Betta splendens (Siamese fighting fish): 114856230
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Entry
114856230 CDS
T08231
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114856230 (ccdc174)
03041 Spliceosome [BR:
bspl03041
]
114856230 (ccdc174)
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114856230 (ccdc174)
Spliceosome [BR:
bspl03041
]
Complex C
Other components
EJC/TREX
114856230 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
114856230
NCBI-ProteinID:
XP_029007863
UniProt:
A0A6P7MN46
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Position
5:10193878..10198346
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AA seq
558 aa
AA seq
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MDKKKKPFDVTASSLVDLKAELYRKQEQFKQEKLGQENAGAGFKSAKVKKPNVWSKQNAG
VSARAEKDAEQLSEEQRSLDTSRRKLEEKAKLYEQMTKGDFPDEETEGLFLVDFTQKIID
KKRQTFAQQETERDDEDRGSLSPIPAPQHPDEEWVDYVDALGRSRRCMKKDLPDFRKMDQ
DLHGQGKSSSDKTLLSEDMRRELQRQEWEREEEEAMKKPVGPIHYENIRAQEARELGVGY
FAFSHDEEQRRKQRETLDMLRDQTTDQRTKRERLKEKRQAILKARLAKVRQRKMKNAKLD
GTEQEEQEEEMEEQEEEAEIGGIAPLPEECPEVSTLKKVEVEIQERRDTRPGVPHVREWD
RGKEFMFTEWKSRRRDERESEFAPPSAYFNDERRRPGKSKTHESKSKMSFPWTKGPDVSS
ESQEETQAPPTTTTTPSPLQQKPPPPSPPETAPQAAPPVPPAAPVSAPPFIPHYAPPPPT
PLFYPMFPPPHPSSFGCPPRLPPPHFAPQYPYQYPAQYPPQQQSQVQPQQVPQPAEQSGA
EQPSQSLDDMLSFYRNST
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagaagaaacctttcgacgtgaccgcttcatctttagtggacctcaaagct
gaactttacaggaagcaggaacaattcaaacaggagaaacttggacaagaaaatgctggt
gctggattcaaatcggccaaagtcaagaaacctaatgtgtggagtaaacaaaacgctggc
gtttcagcaagagctgagaaagatgcagagcagctgtctgaagagcagagaagcctggac
acgtcaagacgcaaattggaggaaaaagccaaactttatgagcagatgacaaaaggagac
tttccagacgaggaaacggagggactgttcctggttgatttcacacagaagattattgac
aagaaaagacaaacttttgcacaacaggaaacggagagagatgatgaggacagaggcagc
ttgtcacctatacctgctccacagcatccagatgaggaatgggtggattatgtggacgct
ctgggccgatctcgaagatgcatgaagaaagacctaccagactttaggaaaatggatcaa
gatcttcatggacaagggaaatcctcatctgacaagaccttgctctcggaggacatgcgt
cgcgaattgcagagacaggagtgggagagggaggaagaggaggctatgaagaagccagtc
ggaccaatccactatgagaatatcagagcacaagaggctcgagagcttggtgttggctac
tttgcattctctcatgatgaagagcagcgcagaaagcagagggaaactctagatatgcta
agagatcagactacagaccagcgcactaagagagaacgtctgaaagagaagaggcaggcg
attctgaaggctcgactggccaaggtgaggcagaggaaaatgaagaatgccaagttggac
ggcactgagcaagaagaacaagaggaggagatggaagagcaagaagaggaggctgaaata
ggaggcattgcaccactgcctgaagaatgtcctgaggtcagcacacttaaaaaggtggag
gtagagatccaggagaggagggacactagaccaggagttcctcatgtcagagaatgggac
agaggcaaagagttcatgttcactgagtggaaatcgcgtcgaagggacgagcgagagtcc
gaatttgcacctccttctgcatattttaatgatgagaggagacgaccagggaagagtaaa
actcatgagagtaaatctaaaatgtccttcccgtggacaaagggtccagatgtaagctct
gaaagccaagaggaaacacaagccccacctactactactactactccttcacctctacaa
caaaagcctccacctccttcacctccagaaaccgcaccgcaggcagcaccacctgtcccc
ccagctgctcctgtgtctgctcctcccttcattcctcattatgcaccccctcctcctact
cctcttttttatcccatgtttcctcctccacatccttcttcctttggatgtccacctcgc
cttcctcctcctcactttgctccacagtacccttaccagtatccagcccagtatccaccc
cagcagcagagccaggtacagcctcaacaggtccctcagcctgcagagcagagtggagct
gagcagccatctcagagtctggatgacatgctgtccttctacaggaactctacctga
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