Betta splendens (Siamese fighting fish): 114856913
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Entry
114856913 CDS
T08231
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114856913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bspl03021
]
114856913
03036 Chromosome and associated proteins [BR:
bspl03036
]
114856913
Transcription machinery [BR:
bspl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
114856913
Coactivators
SAGA/TFTC/STAGA complex
114856913
Chromosome and associated proteins [BR:
bspl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
114856913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
114856913
NCBI-ProteinID:
XP_029008623
UniProt:
A0A6P7MQM7
LinkDB
All DBs
Position
6:19441954..19451877
Genome browser
AA seq
968 aa
AA seq
DB search
MAGASDPLEDMLFTEVDEKAVSDLVGSLESQLGDRKSPAAPYSDGKREAAPASAVQFSEK
VRDPVGSLEQPQQGHPAVGLTQEPGANESLSGKSLSVSTSSVTAAIPVGAGLQIVGAAPS
GPGPVTLPNQPGAASFHRAPAVGPSVAPSSTVAPVVEPLGTVSPGLQSLNGGAVKLVNSP
AGTSTVISSVTPGGAAILAPMASQLGFSVPPSSAASSAVGLQKHPSPGASVAQNGVDPKA
GPLVTQGAPSVSTSQVLNHSNPLMHTKMLVPSLPVSGSSVILTSTPPPSVQSSISQAQTG
TSTAGVKLSVNGVAQPTLAVVRPPGTATVATSIQQQRPGLVGNPTRAAAPQPPLAVRPQQ
QTTIQLPPGFTMPPGMVLVRTETGQLVMVPHQVLAQAQAKTQQAQAVVTQRPATPTAGAT
IRVSTATTAPGTPQTIRLASPAQTRMVQAPATTTVQAITVAPSGAAVKMTTPQNAQTVIT
AGGTSAAKPAGVPSTPVNSTTPTLAATPPARVTVVSQEMQENVKKCKNFLSTLIKLASHN
SPSPETSKNVKALVQDLLDAKIEPEEFTTRLQAELKSSPQPYLIPFLKKSLPALRQSLLS
SQQSLVTPAPSTSVPPPAAPGSVTTTIRQRLPVSPAGGAVRLTAPVTNTTALAVGRTGLQ
TVQPRTPVVIGPAVRAQATLVRAPTTIISKTPLHLAASANQKKLSDPGGGTFRDDDDIND
VASMAGVNLNEENARILATSSELVGTKIRSCKDESFLPPGLLHRRVLDTAKKYGVTEVPL
DVVNFISHATQSRLRSLLEKVSAVAQHRTDGGRDEEHYEQSSDVRSQLRFFEQLERMEKQ
RKDEQEREILLKAAKSRARQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRK
KRKLESLGGSAAGAEVPSGSGSGSVMPTSSRQQLRQRITRVNLRDFIFCLEQDHTTTRSL
MLYKALLK
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcctccgacccactggaggacatgctcttcactgaggtggatgagaaggcg
gttagcgacctggtcggttccctggagtcacaactgggcgaccgaaagtctcccgctgct
ccatattccgacggaaaacgggaggcagctccagcctccgcagtgcagttctctgagaaa
gtgcgcgatccagtggggtctctagagcagccgcaacaagggcatccagccgtggggtta
acccaggagccgggcgccaatgagtccctctccggtaaaagcctctccgtctctacctcc
tctgtcactgccgcgattcccgtcggagccgggctgcagatagttggagcagctccttca
ggaccgggacccgtaactttgcccaatcagcccggagctgctagcttccaccgggcgcct
gccgtgggtccgagcgtggctcccagctccactgtggctccggtggtggagcctctcggg
accgtttctcctggactgcaaagtttaaacggcggagctgtgaagttggtgaactcgccc
gccgggaccagcacggttataagttctgtgactccggggggggccgcgattctcgcgccc
atggcttcacagcttggtttctcggtacctccgtcttcagcggcatcttccgctgtgggt
ttgcagaagcaccccagcccgggtgccagtgtagcccagaacggggtggaccccaaggcc
ggcccattggtgacccagggtgccccatccgtctccacctctcaggtcctgaaccacagc
aaccctctgatgcacaccaagatgctggtgcccagcctgcccgtgtctgggagctctgtc
atcctgaccagcacccctcctccatcagtccagtcctccatcagccaggctcagactggt
accagtactgctggggtgaagctctcggtcaacggcgtggcccagcctacactggctgtg
gtcaggccgcccgggactgctaccgtggccacctccatccagcagcagagacctggactg
gtggggaaccccacacgggcggctgcccctcagcctccgctggctgttcggccgcagcag
cagaccaccatccagctgccccccggcttcaccatgcctcctggaatggttctggtccgt
acagagacgggtcagctagtgatggtccctcatcaggtcctggcccaggcccaggccaaa
acacagcaggcccaagcagtggtcacccagagaccagcaacacccacggccggagccacc
ataagggtcagcaccgccaccacggctcctgggacacctcagaccattcgcctggcctcc
ccagctcagaccaggatggttcaggctcccgccaccaccactgtacaggccatcaccgtg
gctccaagtggagcagctgtcaagatgaccacccctcagaatgcccagactgtgataaca
gctggggggacatctgcagccaaaccggcgggggtcccgtccacaccggtgaacagcacg
acccccactctggccgccacgccacctgccagagtcaccgtggtgtcgcaggaaatgcag
gaaaatgtgaagaaatgcaagaacttcctttccacgcttatcaagctggcatcccacaac
tccccctcaccagaaacctccaagaacgtgaaggccctggtgcaagacctgctcgatgct
aagatcgagccagaggagttcaccacacggctgcaggctgagcttaagtcttctccacag
ccctacctcattcccttcctcaagaaaagcctccccgccctgcgccagtctctcctaagc
agccagcagtctctggtcacacctgcccccagcacctctgtgcctccccctgctgccccc
ggctctgtcaccaccaccatcagacaacgactgccggtcagtccagctggtggcgccgtc
agactgactgctccagtcaccaacacaacggctctggctgtgggcagaactgggcttcag
actgtgcagcctcgtacccctgttgtgatcggcccagctgtcagagctcaagccacactg
gtgagggcacccacaaccattattagcaaaactccacttcacctggcagcttcagccaat
cagaagaaactcagtgacccggggggcgggacattcagagacgacgacgacattaatgat
gtagcgtccatggctggtgtcaacctcaatgaagaaaacgccagaatccttgcaaccagt
tcagagcttgttggcacaaagattcgctcatgtaaagacgagtcctttctgccccctggc
ctgctgcaccgccgtgtcctggacacagctaagaagtatggtgtgactgaggtgccgctg
gatgtggtgaacttcatttctcacgcaacccagtccaggttgcgctccctactggagaag
gtttcagctgtggcccagcatcggacagacggcgggagggatgaagaacattatgaacag
tcgtcagacgttcgctctcagcttcgtttcttcgagcagctcgagcgaatggagaagcaa
aggaaagatgagcaagaaagagagatcctgctgaaggcggccaagagtcgtgctagacaa
gaagatccagaacaggctcgtctgaagcagaaggccaaggagatgcagcaacaggagctg
gctcagatgagacaacgagacgcaaacctcacagcccttgcagccattgggcctcgcaag
aaacgcaagctggagtcactgggaggatctgcagctggtgctgaggttccgtcgggttcg
ggatcgggttcggtcatgccgacctcctctcgccagcagctccgccagcggatcacacga
gttaacctcagggacttcatcttctgtctggagcaggaccacaccacaacccgctctctc
atgctctacaaggctctgctgaagtga
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