Betta splendens (Siamese fighting fish): 114856983
Help
Entry
114856983 CDS
T08231
Symbol
nlrc5
Name
(RefSeq) NLR family, CARD domain containing 5 isoform X1
KO
K22615
NLR family CARD domain containing 5
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
bspl04054
]
114856983 (nlrc5)
Pattern recognition receptors [BR:
bspl04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
114856983 (nlrc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
Atypical_Card
LRR_4
NOD2_WH
AAA_30
Motif
Other DBs
NCBI-GeneID:
114856983
NCBI-ProteinID:
XP_029008820
UniProt:
A0A6P7MRH9
LinkDB
All DBs
Position
6:complement(3351475..3371140)
Genome browser
AA seq
1904 aa
AA seq
DB search
MDEELDPDGNNVNSVLAQESSELFSIITNQSNTVILKLCQMMPEGTGWNAGHLALSTTSA
AVKEAIKATLEYFKMASAVECRNFLQTVCMLCEDIPMHLESRLMSVAGYANTDVIQSATR
ETVSLTTTDGCGISSPRVTDKKSFLPPSEPQHIKRQRIDYWQEYMTAAKNLLKRRWELLS
RHLVKEVHLENVWINPRRSSRGRDRPDQTPGRSRTPDPDEGVVFPESKVTLDNFLQECTG
KVTVVAGLAGSGKTLLMSCLGQQWADGLGPIPSSFLFIVLEFRQLNLLSGPLSLSELLFR
HYLPPDGDEYKKRDVMNYLFSNPEQSCWVLDGYDEFNSRLTKHDMQTDLLDPETPLSVAE
LISGLLHRQLLPGCTVLVTCRLRDVVDLEDISFKVGQLLEWGQHEIKEYVENFFRGQGDP
AVRDHGLQPANLILSNRHFLAMSSLPALCNICCICVKHLLLEDKEGATGVQSANRGEESG
PLLRTNEKEAKELQTEGTTNVDHIYPTLTQVYLTVLRAFFRLYSGKGGAPDKAKSPTQQS
TVGRLDPLNQYRAELCELTQLAWSGLEKHKILFMEDDVSQNLLELSVRTGLFSQVEHRHD
GMLVNMYSFIHLTIQEFLAAVRIMSSNDVTDTQLKNRFSLKTRWTTKSDQKTVFTDSFHL
YVCGLASSRCTQALVQLASLSFGTGAQSWVRKRQALVLKLLNKKCQSNTLTGPKILELCH
CIQESQDNQLAKQFVDTRPTVELRNIPLSANDIHALAFVVGSVSDNGIGLDFGACSMEPE
WLNVLSKCRCINCLSFHSRKYGDKFAEKLSFILPKFITLRKIEFTGATMTATGAASLASA
LQSCQHRPIEEINLSDNNLRDEGIRHIADVFTNLPKLAVVMLGRNNSSLQALDYLVGKMS
QCLRIKHVHADGMKEVKVTFYPNSDIDSNKEPYEPTVSLLNQKWSTPDMQKLANSLACCP
ALSLLDLSGGLWDVEILKTLTQVLPKFHITKYVKLNDSCSSVNGLVVLTALLSLCPNVVE
LHIRLQPSRGPKQISIVFSEKTEKPAVKMTKRLSLNCCGLLPADLDRVWQSLGTSSDLTV
LDLSSNRLGNKSLKKLLHILPRLHSIQEIDASKNGISMKAVFTLAEAFCSCNNLTQIHVS
DGGQNQVLLKFSPDISYKKLQLKIFRINHSTLLPSDIASLCNKLAQCDSSMELDLSHSPL
SDQAVKNLLELLPKMKSLRKLNISHSITSTTGALMLVSGFTGNQRVTSVELSHQSESFVH
FDIVKAEQTSCRLTDFNLNCTDLEQLLQILQQGPRLSNLDLSSNQLDDEAVKCLVGFLPS
LPIKNCINLSNNNLSQQGLLDVASTLSDRGNVSGADVSSLGPEKRCLIWFRQYESCEKTL
SVRDSGLKHEHLVRLAEIVSSCSSPIKLLLKDNSLQAEWIQDFVKALNRDCSECSVSIKE
DWIGAEEAVRLMCVCLVLNTNIVSLRVHQNSLHLSVTSVSINSRDPNPSLTTEKIGLIDC
AVHGHRLAHMRSIIQKCPLLTELDLDIEAAEFLCCVLPLLPNLSSLSISSKDTCPDLLEN
LAEVLVQSTSIQNLNLSGYVIEDAAAQIMTRMFPRLLSLNLSHCKGSATARLQLSEALGE
CVSLEGLCLDLYEDNRVCLARAIRKNKSLRSLKLNSIPMEPPAVDGVLDLLGAMDGLTQV
ENIELESWRMAEIGAEQLTKLLPVWTGLRKISLSNNLISDHSGDKLLEALISCSHLEELH
LSSNRLGDLTATRMALVLPSLTHITVLDISENSFGCEGAVSLSKAIMCMKKLTKINLTSI
GTSELCPIAASLAHCPLIQDVNLGWNNCEDNVALELARVLPSYQKLTRIDLESNCVSAVG
VEALVKMVKSCPALQLIRLWRNKVSPIEAQRLSDKDRRLNFSPT
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggaacttgaccctgacggcaacaatgtgaactccgtcttggctcaggaatcc
tcagaactgttctccatcattacgaatcagtcaaatacagtcatattgaagttgtgccaa
atgatgcccgaaggcactgggtggaacgccggccatctggccctctccaccacttcagca
gcagtaaaagaagccattaaagctacgttggagtacttcaagatggcaagcgctgtggag
tgccgcaactttcttcagactgtttgtatgctgtgtgaggacatcccaatgcatctggag
tctaggctcatgtcagtggctggatatgcaaacactgatgtcattcagtctgcaaccaga
gaaacagtgtctctgacaaccacagatggatgtggaatttccagtcccagggtaacagat
aagaagtctttcctgccaccttcagagccgcagcacatcaagcgccaacgaattgactac
tggcaggagtacatgactgctgcgaaaaatttactgaaaagacgatgggagctactgagt
aggcatctagtgaaggaggtccatttagagaatgtgtggatcaacccaaggaggtcaagc
agaggcagagacagacccgatcaaaccccgggacggagcagaacacctgaccccgatgag
ggtgtagtgtttccagagtccaaggtgacactggacaacttcctccaagaatgtacagga
aaggtgacagttgttgctggtttggctggatcaggaaaaactctgctgatgtcatgtttg
ggacagcagtgggcagacggacttggccccatcccgtcatccttcctctttattgtgctt
gagtttcgtcagctcaatctactttccggtcctctttccctgtctgagctgctattccga
cactacctccctcctgatggggacgaatataaaaagagagacgttatgaattacctattt
tctaatccagagcaaagctgttgggtgttggatggctatgacgaatttaacagcagactc
accaaacatgacatgcagacagatctgctggacccagaaacacctctgtctgttgcagag
ctcatatcaggtttgctacatcggcagcttcttccaggatgcactgtgctggtgacctgt
cgcttacgtgatgttgtggacttggaagacatatcatttaaagtaggacagttgctggaa
tggggccaacatgaaatcaaagaatatgtggaaaacttctttagaggtcaaggtgaccca
gcagtcagagatcatgggctgcagccagcaaatcttattctttccaatcgacacttcctg
gccatgtcctcccttcctgccctctgcaacatctgctgcatctgtgtgaagcatctacta
cttgaagataaagagggagcaacaggagtacaatctgcaaacaggggtgaagaaagtgga
cctctgttaagaacaaacgaaaaagaagcaaaggaactacaaactgaagggacgacaaac
gtggaccacatatatcccacacttacccaggtctacctcactgttcttagagcgtttttt
aggctttactctggtaaaggtggagcacctgacaaagcaaaaagtccaacacaacagagt
actgttggccgactggatcctctgaatcagtatcgagccgagttgtgtgagctgactcag
ctggcctggagtggcttagagaaacacaagatcctcttcatggaggatgatgtatctcag
aatcttttggagttgtcagtcagaacagggctcttctcacaggtggagcacagacacgat
gggatgcttgtcaacatgtacagcttcattcacctgacaatacaggagtttctggctgca
gtcagaatcatgtccagtaatgatgttactgacacacagcttaagaacagattcagtctg
aaaacacgctggacgaccaagtcagaccagaaaaccgtcttcacagactcctttcactta
tatgtatgcggtctggcttcgtcacgttgtactcaggcccttgttcagttagcaagcctg
tcgtttggaacaggagcccaaagctgggtccgaaaacgacaagccctcgttctgaagctg
ctaaataagaaatgccaaagcaacaccctgactggaccaaagatcctggaactttgtcac
tgtatccaggagagccaggataaccaactggccaagcagtttgttgatacgagacccact
gtggagctgcgtaacatccccctatcagctaatgatattcatgctcttgcttttgtagtt
ggctcagtgagtgataatggcattggactggactttggagcatgctcaatggagccggag
tggttaaatgtgttgtccaagtgtagatgcatcaactgcctcagtttccacagtcgaaag
tatggagacaagtttgctgagaagctgtctttcattttgcccaaatttataaccctgaga
aaaatagagtttactggtgccactatgactgcaacaggagcagccagtttggcttctgct
ttacagagctgccaacaccgacccattgaagaaatcaatttgagtgacaacaatctgagg
gatgaagggatcagacacattgctgatgtctttaccaatctaccaaagctggccgttgta
atgctgggtcgaaacaacagctccctgcaggcactggactatcttgttggcaaaatgtct
caatgtctgcgcattaagcatgttcatgcagatgggatgaaagaagtgaaagtaactttc
tatccaaactctgatattgacagcaataaagaaccctatgaacccacagttagcttgtta
aaccagaagtggagtacacctgacatgcaaaagcttgcaaattcattggcatgctgccct
gccttgtctttgttggatttgtctggaggcctgtgggatgttgaaattctgaagacactg
actcaggttctgccaaagttccacatcaccaaatatgtcaagttgaatgacagctgctcc
tcagtgaatggtttggtggttctcactgctctactgtccctttgtcctaatgtggtggag
ctgcatatcagacttcagcccagcagaggccctaagcagatttctattgtgttctctgaa
aaaacagaaaagccagcagttaaaatgactaaaagactgagcctcaactgctgtggtctg
ctgccagctgatttagacagagtgtggcaaagtttgggaacgtcttctgatctcactgtg
ctggatctgtccagtaaccgtttaggcaacaaaagtctgaagaaactgttgcatatcctg
cctcgacttcacagtattcaggaaattgatgccagtaaaaatggcatcagcatgaaagca
gtgttcacattggctgaagccttctgctcctgtaacaatttaacacaaattcacgtcagc
gatggaggccaaaaccaggtgctgttgaagttctccccagatataagctataaaaaactg
caactcaagatatttaggataaaccacagcaccctgctgccatctgatatagcctcactg
tgcaataaattggcccagtgtgattccagcatggagttggatttgtctcatagcccgttg
agtgatcaggctgttaagaatctgcttgagcttcttcctaagatgaagtccctgcggaaa
cttaatatcagccacagcatcacatccacaacaggagcattaatgttggtcagtggtttc
actggcaaccagcgagtaacatcagtggagcttagtcatcagagtgagtcctttgtccat
tttgacatcgtgaaagcagaacaaaccagctgcaggttaactgattttaacctgaactgt
accgacttggagcaactgctacagattctgcagcaaggtcccagactatctaacctagat
ttgtcaagtaaccaactggatgatgaagctgtgaagtgtcttgttggtttcctaccaagc
cttccaataaaaaactgtatcaatctcagcaataacaacctgagtcagcagggtttattg
gatgtggccagcaccttgtctgaccgtggtaacgtttctggtgcagacgtcagtagtctg
ggaccagaaaagagatgcctcatctggttcagacaatatgaaagttgtgaaaaaacactg
agtgttagagacagtggtttgaaacatgaacatctggtccgattagcggagattgtgtcc
agctgctccagtccaatcaaactgctgttgaaagacaattctctgcaggcggagtggatt
caggattttgttaaggcactgaacagagactgcagtgagtgcagtgtgagcattaaggag
gactggattggagcagaggaagctgttcgtttaatgtgtgtctgtctggttcttaatacg
aacattgtatctctcagggtgcaccagaactcactacacctgtcagtaacttcagtcagc
attaattctagagaccccaacccatcactgaccacagagaaaataggcctcattgactgt
gcagttcatggtcaccggcttgcacatatgaggagcatcatccagaagtgtcctctgctg
acagagcttgacctggatatagaggcagctgagtttctctgctgtgttttgcctttgttg
ccaaatctcagttctctcagcattagctccaaagacacttgcccagacttgcttgagaat
ctggcagaggtcttggtgcagtccacaagcattcagaacctaaatctttcaggatatgtg
attgaagacgcagcagctcagattatgaccagaatgtttccccgtctactatcattgaat
ctgtctcattgtaaagggtcagcgactgcgcggctgcagctcagtgaagcactgggggag
tgtgtcagtctggaaggcctatgtctggacctgtatgaagacaacagagtttgtttagca
cgagccataaggaaaaacaagtccttacgcagtctcaagcttaatagcattcctatggaa
ccaccagcagttgatggtgtgcttgatcttcttggtgctatggatggactcacacaagtg
gagaacattgaattagagagctggaggatggcagaaataggagcagagcagttaaccaag
cttctccctgtgtggacagggctcagaaaaatcagtctttcaaataacctcataagtgac
cactcaggagacaagttactggaggctttgatcagctgtagtcaccttgaggagctccac
ctgtctagcaaccgtctcggtgacctcacagctacaaggatggctctagttctaccgtca
ctgacccacatcactgtgttggacatttcagagaacagtttcggatgtgaaggcgcagtg
agtctgtccaaagcaataatgtgtatgaagaaactcaccaagattaatctgacctctatt
gggacttcagagctgtgtcctatagctgccagcctggcccactgccccctcattcaggat
gtgaatttgggatggaataactgtgaagataacgttgcactggaactggccagagtttta
ccttcatatcagaagttgacaagaatagatcttgagtcaaactgtgtgagtgccgtggga
gtggaagccctggtgaaaatggtgaagtcttgtcctgctctgcagctcatcaggctatgg
aggaacaaagtctctccaatagaagcccagaggctcagtgacaaggacaggaggctgaat
ttctcccccacctaa
DBGET
integrated database retrieval system
