcaattggcagccagcagtttctaggaaaggggcgtacg
cggcagttagctaaactcgatgccgctgccaaggccttgaaagtgcttcaaaatgagcct
atattgcagcagttgccattgatgaatggcgagcctgaggaggagaacctcaacaaatca
gaaatcagtcaagtgtttgaaattgcactcaaacgtaacttacctgttaactttgaggtt
ttaaaagaagaaggtcctccacacatgaagagtttcttggtgcgtgtgaccgttggtgag
ttcacgggagagggcgacggaaagagtaaaaaaattgcaaagaagctggcagcggcagcg
gtgctgggggagttgaagcgacttccacatatacccagtgtggaaaagacgctgcctcgc
atcaagaagaaaactaaatccatcattaagctacagaccagcccggagtatggtcaggga
atgaatcctattagccgcctggctcagatccagcaggctaagaaggagaaagagccggag
tacagcatggtgacagagagaggtctgccgcggcgcagagagtttgtcatgcaggttacc
gtttgtggccagtctgcagagggaatggggccgagcaagaaggtggccaaaaggaacgca
gcagagaaaatgttggacctcttaggatataaagtgcctcaacctcagccccctaaaccg
gcactcaaaaccgatgaaaagaccccagtgaaaaaacctggtgatgggcgtaaagtgacc
ttctttgagcctggttctgtagaggaggtggcattgggtccgaaagaggaggagttccgc
ctgccttacctgagccaccagcagctgcctgcaggtatcctgcccatggtgcctgaggtg
gctcaagcagtcggggcctgccaaggatcccaggtcaaggacttcagtcgagtcaattcc
aacccaggcaaggccacaatcactgccatgattgccaatgaactgctatatgcaggcaca
tcccagactgctgagactatcttaaagaacaaaagtagcctgaaccatctgcctaatgga
cccctcaccaggccctcagaacagcttagctatcttgcctctgcgcagggcctgcaggtg
gaatacaaagattttcccaaaaacaataagaatgagtttgtgtcactaatcaactgctcg
tcccagccaccattgataagtcacgggattgggaaagatgtagaatcttgtcatgatatg
gctgcactgaatatactgaagttgctctcagagttggaccagcagtcaaatgaaaggaca
ggaaacggaccagtctctgggtgtggcaagcaggagctggacggggacttgcacgtcaaa
caggctaactcaagcacattggcacagaccctggatggcaccgtttag
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