Betta splendens (Siamese fighting fish): 114857050
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Entry
114857050 CDS
T08231
Symbol
lrrc4ca
Name
(RefSeq) leucine rich repeat containing 4C, genome duplicate a
KO
K07523
netrin-G1 ligand
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
114857050 (lrrc4ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bspl04515
]
114857050 (lrrc4ca)
Cell adhesion molecules [BR:
bspl04515
]
Immunoglobulin superfamily
NGL family
114857050 (lrrc4ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
DUF7617
Ig_6
Sp38
DUF4293
DUF6821
Syndecan
Motif
Other DBs
NCBI-GeneID:
114857050
NCBI-ProteinID:
XP_029008962
UniProt:
A0A6P7MRW5
LinkDB
All DBs
Position
6:8479634..8574150
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AA seq
649 aa
AA seq
DB search
MLNKMTSSQQQQMMRGPRWNRALSDPLFVLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLREVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRKIELGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVKLDELEMSGNQLSVIRPGSF
KGLIHLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPTQHKGRYIGELDQNHFHCYAPVIVEP
PADLNVTEGSAAELKCRASSLTSVSWITPNGSIMTHGAYKVRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETIETPHNEVFTTTVHQRVGP
TSSAGTWEFISPTSTTTTTTTARTPLSTRATEKTYTIPVTELGEGSLNGLDEVMKTTKII
IGCFVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGAGMEGHLTLP
PLEHEHLNHYNTYKTAYNHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacaagatgacctcctctcagcagcagcagatgatgagaggtcctaggtggaac
cgggccctgtccgaccctttgttcgtgctgctcctggctctccagctgctggtggtggcg
gggctggtgcgcgcccagacgtgcccctccgtctgctcctgcagcaaccagttcagcaag
gtcatctgcacccgccggggcctgcgggaggtgcccgatggcatctcgaccaacacgcgc
tacctgaacctgcaggagaacctcatccaggtcataaaggtggacagcttcaagcacctg
aggcacctagagatcctgcagctgagcaaaaaccacatacgcaagatcgagctgggcgcc
ttcaacggactggccagcctcaataccttggagctctttgataatcgcctcaccaccatc
ccgaacggggcgtttgagtacctgtccaaactaaaggagctttggctgaggaataacccc
atagagagcattccctcctatgctttcaacagagtgccctcattacgacggctggacctc
ggggagctcaagcggctctcctacatatctgagggggcctttgaagggctgagcaatctg
cgctacttaaacctgggaatgtgcaatctgaaggaaattcccaatctcattcccctggtg
aagctggacgaactagagatgtcagggaaccagctgtccgtcatccgccccggctccttt
aaagggctcatccacctgcagaagctgtggatgatgcacgcccagatccagaccatcgag
aggaactccttcgatgacctgcagtcgctggtggagctcaacctggcccacaacaacctc
accctcctcccccacgacctcttcactcccctgcatcacctggagagggtgcacttgcac
cacaacccgtggaactgtaactgtgacatcctgtggctgagctggtggctcaaggagatg
gtgcccgccaacaccagctgctgcgcccgctgcagctcgccaacccagcacaagggccgc
tacatcggcgagctggaccagaaccatttccactgttacgctcccgttattgtggagccg
cccgcggacctgaacgtgacggagggcagcgccgccgagctgaaatgccgcgccagctcg
ttgacctcggtgagctggatcacccccaacggctccatcatgacgcacggcgcctacaag
gtccggatctccgtgctgaacgacggcaccctgaacttcaccaacgtcacaatgcaggac
acgggcacgtacacgtgcatggttagcaactccgcgggtaacaccacggcctcggccacg
ctcaacgtgtcgtcgacggagaacagcagcttcagctacttcaccacggtgacggtggag
accatcgagacgccgcataacgaagtgttcaccaccacagtgcaccagagggtgggcccc
acctcctcggcgggcacctgggagttcatctcgcccacctccaccaccaccaccaccacc
acggcccggacgccgctctccacccgcgccaccgagaagacgtacaccatccccgtcacg
gagctgggcgagggctcgctgaacggcctggacgaggtgatgaagaccaccaagatcatc
atcggctgcttcgtggccatcacgctcatggcggccgtcatgctcatcatcttctacaag
atgcgcaagcagcaccaccagcagaaccaccacgcgcccacgcgcaccatcgagatcatc
aacgtggacgaggactgcgtgacgggcggcgccggcatggagggccacctgacgctgccg
ccgctggagcacgagcacctcaaccactacaacacctataagactgcgtacaaccacgcc
tccaccatcaactccatacacagctcggcgcacgaacctttgttaatccgggccagctcg
aaagacaatgtacaagagactcaaatctaa
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integrated database retrieval system
