Betta splendens (Siamese fighting fish): 114856793
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Entry
114856793 CDS
T08231
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF isoform X2
KO
K23195
transcriptional repressor CTCF
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bspl03000
]
114856793 (ctcf)
03036 Chromosome and associated proteins [BR:
bspl03036
]
114856793 (ctcf)
Transcription factors [BR:
bspl03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
114856793 (ctcf)
Chromosome and associated proteins [BR:
bspl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
114856793 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451
zf-met
zf-C2HE
zf-C2H2_6
zf-C2H2_15
zf-WIZ
zf-C2H2_ZN142
zf-MYST
Motif
Other DBs
NCBI-GeneID:
114856793
NCBI-ProteinID:
XP_029008365
UniProt:
A0A6P7MQ77
LinkDB
All DBs
Position
6:235569..245882
Genome browser
AA seq
838 aa
AA seq
DB search
MDRGPTDGVGVVEIPAKDFSSIQAVHSQDDMVADLLQQAAEAGGVVQEQDGVVLDQVQGA
EMVPTSQTQQQLISAGVDGGAGVEMMVMDSLDPTLLQLKTEVIDGAIGGSSATVGVVGGV
AGAAHQATVTTVDQTQIITLQVVNMEEQAALGLGELQLVQVPVSATTVEALQQATFVDTT
AIPKDGEPVICHTLPLPEGFQVVKVGANGEVETVEQEEEGGQDNAEEVEDDEVGNQLLEE
GEDEPIQPLNDDPTWTKDPDYQPPGGAIKKTKKGKKSRLRYAEGDKDMDVSVYDFEEEQQ
EGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERP
HKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKC
SMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICH
ARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCRYCD
AVFHERYALIQHQKSHKNEKRFKCDMCDYCCRQERHMVMHRRTHTGEKPYSCSQCEKTFR
QKQLLDMHFKRYHDPNFVPTVFVCPKCSKTFTRRNTMARHAENCSGEVDDAENGAPGPKR
GTRGRKRKMRTRRDDDSEDDQAELDEEDEGDCEEETMLQEDDQPESIELDQAPPAIPLPA
PEEPPVKRKRGRPPKNAPKPPPPSKSVRVAAKAAASAAAIIQVDNESTGAVENIIVKKEE
GDHSTVTSMEEGVALTVAGVRLDGDGAETVDLAMSEETTGAAANGDLTPEMILSMMDR
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggacagagggccaacagatggtgtaggggtggtggagatccctgccaaagatttttcc
tctatccaggctgttcatagccaggatgacatggttgctgaccttcttcagcaagcagca
gaggcagggggtgtagtacaagaacaagatggcgttgtccttgatcaagtgcagggggca
gaaatggttccaaccagccagacacaacagcagctgatcagtgctggagttgatggtgga
gcaggggttgaaatgatggttatggactcactggatcccaccttattgcaactgaagact
gaggtaatagatggtgcaataggaggatcgtcagcaacagtgggtgtagttggaggggta
gcgggtgctgcgcaccaagctactgttacaacagttgaccagacccagatcatcacacta
caggttgtaaacatggaagagcaggcagctttgggcctaggggagcttcaattggtccag
gtgcctgtgtctgctaccactgttgaggccctgcagcaagccacctttgtagacaccact
gctattccaaaggatggagagccagtaatctgccacacactgccactgccagagggtttt
caggttgttaaggttggtgctaatggggaggtagaaacggtggaacaagaagaggagggg
ggacaagacaatgctgaagaagtggaagatgatgaggtgggaaaccaactgctggaggaa
ggggaggatgagcccattcaacctctgaatgatgacccaacctggacaaaagacccagac
tatcagcctccaggtggagccataaagaagaccaaaaaggggaaaaaaagtcgtctgcgt
tatgctgaaggagataaagacatggatgtcagtgtctatgattttgaagaggaacagcaa
gagggccttctgtcagaggttaatgctgaaaaggtagtgggcaacatgaaaccacctaaa
ccgaccaagatcaagaagaaaggagtaaagaagacatttcagtgtgagttgtgtagctac
acatgtcctcgacgctccaatctggacaggcacatgaagagccacacagacgagagaccc
cacaagtgtcacttatgtggaagagcttttcggactgtcaccctgctcagaaaccatctc
aatacacacacaggaacccgtccacacaagtgcacagactgtgacatggcttttgtgaca
agtggagagctggttcgtcaccgacgttacaaacacactcatgaaaaacctttcaaatgc
tccatgtgtgactatgccagtgtggaggtcagcaaactgaagcgtcacattcgttcccac
actggcgagcgtccattccagtgcagtctttgcagctatgcaagcagagacacatacaag
ctaaaaagacacatgaggacacattcaggagaaaaaccctatgagtgttacatctgccat
gctcgattcacccaaagcggaaccatgaagatgcacattctgcagaaacacacagaaaat
gtggccaagtttcattgtccacactgtgacactgtcattgcacgcaagagtgatttgggg
gtgcatcttcgtaagcagcattcatttattgagacgggcaagaagtgtcgttactgcgat
gcggtctttcatgagcgttatgctctgattcagcaccagaagtcccataagaatgaaaag
aggttcaaatgtgacatgtgtgactactgctgtcgccaggagcgtcacatggtgatgcat
cgtcgaacccacacaggagagaagccatactcctgcagccaatgtgaaaaaacctttcgg
cagaagcagctgctcgacatgcacttcaaacgctaccatgaccccaactttgtgcccaca
gtctttgtctgtcccaagtgtagcaagacgttcactcgcaggaacaccatggctcgacat
gctgagaactgcagtggtgaggtggacgatgctgagaatggagctccaggtccaaagaga
gggacgagaggaagaaaacggaaaatgaggaccaggagagatgacgacagtgaggatgat
caagctgaactagatgaggaagatgagggtgactgtgaggaagaaacaatgctacaggaa
gatgatcagccagagagcattgagcttgaccaagccccccctgccattcctctaccggcc
cctgaagagcccccagtgaagaggaaacgagggcgccctccaaagaatgcccccaagccc
ccaccacccagcaagtcagtcagggtggctgcaaaggctgctgcttctgctgctgccata
attcaggtggacaatgagagcaccggagcagttgaaaacatcatagtgaagaaggaggaa
ggtgaccactctacagttacttctatggaagagggagtggccctaacagtggcgggggtg
aggctagatggggatggggcggagacagttgatctggctatgagcgaagaaacgacaggc
gctgccgccaatggagatcttacaccagagatgatcttaagcatgatggaccgataa
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