KEGG   Betta splendens (Siamese fighting fish): 114856250
Entry
114856250         CDS       T08231                                 
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
bspl  Betta splendens (Siamese fighting fish)
Pathway
bspl03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:bspl00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    114856250 (rae1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bspl03019]
    114856250 (rae1)
   03036 Chromosome and associated proteins [BR:bspl03036]
    114856250 (rae1)
Messenger RNA biogenesis [BR:bspl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     114856250 (rae1)
Chromosome and associated proteins [BR:bspl03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    114856250 (rae1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_EML_2 Beta-prop_WDR3_1st WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd WD40_RFWD3 ANAPC4_WD40 Beta-prop_EIPR1 eIF2A Beta-prop_IFT140_1st Beta-prop_ACSF4 NBCH_WD40 Beta-prop_SPT8 ExoI_SH3 Beta-prop_WDR41
Other DBs
NCBI-GeneID: 114856250
NCBI-ProteinID: XP_029007888
UniProt: A0A6P7MN72
LinkDB
Position
5:complement(1158301..1162576)
AA seq 369 aa
MSLFGATTGFGTGGTGVFGSTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDACWSDDGSKVFTASCDKTAKMWDLNSNQA
MQIAQHDGPIKAIHWIKAPNYSCVMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAISFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNHNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagtttattcggtgcgaccactgggttcggtacaggagggactggtgtgttcggaagc
acaacgacagacagccataatcccatgaaggacgttgaagtgacttcacctccagatgac
agcatcagttgcctggctttcagtccacccaccatgccagggaacttcctcattggaggg
tcctgggccaatgatgtccggtgctgggaggtgcaggataatggacagactgtacccaaa
gcccagcagatgcacacaggtccagtgctggatgcatgctggagtgatgatgggagtaaa
gtcttcactgcttcctgtgacaagacggccaagatgtgggatctcaacagcaatcaagca
atgcagatcgcacagcatgatggtccaatcaaagctatccactggataaaagcccctaac
tacagctgtgtcatgactggtagctgggataaaacgcttaagttctgggacactcgatct
cccaatccaatgatgtcattgcagatgccagagagatgctactgtgcagatgttgtgtac
ccgatggcagtggttgccacagccgagagaggcctgatagtgtaccagttggagaaccaa
ccctctgagtttcgcagaatagactctcctctgaaacatcagcatcgctgtgttgccata
ttcaaggacaaacagaacaagcccactggctttgcactgggaagcattgagggcagagtg
gccatccactatatcaaccctccaaacccagccaaagacaactttaccttcaagtgccat
aggtctaatggaaccaacacaaccactcctcaagacatatatgctgtgaatgctatctcc
ttccatcctgtccatggcacactggcgactgttgggtcagatgggcgcttcagtttttgg
gacaaagatgcccgcaccaagttgaagacttcagagcagttagaccagccgatcacagcc
tgttgcttcaaccacaatggcaacatttttgcttatgcttccagttacgactggtcaaag
ggccatgagtactacaacccccagaaaaagaactacatctttctgaggaatgccgctgag
gaactgaagcctcggaacaagaaatggtga

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