Betta splendens (Siamese fighting fish): 114855622
Help
Entry
114855622 CDS
T08231
Symbol
hcfc1a
Name
(RefSeq) host cell factor 1a
KO
K14966
host cell factor 1
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03083
Polycomb repressive complex
bspl04980
Cobalamin transport and metabolism
bspl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
114855622 (hcfc1a)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
114855622 (hcfc1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114855622 (hcfc1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bspl01009
]
114855622 (hcfc1a)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bspl03036
]
114855622 (hcfc1a)
03029 Mitochondrial biogenesis [BR:
bspl03029
]
114855622 (hcfc1a)
Protein phosphatases and associated proteins [BR:
bspl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114855622 (hcfc1a)
Chromosome and associated proteins [BR:
bspl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
114855622 (hcfc1a)
HMT complexes
COMPASS/SET1 complex
114855622 (hcfc1a)
MLL-HCF complex
114855622 (hcfc1a)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
114855622 (hcfc1a)
Mitochondrial biogenesis [BR:
bspl03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
114855622 (hcfc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
114855622
NCBI-ProteinID:
XP_029006754
UniProt:
A0A6P7MLI2
LinkDB
All DBs
Position
5:complement(1916139..1929009)
Genome browser
AA seq
1738 aa
AA seq
DB search
MSAPGSAVSGTTASVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKAKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
AGSNVVGWDIPITYGVLPPPRESHTAVVYTEKTSRKSRLIIYGGMSGCRLGDLWTLDIDT
LTWNKPSVSGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDSMCWESVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPHAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPAAASPAMSATPSQ
PVNSPKSPAPAAAAPSAQSLPQTAVLKVAAQQSTTGTSVVTVRPSQPGKSPVTVTSLPPG
VRMVVPAQTTQGSPIGSSPQMSGMAALAAAAAATQKIPPSSAGTVLNVPAGATILKTVAV
SPGTTTVKVASPVMVSNPATRMLKTAAAQVGTATASSPATTTRPIITVHKSGAVTVAQQA
QVVTTVVGGVTKTITLVKSPLTMGSSGTLISNLGKMMSVVQTKPVQTSAVTGQASTNPLT
QIIQTKGPLPAGTILKLVTSADGKPTTIITTSQAGGTGNKPTILNISGVSPTTTKQGTTI
IKTIPMSAIMTQPGATGVTSSAGMKTPITILTTKVMTTGTAGKIITAVPKLATAAGQQGL
TQVVLKGAPGQPGTILRTVPMSTVGGVRLVTPVTVSAVKPTVTTLVVKGTTGVTTLGTVT
GTVSTSLAGATVDSSNASLVTPITTLGTIATLSSQVINPTAITVSAAQTSLTSASTLPSS
TMTVQNQPTQVTLITTPSGVEAQPVQDLPVSILASPTSEQPSSTEAAAGEGSGTVTLVCS
NPPCETHETGTTNTATTSSATIGAGQVCSNPPCETHETGTTNTATTSSATIGAGQVCSNP
PCETHETGTTNTATTSSATIGAGQVCSNPPCETHETGTTNTATTASSNMSALRMCSNPPR
ETHETGTTNTATTASSNMGGVQQVCSNPPCETHVTGTTNTPTQSSSNMSADQTSTVQRVC
SNPPCETHETGTTNTPSTATSSMGGDQTSSASGLVQRVCSNPPCETHETGTTNTATTATC
SMDTGEGTAAQQTEEGGEGTSSTEAASTTAAAGMVTTTQGRAITTVTQSTPAPGPSVPSI
SSITEGVSTAASSTDEPMHTDEAASAEAAPTEEGATAMETQAEGEAATALNLPSELMSEG
QGATLMVTGLSDEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMNEGDSTGESQ
QPTNIPIMLTQQELAALVQQQQQLQEAQAAAQQATVDTSLPTEGLAPADSLNDPSVESNG
HNEMAAAVTSAVASLLPRTTAETLAPSSTFAPSVSVASPAKLQAAAALAEVANGIEGEKP
APLPAPVKPVVKKENQWFDVGIVKVTNMVVTHFYVPADDSLGDDDSGVIPDYSQMKKMEL
QPGTAYKFRVAGINACGRGSFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPNVT
SGKIIEYSVYLAIQSNQTAEAKASTPAQLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKP
AIIFRIAARNEKGYGPATQVRWLQESGKDAASAKPAAKRPGTSPDTKATGPKKARTDQ
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccctggctccgcggtgtctgggaccacggcgtcggttctgcagccgcggtgg
aaacgggtcctcggatggtccggtcctgttccccggcctagacatggacatagagccgtt
gctataaaggagctcatggttgtgtttggcggtggaaatgaaggcattgtggatgaatta
cacgtatacaacaccgcaacaaaccagtggtttattccagcggtccgtggcgatatacca
ccagggtgtgctgcatatggttttgtgtgtgatggcacaagattgctggtgtttggtgga
atggtagagtatggaaaatacagcaacgatctatatgaactacaggccagcagatgggaa
tggaaaaagttgaaggccaaaaacccaaagaatgggccacccccatgtccacgtctgggc
catagtttttccttggtgggcaataaatgctacttgtttggtgggttagccaatgacagt
gaggacccaaaaaacaacattcccagatacctaaacgacctgtacacgcttgagcttcgt
gcaggttccaatgtggttggatgggatattccaatcacttatggagttttgccacctcct
cgagagagccacactgctgtggtttacacagaaaagacaagcaggaaatctcggctcata
atctatggagggatgagtggctgtcggcttggagatttgtggacccttgatattgatact
ctgacatggaacaaaccatcagtaagtggcacagcaccacttcccagaagccttcactct
gctaccaccatcacaaacaagatgtatgtttttggaggatgggttcctttggtaatggat
gatgtcaaagtggccacacacgagaaggagtggaagtgcacgaacactcttgcttgccta
aatctcgactccatgtgttgggaatcagtgttaatggatactcttgaagacaacatccca
agggcccgcgctggccattgtgctgtggccatcaattccagactctacgtttggagtggc
cgtgatggttaccgtaaagcttggaacaaccaggtctgttgtaaagacctctggtacctg
gaaacagagcggccacatgcccctgccagggttcagttagtccgtgccaacacaaactct
ttggaggtgagctggggtgcagtctccactgctgacacctacttactgcagctgcagaag
tatgacatccctgcaactccagctgcagcctcaccagcaatgagtgcaaccccgtcacag
cctgtaaactctccgaagagccctgcaccagctgctgcagctccttcagcacagagtcta
ccacagacagctgtcttgaaggttgcagcccaacagtctaccacaggaacatctgttgtc
acagtccgccccagccagcctgggaaatccccagtcactgtgacatcccttcctccaggt
gttcgcatggttgtgcctgctcagaccacacaaggatcgccaatcggcagtagccctcag
atgagtggcatggcagctttagctgcagctgctgccgcgacacaaaagatcccaccctcc
tctgcaggcactgtgctcaatgttcctgcaggtgccaccattctcaaaacggtagctgtg
tcccctggcacaaccacagtaaaagtggcctctccagtcatggtcagcaacccagccact
cgaatgttgaaaacagctgctgcccaagttggtacagcaactgcatcctctcccgccacc
accaccagacccatcatcactgtgcacaagtctggtgcagtaacggtggctcagcaggcc
caggtggtcaccactgtggtaggaggagtaacaaagactatcactctggtcaagagtccc
ctcaccatgggcagcagtggcactctgatctccaaccttggcaagatgatgtctgtggta
caaacaaagccagtgcagacatcagctgtcacaggccaggcctccactaaccctctcaca
cagatcatacagacaaagggtcccctcccagcaggaactatcctgaagttggttacctct
gcagatggtaaacctacaaccattattaccacttcccaggcaggaggcacaggaaacaag
cccactattctcaacatcagcggcgtctcgcctaccaccactaagcagggcaccaccatc
attaagaccatccccatgtcagccattatgacccaaccaggagctacaggtgtgacgagc
agtgcaggaatgaaaacaccaatcacaatccttaccacgaaggtaatgacgaccggaact
gctggtaaaatcatcaccgcagtgcccaaacttgctactgcagctggccagcagggattg
acacaggtggttttgaagggtgctcccgggcaaccagggactattttgcgcactgtgccc
atgagcacagtgggtggtgttcgacttgttacaccagtgaccgtgtctgctgttaagccc
actgtcacgactctggttgtcaaggggactactggtgtcaccactcttgggacagtcact
ggtacagtctctactagcctggcaggagctaccgtggacagctccaatgcttctctagtg
actcctatcaccacactgggaaccattgctaccctgtccagccaggtcattaacccaact
gccataactgtgtcagccgctcagaccagtctgacctctgcctccacactgccctcctca
acaatgacagtacagaaccagcccacacaggtaactctgataacaactccaagtggagta
gaagctcagccagtgcaggatttgccagtgtccatcttggcttcaccaacctcggagcag
cctagctccactgaagctgcagctggagaaggttctgggactgtcactctggtatgctcc
aatccaccctgtgagacccacgagacaggaaccaccaacacggccaccacctcctctgcc
accattggagcaggacaggtctgctccaacccgccttgtgagacccacgagacaggaacc
accaacacggccaccacctcctctgctacaattggagcaggacaggtctgctccaacccg
ccttgtgagacccacgagacaggaaccaccaacacggccaccacatcctctgctacaatt
ggagcaggtcaggtctgctctaatccaccatgtgagacccatgaaacgggcaccaccaac
acagccacaactgcatcttcaaacatgtctgcactgcggatgtgctccaacccaccacgc
gagacccatgaaactgggacaactaacacagcgactacagcgtcctctaacatggggggc
gtccagcaggtgtgctccaacccaccatgtgagacccacgtgaccggtaccaccaacaca
cccacccagtcgtcatcaaacatgagtgcagaccagacaagcacagtacagagagtgtgc
tccaacccgccctgtgaaacccatgagacaggaaccacaaacaccccgtccacagctacc
tccagcatgggaggtgaccagaccagttctgcttcaggccttgtccaaagagtgtgctcc
aacccaccctgtgaaacacatgagactggaaccaccaacacagccaccactgcaacctgc
agtatggacacaggtgaaggcacagcagcccagcagacagaggagggaggagaaggtacc
agcagcacagaagcagcctctactactgcagcagctggcatggtcaccaccacccagggc
agggccatcactactgtcactcagtctacaccagcacctggaccttcagtaccttcgatt
tcctcaatcacagagggtgtgagtactgctgcaagctctactgatgaaccaatgcacacc
gatgaagcagcctcagcagaagctgcaccaacagaggagggagctacagctatggagaca
caagcggaaggagaagcagcaacagctttgaacctgccctcggagctgatgtctgagggt
cagggagccacactcatggtgactggactgtcggacgaagagctggctgtgacggcagcg
gcagaggctgctgctcaggctgcagccactgaagaagcccaggccctcgctatccaggca
gtcctccaggcagctcagcaagcagttatgaatgaaggtgattctactggtgagagtcag
caacccacgaatatccccatcatgttgacccagcaggagcttgcagcgctggtacaacag
cagcagcagctgcaggaagcgcaagctgcggcccagcaggccactgtggacacaagctta
cccactgagggcctcgctccagccgatagcctcaatgatccgtctgttgagagcaatggc
cacaacgagatggctgctgcagtcactagtgctgtggcctccttgttgccacgtaccact
gctgagacacttgctccatcaagtacatttgcaccatctgtatcagtggcaagtccagcc
aagcttcaagcagcagccgcacttgcagaagtcgccaatggcattgagggagagaagcca
gctcctctgccagccccagtgaagccggttgtgaagaaggagaaccaatggtttgatgtt
ggaattgtaaaagtgaccaatatggttgtcacacatttctatgtgccagcagacgactcc
ctaggcgacgatgactctggtgtcatacccgactatagccagatgaagaaaatggagctg
cagcctggaacggcttacaagttccgtgttgctggaatcaatgcttgtggtcgtggttct
ttctcagagatctctgctttcaagacttgtctaccaggcttcccaggagcaccatgtgcc
atcaaaatcagcaagagcccagatggtgcccatctgacatgggaaccaccaaatgtgaca
tcagggaagatcattgagtattccgtgtacctggccatccagagtaaccagacagctgaa
gctaaggcctccaccccggcgcagttagccttcatgcgagtgtactgtggacccaaccct
tcttgcttggtgcagtcgtccagcctctcaaatgcccacatcgactacacaactaagcca
gccatcatcttccgcattgccgcccgcaacgagaagggttatggtccagccactcaagtt
cgatggctacaagaatctggcaaagatgcagcctcggcaaaaccggccgccaaaagacca
ggcacctctcctgatactaaggctactggtccaaagaaagcaaggacagaccagtga
DBGET
integrated database retrieval system
