Betta splendens (Siamese fighting fish): 114856250
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Entry
114856250 CDS
T08231
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
KO
K14298
mRNA export factor
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114856250 (rae1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114856250 (rae1)
03036 Chromosome and associated proteins [BR:
bspl03036
]
114856250 (rae1)
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114856250 (rae1)
Chromosome and associated proteins [BR:
bspl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
114856250 (rae1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_EML_2
Beta-prop_WDR3_1st
WDR55
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_EIPR1
eIF2A
Beta-prop_IFT140_1st
Beta-prop_ACSF4
NBCH_WD40
Beta-prop_SPT8
ExoI_SH3
Beta-prop_WDR41
Motif
Other DBs
NCBI-GeneID:
114856250
NCBI-ProteinID:
XP_029007888
UniProt:
A0A6P7MN72
LinkDB
All DBs
Position
5:complement(1158301..1162576)
Genome browser
AA seq
369 aa
AA seq
DB search
MSLFGATTGFGTGGTGVFGSTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDACWSDDGSKVFTASCDKTAKMWDLNSNQA
MQIAQHDGPIKAIHWIKAPNYSCVMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAISFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNHNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKKW
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagtttattcggtgcgaccactgggttcggtacaggagggactggtgtgttcggaagc
acaacgacagacagccataatcccatgaaggacgttgaagtgacttcacctccagatgac
agcatcagttgcctggctttcagtccacccaccatgccagggaacttcctcattggaggg
tcctgggccaatgatgtccggtgctgggaggtgcaggataatggacagactgtacccaaa
gcccagcagatgcacacaggtccagtgctggatgcatgctggagtgatgatgggagtaaa
gtcttcactgcttcctgtgacaagacggccaagatgtgggatctcaacagcaatcaagca
atgcagatcgcacagcatgatggtccaatcaaagctatccactggataaaagcccctaac
tacagctgtgtcatgactggtagctgggataaaacgcttaagttctgggacactcgatct
cccaatccaatgatgtcattgcagatgccagagagatgctactgtgcagatgttgtgtac
ccgatggcagtggttgccacagccgagagaggcctgatagtgtaccagttggagaaccaa
ccctctgagtttcgcagaatagactctcctctgaaacatcagcatcgctgtgttgccata
ttcaaggacaaacagaacaagcccactggctttgcactgggaagcattgagggcagagtg
gccatccactatatcaaccctccaaacccagccaaagacaactttaccttcaagtgccat
aggtctaatggaaccaacacaaccactcctcaagacatatatgctgtgaatgctatctcc
ttccatcctgtccatggcacactggcgactgttgggtcagatgggcgcttcagtttttgg
gacaaagatgcccgcaccaagttgaagacttcagagcagttagaccagccgatcacagcc
tgttgcttcaaccacaatggcaacatttttgcttatgcttccagttacgactggtcaaag
ggccatgagtactacaacccccagaaaaagaactacatctttctgaggaatgccgctgag
gaactgaagcctcggaacaagaaatggtga
DBGET
integrated database retrieval system